RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 KIAA1551Q9HCM1 1747 aa29.57■■■□□ 2.32
GTF2F1-204ENST00000594965 MAPK8IP3Q9UPT6 1336 aa29.57■■■□□ 2.32
GTF2F1-204ENST00000594965 COL15A1P39059 1388 aa29.56■■■□□ 2.32
GTF2F1-204ENST00000594965 STARD3NLO95772 234 aa29.55■■■□□ 2.32
GTF2F1-204ENST00000594965 FKBP8Q14318 412 aa29.55■■■□□ 2.32
GTF2F1-204ENST00000594965 TAF7Q15545 349 aaPredicted RBP29.55■■■□□ 2.32
GTF2F1-204ENST00000594965 TEX13AQ9BXU3 409 aaPredicted RBP29.55■■■□□ 2.32
GTF2F1-204ENST00000594965 ZNF316A6NFI3 1004 aaPredicted RBP29.54■■■□□ 2.32
GTF2F1-204ENST00000594965 CANXP27824 592 aaKnown RBP29.54■■■□□ 2.32
GTF2F1-204ENST00000594965 THUMPD2Q9BTF0 503 aaKnown RBP29.54■■■□□ 2.32
GTF2F1-204ENST00000594965 MIS18AQ9NYP9 233 aa29.53■■■□□ 2.32
GTF2F1-204ENST00000594965 N4BP2Q86UW6 1770 aaPredicted RBP29.52■■■□□ 2.32
GTF2F1-204ENST00000594965 PRAMEF22A3QJZ6 481 aa29.52■■■□□ 2.32
GTF2F1-204ENST00000594965 EIF5P55010 431 aaKnown RBP29.52■■■□□ 2.32
GTF2F1-204ENST00000594965 GPR162Q16538 588 aa29.52■■■□□ 2.32
GTF2F1-204ENST00000594965 USPL1Q5W0Q7 1092 aa29.52■■■□□ 2.32
GTF2F1-204ENST00000594965 NARFQ9UHQ1 456 aa29.52■■■□□ 2.32
GTF2F1-204ENST00000594965 USP16Q9Y5T5 823 aa29.51■■■□□ 2.31
GTF2F1-204ENST00000594965 AFDNP55196 1824 aaKnown RBP29.5■■■□□ 2.31
GTF2F1-204ENST00000594965 LAMB4A4D0S4 1761 aa29.5■■■□□ 2.31
GTF2F1-204ENST00000594965 YBX3P16989 372 aaKnown RBP eCLIP29.5■■■□□ 2.31
GTF2F1-204ENST00000594965 CCDC146Q8IYE0 955 aa29.5■■■□□ 2.31
GTF2F1-204ENST00000594965 C10orf71Q711Q0 1435 aa29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 ZPR1O75312 459 aa29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 A1BGP04217 495 aa29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 TMPOP42166 694 aaKnown RBP29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 BCL2L12Q9HB09 334 aa29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 ADAMTS8Q9UP79 889 aa29.49■■■□□ 2.31
GTF2F1-204ENST00000594965 SCN7AQ01118 1682 aa29.48■■■□□ 2.31
GTF2F1-204ENST00000594965 YY1P25490 414 aa29.48■■■□□ 2.31
GTF2F1-204ENST00000594965 TM4SF1P30408 202 aa29.48■■■□□ 2.31
GTF2F1-204ENST00000594965 RIPK4P57078 832 aa29.48■■■□□ 2.31
GTF2F1-204ENST00000594965 DDR1Q08345 913 aa29.48■■■□□ 2.31
GTF2F1-204ENST00000594965 PARP3Q9Y6F1 533 aa29.48■■■□□ 2.31
GTF2F1-204ENST00000594965 WDR43Q15061 677 aaKnown RBP eCLIP29.47■■■□□ 2.317e-9■■■□□ 16.9
GTF2F1-204ENST00000594965 SNRPA1P09661 255 aaKnown RBP29.46■■■□□ 2.31
GTF2F1-204ENST00000594965 NRXN2Q9P2S2 1712 aa29.45■■■□□ 2.31
GTF2F1-204ENST00000594965 UTRNP46939 3433 aa29.45■■■□□ 2.31
GTF2F1-204ENST00000594965 BRCA1P38398 1863 aaKnown RBP29.45■■■□□ 2.31
GTF2F1-204ENST00000594965 BCORQ6W2J9 1755 aa29.45■■■□□ 2.31
GTF2F1-204ENST00000594965 IL6STP40189 918 aaPredicted RBP29.45■■■□□ 2.31
GTF2F1-204ENST00000594965 RUNDC1Q96C34 613 aa29.45■■■□□ 2.31
GTF2F1-204ENST00000594965 PXDNLA1KZ92 1463 aa29.44■■■□□ 2.3
GTF2F1-204ENST00000594965 PNISRQ8TF01 805 aaKnown RBP29.44■■■□□ 2.3
GTF2F1-204ENST00000594965 A0A087WZG4 1122 aa29.43■■■□□ 2.3
GTF2F1-204ENST00000594965 POLRMTO00411 1230 aaKnown RBP29.43■■■□□ 2.3
GTF2F1-204ENST00000594965 RRP7AQ9Y3A4 280 aaKnown RBP29.43■■■□□ 2.3
GTF2F1-204ENST00000594965 PIP4K2AP48426 406 aaPredicted RBP29.42■■■□□ 2.3
GTF2F1-204ENST00000594965 NFIXQ14938 502 aa29.42■■■□□ 2.3
GTF2F1-204ENST00000594965 EIF4A1P60842 406 aaKnown RBP29.41■■■□□ 2.3
GTF2F1-204ENST00000594965 TGFB2P61812 414 aa29.4■■■□□ 2.3
GTF2F1-204ENST00000594965 TBC1D2BQ9UPU7 963 aa29.4■■■□□ 2.3
GTF2F1-204ENST00000594965 ZNF330Q9Y3S2 320 aaPredicted RBP29.4■■■□□ 2.3
GTF2F1-204ENST00000594965 CCDC184Q52MB2 194 aa29.39■■■□□ 2.3
GTF2F1-204ENST00000594965 WWC3Q9ULE0 1092 aa29.39■■■□□ 2.3
GTF2F1-204ENST00000594965 NBPF26B4DH59 902 aa29.38■■■□□ 2.29
GTF2F1-204ENST00000594965 GIGYF1O75420 1035 aaPredicted RBP29.38■■■□□ 2.29
GTF2F1-204ENST00000594965 NEUROD2Q15784 382 aa29.38■■■□□ 2.29
GTF2F1-204ENST00000594965 NBPF10Q6P3W6 841 aaKnown RBP29.38■■■□□ 2.29
GTF2F1-204ENST00000594965 NBPF15Q8N660 670 aa29.38■■■□□ 2.29
GTF2F1-204ENST00000594965 TRIM35Q9UPQ4 493 aa29.38■■■□□ 2.29
GTF2F1-204ENST00000594965 LMOD3Q0VAK6 560 aa29.37■■■□□ 2.29
GTF2F1-204ENST00000594965 GOLGB1Q14789 3259 aaKnown RBP29.37■■■□□ 2.29
GTF2F1-204ENST00000594965 A0A0G2JLW4 131 aa29.36■■■□□ 2.29
GTF2F1-204ENST00000594965 GRIN3BO60391 1043 aa29.36■■■□□ 2.29
GTF2F1-204ENST00000594965 CAMTA2O94983 1202 aa29.35■■■□□ 2.29
GTF2F1-204ENST00000594965 DPEP1P16444 411 aa29.34■■■□□ 2.29
GTF2F1-204ENST00000594965 TBC1D9BQ66K14 1250 aa29.34■■■□□ 2.29
GTF2F1-204ENST00000594965 TSPYL4Q9UJ04 414 aa29.34■■■□□ 2.29
GTF2F1-204ENST00000594965 KCNA3P22001 575 aa29.33■■■□□ 2.29
GTF2F1-204ENST00000594965 SERPINB2P05120 415 aa29.32■■■□□ 2.28
GTF2F1-204ENST00000594965 BICDL1Q6ZP65 573 aa29.32■■■□□ 2.28
GTF2F1-204ENST00000594965 DZIP3Q86Y13 1208 aaKnown RBP29.32■■■□□ 2.28
GTF2F1-204ENST00000594965 BABAM1Q9NWV8 329 aa29.32■■■□□ 2.28
GTF2F1-204ENST00000594965 ANKRD31Q8N7Z5 1873 aa29.31■■■□□ 2.28
GTF2F1-204ENST00000594965 ARFGEF1Q9Y6D6 1849 aa29.31■■■□□ 2.28
GTF2F1-204ENST00000594965 NPM2Q86SE8 214 aaKnown RBP29.3■■■□□ 2.28
GTF2F1-204ENST00000594965 DLEC1Q9Y238 1755 aa29.3■■■□□ 2.28
GTF2F1-204ENST00000594965 APAF1O14727 1248 aa29.27■■■□□ 2.28
GTF2F1-204ENST00000594965 NUP98P52948 1817 aa29.27■■■□□ 2.28
GTF2F1-204ENST00000594965 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.28
GTF2F1-204ENST00000594965 CHL1O00533 1208 aa29.26■■■□□ 2.27
GTF2F1-204ENST00000594965 ANP32CO43423 234 aa29.26■■■□□ 2.27
GTF2F1-204ENST00000594965 CHRNA5P30532 468 aa29.26■■■□□ 2.27
GTF2F1-204ENST00000594965 ZNF784Q8NCA9 323 aaPredicted RBP29.24■■■□□ 2.27
GTF2F1-204ENST00000594965 BCS1LQ9Y276 419 aa29.24■■■□□ 2.27
GTF2F1-204ENST00000594965 CLEC4GQ6UXB4 293 aa29.23■■■□□ 2.27
GTF2F1-204ENST00000594965 SETDB2Q96T68 719 aa29.22■■■□□ 2.27
GTF2F1-204ENST00000594965 PRR5LQ6MZQ0 368 aa29.21■■■□□ 2.27
GTF2F1-204ENST00000594965 PIM2Q9P1W9 311 aa29.21■■■□□ 2.27
GTF2F1-204ENST00000594965 LAS1LQ9Y4W2 734 aaKnown RBP29.21■■■□□ 2.27
GTF2F1-204ENST00000594965 COL11A2P13942 1736 aaPredicted RBP29.2■■■□□ 2.27
GTF2F1-204ENST00000594965 RGL2O15211 777 aa29.2■■■□□ 2.26
GTF2F1-204ENST00000594965 HLFQ16534 295 aa29.2■■■□□ 2.26
GTF2F1-204ENST00000594965 NGEFQ8N5V2 710 aa29.2■■■□□ 2.26
GTF2F1-204ENST00000594965 ERBB4Q15303 1308 aa29.2■■■□□ 2.26
GTF2F1-204ENST00000594965 MYL6BP14649 208 aa29.19■■■□□ 2.26
GTF2F1-204ENST00000594965 KRT24Q2M2I5 525 aa29.19■■■□□ 2.26
GTF2F1-204ENST00000594965 EIF2S2P20042 333 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms