RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 GNPATO15228 680 aa12.01□□□□□ -0.49
ZNF548-206ENST00000597047 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
ZNF548-206ENST00000597047 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
ZNF548-206ENST00000597047 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
ZNF548-206ENST00000597047 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
ZNF548-206ENST00000597047 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
ZNF548-206ENST00000597047 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
ZNF548-206ENST00000597047 ANXA1P04083 346 aa12□□□□□ -0.49
ZNF548-206ENST00000597047 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
ZNF548-206ENST00000597047 R3HDM1Q15032 1099 aaKnown RBP12□□□□□ -0.49
ZNF548-206ENST00000597047 ZNF827Q17R98 1081 aa12□□□□□ -0.49
ZNF548-206ENST00000597047 HDGFL1Q5TGJ6 251 aa12□□□□□ -0.49
ZNF548-206ENST00000597047 VSIG10Q8N0Z9 540 aa12□□□□□ -0.49
ZNF548-206ENST00000597047 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
ZNF548-206ENST00000597047 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
ZNF548-206ENST00000597047 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
ZNF548-206ENST00000597047 ZBTB1Q9Y2K1 713 aa11.99□□□□□ -0.49
ZNF548-206ENST00000597047 C5P01031 1676 aa11.99□□□□□ -0.49
ZNF548-206ENST00000597047 TAF1LQ8IZX4 1826 aa11.98□□□□□ -0.49
ZNF548-206ENST00000597047 TJP1Q07157 1748 aa11.98□□□□□ -0.49
ZNF548-206ENST00000597047 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
ZNF548-206ENST00000597047 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
ZNF548-206ENST00000597047 RTCBQ9Y3I0 505 aaKnown RBP11.98□□□□□ -0.49
ZNF548-206ENST00000597047 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
ZNF548-206ENST00000597047 TRAPPC3LQ5T215 181 aa11.97□□□□□ -0.49
ZNF548-206ENST00000597047 INTS5Q6P9B9 1019 aaKnown RBP11.97□□□□□ -0.49
ZNF548-206ENST00000597047 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
ZNF548-206ENST00000597047 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
ZNF548-206ENST00000597047 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
ZNF548-206ENST00000597047 RREB1Q92766 1687 aa11.97□□□□□ -0.49
ZNF548-206ENST00000597047 HMGB2P26583 209 aaKnown RBP11.96□□□□□ -0.49
ZNF548-206ENST00000597047 CCDC30Q5VVM6 783 aa11.96□□□□□ -0.49
ZNF548-206ENST00000597047 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
ZNF548-206ENST00000597047 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
ZNF548-206ENST00000597047 TBC1D2BQ9UPU7 963 aa11.96□□□□□ -0.49
ZNF548-206ENST00000597047 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
ZNF548-206ENST00000597047 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
ZNF548-206ENST00000597047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
ZNF548-206ENST00000597047 VAMP4O75379 141 aa11.95□□□□□ -0.5
ZNF548-206ENST00000597047 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
ZNF548-206ENST00000597047 RFC4P35249 363 aa11.95□□□□□ -0.5
ZNF548-206ENST00000597047 PROSER3Q2NL68 480 aa11.95□□□□□ -0.5
ZNF548-206ENST00000597047 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
ZNF548-206ENST00000597047 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
ZNF548-206ENST00000597047 MYH14Q7Z406 1995 aaKnown RBP11.95□□□□□ -0.5
ZNF548-206ENST00000597047 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
ZNF548-206ENST00000597047 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
ZNF548-206ENST00000597047 ZPR1O75312 459 aa11.94□□□□□ -0.5
ZNF548-206ENST00000597047 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
ZNF548-206ENST00000597047 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
ZNF548-206ENST00000597047 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 COL23A1Q86Y22 540 aaPredicted RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 TRMT2AQ8IZ69 625 aaKnown RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 NBPF15Q8N660 670 aa11.94□□□□□ -0.5
ZNF548-206ENST00000597047 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 PDGFDQ9GZP0 370 aaPredicted RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 SRP68Q9UHB9 627 aaKnown RBP11.94□□□□□ -0.5
ZNF548-206ENST00000597047 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
ZNF548-206ENST00000597047 HOXB7P09629 217 aa11.93□□□□□ -0.5
ZNF548-206ENST00000597047 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
ZNF548-206ENST00000597047 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
ZNF548-206ENST00000597047 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
ZNF548-206ENST00000597047 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
ZNF548-206ENST00000597047 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
ZNF548-206ENST00000597047 PHAXQ9H814 394 aaKnown RBP11.93□□□□□ -0.5
ZNF548-206ENST00000597047 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
ZNF548-206ENST00000597047 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 A0A087WZG4 1122 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 SSFA2P28290 1259 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 IL6STP40189 918 aaPredicted RBP11.92□□□□□ -0.5
ZNF548-206ENST00000597047 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 TTLL7Q6ZT98 887 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 COPS6Q7L5N1 327 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 DDX21Q9NR30 783 aaKnown RBP eCLIP11.92□□□□□ -0.5
ZNF548-206ENST00000597047 SMC4Q9NTJ3 1288 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
ZNF548-206ENST00000597047 COL15A1P39059 1388 aa11.92□□□□□ -0.5
ZNF548-206ENST00000597047 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
ZNF548-206ENST00000597047 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 TUBGCP6Q96RT7 1819 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
ZNF548-206ENST00000597047 PDIA6Q15084 440 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 G2E3Q7L622 706 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
ZNF548-206ENST00000597047 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
ZNF548-206ENST00000597047 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
ZNF548-206ENST00000597047 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
ZNF548-206ENST00000597047 FRAT1Q92837 279 aaPredicted RBP11.9□□□□□ -0.5
ZNF548-206ENST00000597047 BCAR3O75815 825 aa11.89□□□□□ -0.51
ZNF548-206ENST00000597047 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
ZNF548-206ENST00000597047 MRPL50Q8N5N7 158 aaKnown RBP11.89□□□□□ -0.51
ZNF548-206ENST00000597047 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 NPHP1O15259 732 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms