RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-208ENST00000599343 HLTFQ14527 1009 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCN8A-208ENST00000599343 TNIP1Q15025 636 aa13.72□□□□□ -0.21
SCN8A-208ENST00000599343 YEATS4O95619 227 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.21
SCN8A-208ENST00000599343 ISM2Q6H9L7 571 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 LIG1P18858 919 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 SPECC1Q5M775 1068 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 CRACR2BQ8N4Y2 399 aaPredicted RBP13.71□□□□□ -0.21
SCN8A-208ENST00000599343 CEP63Q96MT8 703 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 SLC12A7Q9Y666 1083 aa13.71□□□□□ -0.21
SCN8A-208ENST00000599343 CFTRP13569 1480 aa13.71□□□□□ -0.22
SCN8A-208ENST00000599343 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
SCN8A-208ENST00000599343 SSRP1Q08945 709 aaKnown RBP13.71□□□□□ -0.22
SCN8A-208ENST00000599343 SH2B1Q9NRF2 756 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-208ENST00000599343 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.22
SCN8A-208ENST00000599343 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.22
SCN8A-208ENST00000599343 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 STAMBPO95630 424 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 AKAP2Q9Y2D5 859 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 GPATCH11Q8N954 259 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 SMARCC1Q92922 1105 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 GOLGA8BA8MQT2 603 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 ADCY5O95622 1261 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 CTR9Q6PD62 1173 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 IPO4Q8TEX9 1081 aaKnown RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 F6X3S4 739 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC144CPQ8IYA2 1237 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 MTIF2P46199 727 aaKnown RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 MICALCLQ6ZW33 695 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 CTCFLQ8NI51 663 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-208ENST00000599343 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
SCN8A-208ENST00000599343 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
SCN8A-208ENST00000599343 NLRP5P59047 1200 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
SCN8A-208ENST00000599343 HOOK3Q86VS8 718 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 PANK2Q9BZ23 570 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 GJB2P29033 226 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 ZSWIM4Q9H7M6 989 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-208ENST00000599343 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
SCN8A-208ENST00000599343 MAATS1Q7Z4T9 603 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 CALCOCO1Q9P1Z2 691 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 SSH1Q8WYL5 1049 aa13.69□□□□□ -0.22
SCN8A-208ENST00000599343 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
SCN8A-208ENST00000599343 ZNF213O14771 459 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC175P0C221 793 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 RBM25P49756 843 aaKnown RBP13.68□□□□□ -0.22
SCN8A-208ENST00000599343 CAVIN4Q5BKX8 364 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
SCN8A-208ENST00000599343 LIMCH1Q9UPQ0 1083 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 HFM1A2PYH4 1435 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 CTAGE5O15320 804 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 CTNNA2P26232 953 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 PPP4R3AQ6IN85 833 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 FGFR1OPO95684 399 aaKnown RBP13.68□□□□□ -0.22
SCN8A-208ENST00000599343 TMEM266Q2M3C6 531 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 ZNF287Q9HBT7 754 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 LMAN1P49257 510 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 RAB11FIP4Q86YS3 637 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
SCN8A-208ENST00000599343 DZIP1Q86YF9 867 aaKnown RBP13.68□□□□□ -0.22
SCN8A-208ENST00000599343 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
SCN8A-208ENST00000599343 STARD3NLO95772 234 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
SCN8A-208ENST00000599343 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 PLEKHH1Q9ULM0 1364 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC194A0A1B0GVG4 234 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 STX1AQ16623 288 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 RARSP54136 660 aaKnown RBP13.67□□□□□ -0.22
SCN8A-208ENST00000599343 ZNF444Q8N0Y2 327 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-208ENST00000599343 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-208ENST00000599343 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
SCN8A-208ENST00000599343 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 ATP2C2O75185 946 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 NOP2P46087 812 aaKnown RBP13.66□□□□□ -0.22
SCN8A-208ENST00000599343 PPM1FP49593 454 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC40Q4G0X9 1142 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
SCN8A-208ENST00000599343 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
SCN8A-208ENST00000599343 C9orf84Q5VXU9 1444 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 MAP3K12Q12852 859 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
SCN8A-208ENST00000599343 GSDMDP57764 484 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 IQCA1Q86XH1 822 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms