RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-228ENST00000597828 TGFB2P61812 414 aa16.41■□□□□ 0.22
SOX2-OT-228ENST00000597828 SOS1Q07889 1333 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-228ENST00000597828 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
SOX2-OT-228ENST00000597828 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
SOX2-OT-228ENST00000597828 COL15A1P39059 1388 aa16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 FCHSD2O94868 740 aa16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 KCNA3P22001 575 aa16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SOX2-OT-228ENST00000597828 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
SOX2-OT-228ENST00000597828 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
SOX2-OT-228ENST00000597828 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-228ENST00000597828 KIF3CO14782 793 aa16.36■□□□□ 0.21
SOX2-OT-228ENST00000597828 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-228ENST00000597828 CHRNA5P30532 468 aa16.36■□□□□ 0.21
SOX2-OT-228ENST00000597828 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
SOX2-OT-228ENST00000597828 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
SOX2-OT-228ENST00000597828 TM4SF1P30408 202 aa16.34■□□□□ 0.21
SOX2-OT-228ENST00000597828 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
SOX2-OT-228ENST00000597828 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
SOX2-OT-228ENST00000597828 ZPR1O75312 459 aa16.33■□□□□ 0.2
SOX2-OT-228ENST00000597828 SLX4Q8IY92 1834 aa16.33■□□□□ 0.2
SOX2-OT-228ENST00000597828 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
SOX2-OT-228ENST00000597828 NUP98P52948 1817 aa16.32■□□□□ 0.2
SOX2-OT-228ENST00000597828 NFIXQ14938 502 aa16.32■□□□□ 0.2
SOX2-OT-228ENST00000597828 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
SOX2-OT-228ENST00000597828 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
SOX2-OT-228ENST00000597828 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
SOX2-OT-228ENST00000597828 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
SOX2-OT-228ENST00000597828 HSPA6P17066 643 aa16.31■□□□□ 0.2
SOX2-OT-228ENST00000597828 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
SOX2-OT-228ENST00000597828 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
SOX2-OT-228ENST00000597828 C9orf131Q5VYM1 1079 aa16.3■□□□□ 0.2
SOX2-OT-228ENST00000597828 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
SOX2-OT-228ENST00000597828 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
SOX2-OT-228ENST00000597828 ZNF496Q96IT1 587 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-228ENST00000597828 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
SOX2-OT-228ENST00000597828 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
SOX2-OT-228ENST00000597828 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
SOX2-OT-228ENST00000597828 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
SOX2-OT-228ENST00000597828 KCNQ3O43525 872 aa16.28■□□□□ 0.2
SOX2-OT-228ENST00000597828 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
SOX2-OT-228ENST00000597828 RASSF7Q02833 373 aa16.28■□□□□ 0.2
SOX2-OT-228ENST00000597828 TEFQ10587 303 aa16.28■□□□□ 0.2
SOX2-OT-228ENST00000597828 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
SOX2-OT-228ENST00000597828 SERPINB2P05120 415 aa16.27■□□□□ 0.2
SOX2-OT-228ENST00000597828 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
SOX2-OT-228ENST00000597828 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
SOX2-OT-228ENST00000597828 RNF181Q9P0P0 153 aa16.27■□□□□ 0.2
SOX2-OT-228ENST00000597828 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-228ENST00000597828 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
SOX2-OT-228ENST00000597828 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
SOX2-OT-228ENST00000597828 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
SOX2-OT-228ENST00000597828 STARD3NLO95772 234 aa16.24■□□□□ 0.19
SOX2-OT-228ENST00000597828 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
SOX2-OT-228ENST00000597828 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-228ENST00000597828 PRELPP51888 382 aa16.24■□□□□ 0.19
SOX2-OT-228ENST00000597828 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
SOX2-OT-228ENST00000597828 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
SOX2-OT-228ENST00000597828 A1BGP04217 495 aa16.23■□□□□ 0.19
SOX2-OT-228ENST00000597828 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
SOX2-OT-228ENST00000597828 BTBD11A6QL63 1104 aa16.22■□□□□ 0.19
SOX2-OT-228ENST00000597828 TOMM70O94826 608 aa16.22■□□□□ 0.19
SOX2-OT-228ENST00000597828 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
SOX2-OT-228ENST00000597828 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
SOX2-OT-228ENST00000597828 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-228ENST00000597828 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
SOX2-OT-228ENST00000597828 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
SOX2-OT-228ENST00000597828 MCM10Q7L590 875 aa16.21■□□□□ 0.19
SOX2-OT-228ENST00000597828 A0A087WZG4 1122 aa16.2■□□□□ 0.18
SOX2-OT-228ENST00000597828 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-228ENST00000597828 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
SOX2-OT-228ENST00000597828 ANKRD36CQ5JPF3 1778 aa16.2■□□□□ 0.18
SOX2-OT-228ENST00000597828 LAMB2P55268 1798 aa16.19■□□□□ 0.18
SOX2-OT-228ENST00000597828 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
SOX2-OT-228ENST00000597828 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
SOX2-OT-228ENST00000597828 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
SOX2-OT-228ENST00000597828 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
SOX2-OT-228ENST00000597828 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
SOX2-OT-228ENST00000597828 H0YIN7 160 aa16.18■□□□□ 0.18
SOX2-OT-228ENST00000597828 NFKBIEO00221 500 aa16.18■□□□□ 0.18
SOX2-OT-228ENST00000597828 HTRA3P83110 453 aa16.18■□□□□ 0.18
SOX2-OT-228ENST00000597828 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-228ENST00000597828 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-228ENST00000597828 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
SOX2-OT-228ENST00000597828 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
SOX2-OT-228ENST00000597828 LMNB1P20700 586 aa16.16■□□□□ 0.18
SOX2-OT-228ENST00000597828 APLP1P51693 650 aa16.16■□□□□ 0.18
SOX2-OT-228ENST00000597828 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-228ENST00000597828 RBM46Q8TBY0 533 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-228ENST00000597828 ZNF622Q969S3 477 aaKnown RBP eCLIP16.16■□□□□ 0.18
SOX2-OT-228ENST00000597828 SCN4AP35499 1836 aa16.16■□□□□ 0.18
SOX2-OT-228ENST00000597828 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-228ENST00000597828 C21orf2O43822 256 aa16.14■□□□□ 0.17
SOX2-OT-228ENST00000597828 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
SOX2-OT-228ENST00000597828 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
SOX2-OT-228ENST00000597828 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms