RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ZNF316A6NFI3 1004 aaPredicted RBP22.9■■□□□ 1.26
IRF3-208ENST00000594387 TAF7Q15545 349 aaPredicted RBP22.9■■□□□ 1.26
IRF3-208ENST00000594387 PNISRQ8TF01 805 aaKnown RBP22.9■■□□□ 1.26
IRF3-208ENST00000594387 GYS1P13807 737 aa22.89■■□□□ 1.25
IRF3-208ENST00000594387 CANXP27824 592 aaKnown RBP22.89■■□□□ 1.25
IRF3-208ENST00000594387 NLGN2Q8NFZ4 835 aa22.89■■□□□ 1.25
IRF3-208ENST00000594387 A0A087WZG4 1122 aa22.88■■□□□ 1.25
IRF3-208ENST00000594387 YY1P25490 414 aa22.88■■□□□ 1.25
IRF3-208ENST00000594387 SOS1Q07889 1333 aaPredicted RBP22.87■■□□□ 1.25
IRF3-208ENST00000594387 USP42Q9H9J4 1324 aaKnown RBP22.87■■□□□ 1.25
IRF3-208ENST00000594387 ZBTB1Q9Y2K1 713 aa22.87■■□□□ 1.25
IRF3-208ENST00000594387 LMOD3Q0VAK6 560 aa22.86■■□□□ 1.25
IRF3-208ENST00000594387 SRP68Q9UHB9 627 aaKnown RBP22.86■■□□□ 1.25
IRF3-208ENST00000594387 COL15A1P39059 1388 aa22.86■■□□□ 1.25
IRF3-208ENST00000594387 SNRPA1P09661 255 aaKnown RBP22.85■■□□□ 1.25
IRF3-208ENST00000594387 RIPK4P57078 832 aa22.85■■□□□ 1.25
IRF3-208ENST00000594387 NARFQ9UHQ1 456 aa22.85■■□□□ 1.25
IRF3-208ENST00000594387 ZNF330Q9Y3S2 320 aaPredicted RBP22.85■■□□□ 1.25
IRF3-208ENST00000594387 KCNQ3O43525 872 aa22.84■■□□□ 1.25
IRF3-208ENST00000594387 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
IRF3-208ENST00000594387 USPL1Q5W0Q7 1092 aa22.84■■□□□ 1.25
IRF3-208ENST00000594387 KIF13BQ9NQT8 1826 aa22.83■■□□□ 1.25
IRF3-208ENST00000594387 FKBP8Q14318 412 aa22.82■■□□□ 1.24
IRF3-208ENST00000594387 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
IRF3-208ENST00000594387 IL6STP40189 918 aaPredicted RBP22.81■■□□□ 1.24
IRF3-208ENST00000594387 KDM3BQ7LBC6 1761 aa22.81■■□□□ 1.24
IRF3-208ENST00000594387 TMPOP42166 694 aaKnown RBP22.8■■□□□ 1.24
IRF3-208ENST00000594387 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
IRF3-208ENST00000594387 NEUROD2Q15784 382 aa22.8■■□□□ 1.24
IRF3-208ENST00000594387 CCDC146Q8IYE0 955 aa22.8■■□□□ 1.24
IRF3-208ENST00000594387 MIS18AQ9NYP9 233 aa22.8■■□□□ 1.24
IRF3-208ENST00000594387 N4BP2Q86UW6 1770 aaPredicted RBP22.8■■□□□ 1.24
IRF3-208ENST00000594387 A1BGP04217 495 aa22.79■■□□□ 1.24
IRF3-208ENST00000594387 TGFB2P61812 414 aa22.79■■□□□ 1.24
IRF3-208ENST00000594387 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
IRF3-208ENST00000594387 ADAMTS8Q9UP79 889 aa22.78■■□□□ 1.24
IRF3-208ENST00000594387 LAMB4A4D0S4 1761 aa22.78■■□□□ 1.24
IRF3-208ENST00000594387 ANP32CO43423 234 aa22.77■■□□□ 1.24
IRF3-208ENST00000594387 THUMPD2Q9BTF0 503 aaKnown RBP22.77■■□□□ 1.24
IRF3-208ENST00000594387 AFDNP55196 1824 aaKnown RBP22.77■■□□□ 1.24
IRF3-208ENST00000594387 TM4SF1P30408 202 aa22.76■■□□□ 1.23
IRF3-208ENST00000594387 TSPYL4Q9UJ04 414 aa22.75■■□□□ 1.23
IRF3-208ENST00000594387 TBC1D2BQ9UPU7 963 aa22.75■■□□□ 1.23
IRF3-208ENST00000594387 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
IRF3-208ENST00000594387 BABAM1Q9NWV8 329 aa22.74■■□□□ 1.23
IRF3-208ENST00000594387 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
IRF3-208ENST00000594387 PRAMEF22A3QJZ6 481 aa22.73■■□□□ 1.23
IRF3-208ENST00000594387 POLRMTO00411 1230 aaKnown RBP22.73■■□□□ 1.23
IRF3-208ENST00000594387 YBX3P16989 372 aaKnown RBP eCLIP22.73■■□□□ 1.23
IRF3-208ENST00000594387 NFIXQ14938 502 aa22.73■■□□□ 1.23
IRF3-208ENST00000594387 BICDL1Q6ZP65 573 aa22.73■■□□□ 1.23
IRF3-208ENST00000594387 DZIP3Q86Y13 1208 aaKnown RBP22.73■■□□□ 1.23
IRF3-208ENST00000594387 SCN7AQ01118 1682 aa22.72■■□□□ 1.23
IRF3-208ENST00000594387 EIF4A1P60842 406 aaKnown RBP22.72■■□□□ 1.23
IRF3-208ENST00000594387 DDR1Q08345 913 aa22.72■■□□□ 1.23
IRF3-208ENST00000594387 WWC3Q9ULE0 1092 aa22.72■■□□□ 1.23
IRF3-208ENST00000594387 A0A0G2JLW4 131 aa22.71■■□□□ 1.23
IRF3-208ENST00000594387 NPHP1O15259 732 aa22.71■■□□□ 1.23
IRF3-208ENST00000594387 SERPINB2P05120 415 aa22.71■■□□□ 1.23
IRF3-208ENST00000594387 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
IRF3-208ENST00000594387 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
IRF3-208ENST00000594387 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
IRF3-208ENST00000594387 BCL2L12Q9HB09 334 aa22.7■■□□□ 1.22
IRF3-208ENST00000594387 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
IRF3-208ENST00000594387 BCORQ6W2J9 1755 aa22.7■■□□□ 1.22
IRF3-208ENST00000594387 PXDNLA1KZ92 1463 aa22.69■■□□□ 1.22
IRF3-208ENST00000594387 DPEP1P16444 411 aa22.69■■□□□ 1.22
IRF3-208ENST00000594387 SETDB2Q96T68 719 aa22.69■■□□□ 1.22
IRF3-208ENST00000594387 BCS1LQ9Y276 419 aa22.69■■□□□ 1.22
IRF3-208ENST00000594387 BRCA1P38398 1863 aaKnown RBP22.68■■□□□ 1.22
IRF3-208ENST00000594387 KIAA1551Q9HCM1 1747 aa22.68■■□□□ 1.22
IRF3-208ENST00000594387 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
IRF3-208ENST00000594387 TBC1D9BQ66K14 1250 aa22.67■■□□□ 1.22
IRF3-208ENST00000594387 NRXN2Q9P2S2 1712 aa22.67■■□□□ 1.22
IRF3-208ENST00000594387 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
IRF3-208ENST00000594387 CLEC4GQ6UXB4 293 aa22.66■■□□□ 1.22
IRF3-208ENST00000594387 ARFGEF1Q9Y6D6 1849 aa22.66■■□□□ 1.22
IRF3-208ENST00000594387 CARMIL3Q8ND23 1372 aa22.65■■□□□ 1.22
IRF3-208ENST00000594387 CAMTA2O94983 1202 aa22.65■■□□□ 1.22
IRF3-208ENST00000594387 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
IRF3-208ENST00000594387 NUP98P52948 1817 aa22.64■■□□□ 1.22
IRF3-208ENST00000594387 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
IRF3-208ENST00000594387 APAF1O14727 1248 aa22.64■■□□□ 1.21
IRF3-208ENST00000594387 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
IRF3-208ENST00000594387 KIF6Q6ZMV9 814 aa22.64■■□□□ 1.21
IRF3-208ENST00000594387 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
IRF3-208ENST00000594387 MRS2Q9HD23 443 aa22.64■■□□□ 1.21
IRF3-208ENST00000594387 TRIM35Q9UPQ4 493 aa22.64■■□□□ 1.21
IRF3-208ENST00000594387 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
IRF3-208ENST00000594387 DALRD3Q5D0E6 543 aaKnown RBP22.63■■□□□ 1.21
IRF3-208ENST00000594387 PDZRN3Q9UPQ7 1066 aa22.63■■□□□ 1.21
IRF3-208ENST00000594387 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
IRF3-208ENST00000594387 H0YIN7 160 aa22.62■■□□□ 1.21
IRF3-208ENST00000594387 RGL2O15211 777 aa22.62■■□□□ 1.21
IRF3-208ENST00000594387 MYL6BP14649 208 aa22.62■■□□□ 1.21
IRF3-208ENST00000594387 ST5P78524 1137 aa22.62■■□□□ 1.21
IRF3-208ENST00000594387 CHL1O00533 1208 aa22.61■■□□□ 1.21
IRF3-208ENST00000594387 CHRNA5P30532 468 aa22.61■■□□□ 1.21
IRF3-208ENST00000594387 PDE6BP35913 854 aa22.61■■□□□ 1.21
IRF3-208ENST00000594387 CNBD1Q8NA66 436 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms