RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 SLC4A9Q96Q91 983 aa28.06■■■□□ 2.08
LTBP4-224ENST00000599016 STK31Q9BXU1 1019 aa28.06■■■□□ 2.08
LTBP4-224ENST00000599016 PLSCR1O15162 318 aa28.05■■■□□ 2.08
LTBP4-224ENST00000599016 STARD3NLO95772 234 aa28.05■■■□□ 2.08
LTBP4-224ENST00000599016 DNAJC10Q8IXB1 793 aa28.05■■■□□ 2.08
LTBP4-224ENST00000599016 NECTIN2Q92692 538 aa28.05■■■□□ 2.08
LTBP4-224ENST00000599016 CCNL1Q9UK58 526 aaPredicted RBP28.05■■■□□ 2.08
LTBP4-224ENST00000599016 USP16Q9Y5T5 823 aa28.05■■■□□ 2.08
LTBP4-224ENST00000599016 RGPD3A6NKT7 1758 aaPredicted RBP28.04■■■□□ 2.08
LTBP4-224ENST00000599016 RGPD4Q7Z3J3 1758 aa28.04■■■□□ 2.08
LTBP4-224ENST00000599016 HMGB2P26583 209 aaKnown RBP28.03■■■□□ 2.08
LTBP4-224ENST00000599016 SMC4Q9NTJ3 1288 aa28.03■■■□□ 2.08
LTBP4-224ENST00000599016 NBPF14Q5TI25 921 aa28.02■■■□□ 2.08
LTBP4-224ENST00000599016 SSH1Q8WYL5 1049 aa28.02■■■□□ 2.08
LTBP4-224ENST00000599016 COL5A3P25940 1745 aaPredicted RBP28.01■■■□□ 2.07
LTBP4-224ENST00000599016 ERBB4Q15303 1308 aa28.01■■■□□ 2.07
LTBP4-224ENST00000599016 SLC27A3Q5K4L6 730 aa28.01■■■□□ 2.07
LTBP4-224ENST00000599016 SPON1Q9HCB6 807 aa28.01■■■□□ 2.07
LTBP4-224ENST00000599016 TAF1LQ8IZX4 1826 aa28.01■■■□□ 2.07
LTBP4-224ENST00000599016 NUP188Q5SRE5 1749 aa28.01■■■□□ 2.07
LTBP4-224ENST00000599016 RREB1Q92766 1687 aa28■■■□□ 2.07
LTBP4-224ENST00000599016 TCERG1O14776 1098 aaKnown RBP28■■■□□ 2.07
LTBP4-224ENST00000599016 DBF4Q9UBU7 674 aaPredicted RBP28■■■□□ 2.07
LTBP4-224ENST00000599016 PPP1R1BQ9UD71 204 aaPredicted RBP28■■■□□ 2.07
LTBP4-224ENST00000599016 CYP19A1P11511 503 aaPredicted RBP27.99■■■□□ 2.07
LTBP4-224ENST00000599016 ITPK1Q13572 414 aa27.99■■■□□ 2.07
LTBP4-224ENST00000599016 BCL2L13Q9BXK5 485 aa27.99■■■□□ 2.07
LTBP4-224ENST00000599016 SLC4A2P04920 1241 aa27.98■■■□□ 2.07
LTBP4-224ENST00000599016 MRPL50Q8N5N7 158 aaKnown RBP27.98■■■□□ 2.07
LTBP4-224ENST00000599016 CHPF2Q9P2E5 772 aa27.98■■■□□ 2.07
LTBP4-224ENST00000599016 BCAR3O75815 825 aa27.97■■■□□ 2.07
LTBP4-224ENST00000599016 TXNRD1Q16881 649 aa27.97■■■□□ 2.07
LTBP4-224ENST00000599016 PDGFDQ9GZP0 370 aaPredicted RBP27.97■■■□□ 2.07
LTBP4-224ENST00000599016 DDX21Q9NR30 783 aaKnown RBP eCLIP27.97■■■□□ 2.07
LTBP4-224ENST00000599016 BRPF1P55201 1214 aaPredicted RBP27.96■■■□□ 2.07
LTBP4-224ENST00000599016 HYPKQ9NX55 129 aa27.96■■■□□ 2.07
LTBP4-224ENST00000599016 KIF16BQ96L93 1317 aa27.95■■■□□ 2.07
LTBP4-224ENST00000599016 A1BGP04217 495 aa27.95■■■□□ 2.06
LTBP4-224ENST00000599016 KCNQ4P56696 695 aa27.95■■■□□ 2.06
LTBP4-224ENST00000599016 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.95■■■□□ 2.06
LTBP4-224ENST00000599016 CCDC87Q9NVE4 849 aa27.95■■■□□ 2.06
LTBP4-224ENST00000599016 CRKLP46109 303 aaKnown RBP27.94■■■□□ 2.06
LTBP4-224ENST00000599016 LINC00116Q8NCU8 138 aa27.94■■■□□ 2.06
LTBP4-224ENST00000599016 ANO8Q9HCE9 1232 aaPredicted RBP27.93■■■□□ 2.06
LTBP4-224ENST00000599016 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
LTBP4-224ENST00000599016 MYH14Q7Z406 1995 aaKnown RBP27.92■■■□□ 2.06
LTBP4-224ENST00000599016 MYL6BP14649 208 aa27.92■■■□□ 2.06
LTBP4-224ENST00000599016 CANXP27824 592 aaKnown RBP27.92■■■□□ 2.06
LTBP4-224ENST00000599016 PDIA6Q15084 440 aa27.92■■■□□ 2.06
LTBP4-224ENST00000599016 RC3H1Q5TC82 1133 aaKnown RBP27.92■■■□□ 2.06
LTBP4-224ENST00000599016 LRRC4BQ9NT99 713 aa27.92■■■□□ 2.06
LTBP4-224ENST00000599016 IPO8O15397 1037 aaKnown RBP27.91■■■□□ 2.06
LTBP4-224ENST00000599016 FRAT1Q92837 279 aaPredicted RBP27.91■■■□□ 2.06
LTBP4-224ENST00000599016 SUPT16HQ9Y5B9 1047 aaKnown RBP27.91■■■□□ 2.06
LTBP4-224ENST00000599016 C4BP0C0L5 1744 aa27.91■■■□□ 2.06
LTBP4-224ENST00000599016 ANXA1P04083 346 aa27.9■■■□□ 2.06
LTBP4-224ENST00000599016 PROSER3Q2NL68 480 aa27.9■■■□□ 2.06
LTBP4-224ENST00000599016 NPM2Q86SE8 214 aaKnown RBP27.9■■■□□ 2.06
LTBP4-224ENST00000599016 PROM2Q8N271 834 aa27.9■■■□□ 2.06
LTBP4-224ENST00000599016 NBPF26B4DH59 902 aa27.89■■■□□ 2.06
LTBP4-224ENST00000599016 PIP4K2AP48426 406 aaPredicted RBP27.89■■■□□ 2.06
LTBP4-224ENST00000599016 NBPF10Q6P3W6 841 aaKnown RBP27.89■■■□□ 2.06
LTBP4-224ENST00000599016 NBPF15Q8N660 670 aa27.89■■■□□ 2.06
LTBP4-224ENST00000599016 NOB1Q9ULX3 412 aaKnown RBP27.89■■■□□ 2.06
LTBP4-224ENST00000599016 ZBTB1Q9Y2K1 713 aa27.89■■■□□ 2.06
LTBP4-224ENST00000599016 FLIIQ13045 1269 aa27.88■■■□□ 2.05
LTBP4-224ENST00000599016 INTS5Q6P9B9 1019 aaKnown RBP27.88■■■□□ 2.05
LTBP4-224ENST00000599016 PTPRCP08575 1304 aa27.88■■■□□ 2.05
LTBP4-224ENST00000599016 IL6STP40189 918 aaPredicted RBP27.87■■■□□ 2.05
LTBP4-224ENST00000599016 RRP1P56182 461 aaKnown RBP27.87■■■□□ 2.05
LTBP4-224ENST00000599016 ZKSCAN2Q63HK3 967 aa27.87■■■□□ 2.05
LTBP4-224ENST00000599016 G2E3Q7L622 706 aa27.87■■■□□ 2.05
LTBP4-224ENST00000599016 PHAXQ9H814 394 aaKnown RBP27.87■■■□□ 2.05
LTBP4-224ENST00000599016 ARHGAP45Q92619 1136 aa27.86■■■□□ 2.05
LTBP4-224ENST00000599016 AK7Q96M32 723 aa27.86■■■□□ 2.05
LTBP4-224ENST00000599016 ZNF330Q9Y3S2 320 aaPredicted RBP27.86■■■□□ 2.05
LTBP4-224ENST00000599016 FKBP5Q13451 457 aaPredicted RBP27.85■■■□□ 2.05
LTBP4-224ENST00000599016 API5Q9BZZ5 524 aaKnown RBP27.85■■■□□ 2.05
LTBP4-224ENST00000599016 DCAF8L1A6NGE4 600 aa27.84■■■□□ 2.05
LTBP4-224ENST00000599016 ZBTB7AO95365 584 aa27.84■■■□□ 2.05
LTBP4-224ENST00000599016 DDX58O95786 925 aaKnown RBP27.84■■■□□ 2.05
LTBP4-224ENST00000599016 AIMP1Q12904 312 aaKnown RBP27.84■■■□□ 2.05
LTBP4-224ENST00000599016 ZNF784Q8NCA9 323 aaPredicted RBP27.84■■■□□ 2.05
LTBP4-224ENST00000599016 XAGE3Q8WTP9 111 aa27.84■■■□□ 2.05
LTBP4-224ENST00000599016 GNPATO15228 680 aa27.83■■■□□ 2.05
LTBP4-224ENST00000599016 RPS6KA4O75676 772 aa27.83■■■□□ 2.05
LTBP4-224ENST00000599016 MS4A1P11836 297 aa27.83■■■□□ 2.05
LTBP4-224ENST00000599016 COPS6Q7L5N1 327 aa27.83■■■□□ 2.05
LTBP4-224ENST00000599016 LRP10Q7Z4F1 713 aa27.83■■■□□ 2.05
LTBP4-224ENST00000599016 RNF123Q5XPI4 1314 aa27.83■■■□□ 2.05
LTBP4-224ENST00000599016 PLIN1O60240 522 aa27.82■■■□□ 2.04
LTBP4-224ENST00000599016 EIF5P55010 431 aaKnown RBP27.82■■■□□ 2.04
LTBP4-224ENST00000599016 ATF7IPQ6VMQ6 1270 aa27.82■■■□□ 2.04
LTBP4-224ENST00000599016 RTCBQ9Y3I0 505 aaKnown RBP27.82■■■□□ 2.04
LTBP4-224ENST00000599016 A0A087WZG4 1122 aa27.81■■■□□ 2.04
LTBP4-224ENST00000599016 PTGER2P43116 358 aa27.81■■■□□ 2.04
LTBP4-224ENST00000599016 KIF6Q6ZMV9 814 aa27.8■■■□□ 2.04
LTBP4-224ENST00000599016 ATF5Q9Y2D1 282 aaPredicted RBP27.8■■■□□ 2.04
LTBP4-224ENST00000599016 UBR3Q6ZT12 1888 aa27.8■■■□□ 2.04
LTBP4-224ENST00000599016 COL15A1P39059 1388 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms