RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 PXDNLA1KZ92 1463 aa15.53■□□□□ 0.08
SYMPK-207ENST00000596824 ANKRD31Q8N7Z5 1873 aa15.53■□□□□ 0.08
SYMPK-207ENST00000596824 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
SYMPK-207ENST00000596824 MCM10Q7L590 875 aa15.53■□□□□ 0.08
SYMPK-207ENST00000596824 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
SYMPK-207ENST00000596824 ZBTB1Q9Y2K1 713 aa15.53■□□□□ 0.08
SYMPK-207ENST00000596824 UTRNP46939 3433 aa15.52■□□□□ 0.08
SYMPK-207ENST00000596824 CACNA1SQ13698 1873 aa15.52■□□□□ 0.07
SYMPK-207ENST00000596824 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
SYMPK-207ENST00000596824 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
SYMPK-207ENST00000596824 BTBD11A6QL63 1104 aa15.51■□□□□ 0.07
SYMPK-207ENST00000596824 KCNQ3O43525 872 aa15.51■□□□□ 0.07
SYMPK-207ENST00000596824 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
SYMPK-207ENST00000596824 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
SYMPK-207ENST00000596824 DCTN1Q14203 1278 aa15.5■□□□□ 0.07
SYMPK-207ENST00000596824 FKBP8Q14318 412 aa15.5■□□□□ 0.07
SYMPK-207ENST00000596824 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
SYMPK-207ENST00000596824 NUP98P52948 1817 aa15.5■□□□□ 0.07
SYMPK-207ENST00000596824 STARD3NLO95772 234 aa15.49■□□□□ 0.07
SYMPK-207ENST00000596824 NEFMP07197 916 aa15.49■□□□□ 0.07
SYMPK-207ENST00000596824 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
SYMPK-207ENST00000596824 PARP3Q9Y6F1 533 aa15.49■□□□□ 0.07
SYMPK-207ENST00000596824 COL11A2P13942 1736 aaPredicted RBP15.48■□□□□ 0.07
SYMPK-207ENST00000596824 SBF1O95248 1867 aa15.48■□□□□ 0.07
SYMPK-207ENST00000596824 GRIN3BO60391 1043 aa15.48■□□□□ 0.07
SYMPK-207ENST00000596824 ZPR1O75312 459 aa15.48■□□□□ 0.07
SYMPK-207ENST00000596824 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
SYMPK-207ENST00000596824 DDR1Q08345 913 aa15.48■□□□□ 0.07
SYMPK-207ENST00000596824 TEX13AQ9BXU3 409 aaPredicted RBP15.48■□□□□ 0.07
SYMPK-207ENST00000596824 NARFQ9UHQ1 456 aa15.48■□□□□ 0.07
SYMPK-207ENST00000596824 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
SYMPK-207ENST00000596824 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
SYMPK-207ENST00000596824 TM4SF1P30408 202 aa15.47■□□□□ 0.07
SYMPK-207ENST00000596824 EIF5P55010 431 aaKnown RBP15.47■□□□□ 0.07
SYMPK-207ENST00000596824 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
SYMPK-207ENST00000596824 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
SYMPK-207ENST00000596824 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
SYMPK-207ENST00000596824 ZEB1P37275 1124 aaPredicted RBP15.46■□□□□ 0.07
SYMPK-207ENST00000596824 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
SYMPK-207ENST00000596824 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
SYMPK-207ENST00000596824 TGFB2P61812 414 aa15.45■□□□□ 0.06
SYMPK-207ENST00000596824 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
SYMPK-207ENST00000596824 A0A087WZG4 1122 aa15.44■□□□□ 0.06
SYMPK-207ENST00000596824 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
SYMPK-207ENST00000596824 A1BGP04217 495 aa15.44■□□□□ 0.06
SYMPK-207ENST00000596824 IL6STP40189 918 aaPredicted RBP15.44■□□□□ 0.06
SYMPK-207ENST00000596824 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
SYMPK-207ENST00000596824 ZNF784Q8NCA9 323 aaPredicted RBP15.44■□□□□ 0.06
SYMPK-207ENST00000596824 PRKRIP1Q9H875 184 aaPredicted RBP15.44■□□□□ 0.06
SYMPK-207ENST00000596824 A0A0G2JLW4 131 aa15.43■□□□□ 0.06
SYMPK-207ENST00000596824 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
SYMPK-207ENST00000596824 NFIXQ14938 502 aa15.43■□□□□ 0.06
SYMPK-207ENST00000596824 THUMPD2Q9BTF0 503 aaKnown RBP15.43■□□□□ 0.06
SYMPK-207ENST00000596824 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
SYMPK-207ENST00000596824 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
SYMPK-207ENST00000596824 DPEP1P16444 411 aa15.42■□□□□ 0.06
SYMPK-207ENST00000596824 MIS18AQ9NYP9 233 aa15.42■□□□□ 0.06
SYMPK-207ENST00000596824 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
SYMPK-207ENST00000596824 PNISRQ8TF01 805 aaKnown RBP15.41■□□□□ 0.06
SYMPK-207ENST00000596824 KCNA3P22001 575 aa15.4■□□□□ 0.06
SYMPK-207ENST00000596824 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
SYMPK-207ENST00000596824 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
SYMPK-207ENST00000596824 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
SYMPK-207ENST00000596824 ADCY9O60503 1353 aa15.39■□□□□ 0.05
SYMPK-207ENST00000596824 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
SYMPK-207ENST00000596824 CAMTA2O94983 1202 aa15.39■□□□□ 0.05
SYMPK-207ENST00000596824 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
SYMPK-207ENST00000596824 RIPK4P57078 832 aa15.39■□□□□ 0.05
SYMPK-207ENST00000596824 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
SYMPK-207ENST00000596824 FER1L6Q2WGJ9 1857 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 TIAM2Q8IVF5 1701 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 NBPF26B4DH59 902 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 SERPINB2P05120 415 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 WDR43Q15061 677 aaKnown RBP eCLIP15.38■□□□□ 0.05
SYMPK-207ENST00000596824 TBC1D9BQ66K14 1250 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 NBPF10Q6P3W6 841 aaKnown RBP15.38■□□□□ 0.05
SYMPK-207ENST00000596824 NBPF15Q8N660 670 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
SYMPK-207ENST00000596824 ATP10DQ9P241 1426 aa15.37■□□□□ 0.05
SYMPK-207ENST00000596824 CHRNA5P30532 468 aa15.37■□□□□ 0.05
SYMPK-207ENST00000596824 EIF4A1P60842 406 aaKnown RBP15.37■□□□□ 0.05
SYMPK-207ENST00000596824 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
SYMPK-207ENST00000596824 DZIP3Q86Y13 1208 aaKnown RBP15.37■□□□□ 0.05
SYMPK-207ENST00000596824 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
SYMPK-207ENST00000596824 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
SYMPK-207ENST00000596824 LMOD3Q0VAK6 560 aa15.36■□□□□ 0.05
SYMPK-207ENST00000596824 NPM2Q86SE8 214 aaKnown RBP15.36■□□□□ 0.05
SYMPK-207ENST00000596824 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
SYMPK-207ENST00000596824 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
SYMPK-207ENST00000596824 ADAMTS8Q9UP79 889 aa15.36■□□□□ 0.05
SYMPK-207ENST00000596824 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
SYMPK-207ENST00000596824 TNRC6CQ9HCJ0 1690 aaKnown RBP15.35■□□□□ 0.05
SYMPK-207ENST00000596824 LAMB2P55268 1798 aa15.34■□□□□ 0.05
SYMPK-207ENST00000596824 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
SYMPK-207ENST00000596824 NEUROD2Q15784 382 aa15.33■□□□□ 0.04
SYMPK-207ENST00000596824 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
SYMPK-207ENST00000596824 PRR5LQ6MZQ0 368 aa15.33■□□□□ 0.04
SYMPK-207ENST00000596824 BABAM1Q9NWV8 329 aa15.33■□□□□ 0.04
SYMPK-207ENST00000596824 TRIM35Q9UPQ4 493 aa15.33■□□□□ 0.04
SYMPK-207ENST00000596824 RGL2O15211 777 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms