RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.52
IRF3-218ENST00000597369 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
IRF3-218ENST00000597369 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
IRF3-218ENST00000597369 FER1L6Q2WGJ9 1857 aa18.33■□□□□ 0.52
IRF3-218ENST00000597369 PHKG2P15735 406 aa18.32■□□□□ 0.52
IRF3-218ENST00000597369 ERFEQ4G0M1 354 aa18.32■□□□□ 0.52
IRF3-218ENST00000597369 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
IRF3-218ENST00000597369 TONSLQ96HA7 1378 aa18.31■□□□□ 0.52
IRF3-218ENST00000597369 WDR33Q9C0J8 1336 aaKnown RBP18.31■□□□□ 0.52
IRF3-218ENST00000597369 IQCA1LA6NCM1 817 aa18.3■□□□□ 0.52
IRF3-218ENST00000597369 ADAMTS7Q9UKP4 1686 aa18.29■□□□□ 0.52
IRF3-218ENST00000597369 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
IRF3-218ENST00000597369 DDNO94850 711 aaPredicted RBP18.29■□□□□ 0.52
IRF3-218ENST00000597369 FYB1O15117 783 aa18.28■□□□□ 0.52
IRF3-218ENST00000597369 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
IRF3-218ENST00000597369 CRKLP46109 303 aaKnown RBP18.27■□□□□ 0.52
IRF3-218ENST00000597369 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
IRF3-218ENST00000597369 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.52
IRF3-218ENST00000597369 LTBP3Q9NS15 1303 aa18.26■□□□□ 0.51
IRF3-218ENST00000597369 H0YIN7 160 aa18.25■□□□□ 0.51
IRF3-218ENST00000597369 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
IRF3-218ENST00000597369 BEGAINQ9BUH8 593 aa18.25■□□□□ 0.51
IRF3-218ENST00000597369 ADAMTSL1Q8N6G6 1762 aa18.25■□□□□ 0.51
IRF3-218ENST00000597369 ZPR1O75312 459 aa18.24■□□□□ 0.51
IRF3-218ENST00000597369 C2CD5Q86YS7 1000 aa18.24■□□□□ 0.51
IRF3-218ENST00000597369 MCOLN1Q9GZU1 580 aa18.24■□□□□ 0.51
IRF3-218ENST00000597369 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
IRF3-218ENST00000597369 CASP8AP2Q9UKL3 1982 aa18.24■□□□□ 0.51
IRF3-218ENST00000597369 NFIXQ14938 502 aa18.22■□□□□ 0.51
IRF3-218ENST00000597369 USPL1Q5W0Q7 1092 aa18.22■□□□□ 0.51
IRF3-218ENST00000597369 SERPINB2P05120 415 aa18.21■□□□□ 0.51
IRF3-218ENST00000597369 C21orf2O43822 256 aa18.2■□□□□ 0.5
IRF3-218ENST00000597369 PRPF38BQ5VTL8 546 aaKnown RBP18.2■□□□□ 0.5
IRF3-218ENST00000597369 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
IRF3-218ENST00000597369 CNTROBQ8N137 903 aa18.2■□□□□ 0.5
IRF3-218ENST00000597369 EYA1Q99502 592 aa18.2■□□□□ 0.5
IRF3-218ENST00000597369 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
IRF3-218ENST00000597369 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
IRF3-218ENST00000597369 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
IRF3-218ENST00000597369 ECE1P42892 770 aa18.19■□□□□ 0.5
IRF3-218ENST00000597369 TJP1Q07157 1748 aa18.19■□□□□ 0.5
IRF3-218ENST00000597369 GPR101Q96P66 508 aaPredicted RBP18.19■□□□□ 0.5
IRF3-218ENST00000597369 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
IRF3-218ENST00000597369 ABT1Q9ULW3 272 aaKnown RBP18.19■□□□□ 0.5
IRF3-218ENST00000597369 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
IRF3-218ENST00000597369 EAPPQ56P03 285 aaPredicted RBP18.18■□□□□ 0.5
IRF3-218ENST00000597369 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
IRF3-218ENST00000597369 NARFQ9UHQ1 456 aa18.18■□□□□ 0.5
IRF3-218ENST00000597369 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
IRF3-218ENST00000597369 CA12O43570 354 aa18.17■□□□□ 0.5
IRF3-218ENST00000597369 CAPNS2Q96L46 248 aa18.17■□□□□ 0.5
IRF3-218ENST00000597369 HACL1Q9UJ83 578 aa18.17■□□□□ 0.5
IRF3-218ENST00000597369 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
IRF3-218ENST00000597369 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
IRF3-218ENST00000597369 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 LTBP1Q14766 1721 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 MAP2K2P36507 400 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 CABP4P57796 275 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 CARMIL3Q8ND23 1372 aa18.16■□□□□ 0.5
IRF3-218ENST00000597369 EPHX2P34913 555 aa18.15■□□□□ 0.5
IRF3-218ENST00000597369 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
IRF3-218ENST00000597369 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
IRF3-218ENST00000597369 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
IRF3-218ENST00000597369 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
IRF3-218ENST00000597369 MAP1SQ66K74 1059 aaPredicted RBP18.14■□□□□ 0.49
IRF3-218ENST00000597369 BCL2L12Q9HB09 334 aa18.14■□□□□ 0.49
IRF3-218ENST00000597369 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
IRF3-218ENST00000597369 PDE6BP35913 854 aa18.13■□□□□ 0.49
IRF3-218ENST00000597369 DGKZQ13574 1117 aa18.13■□□□□ 0.49
IRF3-218ENST00000597369 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
IRF3-218ENST00000597369 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
IRF3-218ENST00000597369 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
IRF3-218ENST00000597369 TSKSQ9UJT2 592 aa18.13■□□□□ 0.49
IRF3-218ENST00000597369 TRPM7Q96QT4 1865 aa18.13■□□□□ 0.49
IRF3-218ENST00000597369 CYP4F22Q6NT55 531 aa18.12■□□□□ 0.49
IRF3-218ENST00000597369 TESK2Q96S53 571 aa18.12■□□□□ 0.49
IRF3-218ENST00000597369 COL11A2P13942 1736 aaPredicted RBP18.12■□□□□ 0.49
IRF3-218ENST00000597369 ARFGEF2Q9Y6D5 1785 aa18.11■□□□□ 0.49
IRF3-218ENST00000597369 NFATC2IPQ8NCF5 419 aa18.1■□□□□ 0.49
IRF3-218ENST00000597369 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
IRF3-218ENST00000597369 COL15A1P39059 1388 aa18.09■□□□□ 0.49
IRF3-218ENST00000597369 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
IRF3-218ENST00000597369 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
IRF3-218ENST00000597369 PPM1GO15355 546 aaPredicted RBP18.08■□□□□ 0.48
IRF3-218ENST00000597369 TLL2Q9Y6L7 1015 aa18.08■□□□□ 0.48
IRF3-218ENST00000597369 ZNF541Q9H0D2 1346 aa18.07■□□□□ 0.48
IRF3-218ENST00000597369 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
IRF3-218ENST00000597369 PLEKHO1Q53GL0 409 aaPredicted RBP18.07■□□□□ 0.48
IRF3-218ENST00000597369 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
IRF3-218ENST00000597369 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
IRF3-218ENST00000597369 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
IRF3-218ENST00000597369 AOC2O75106 756 aa18.06■□□□□ 0.48
IRF3-218ENST00000597369 MTHFSP49914 203 aa18.06■□□□□ 0.48
IRF3-218ENST00000597369 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
IRF3-218ENST00000597369 GRM1Q13255 1194 aa18.06■□□□□ 0.48
IRF3-218ENST00000597369 CST9Q5W186 159 aa18.06■□□□□ 0.48
IRF3-218ENST00000597369 STYK1Q6J9G0 422 aa18.06■□□□□ 0.48
IRF3-218ENST00000597369 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms