RNA–Protein interactions for RNA: ENST00000594325.1

CRLF1-203, Transcript of cytokine receptor like factor 1, humanhuman

TSL 3

Gene CRLF1, Length 1,020 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-203ENST00000594325 PARP3Q9Y6F1 533 aa30.04■■■□□ 2.4
CRLF1-203ENST00000594325 KCNQ3O43525 872 aa30.03■■■□□ 2.4
CRLF1-203ENST00000594325 CANXP27824 592 aaKnown RBP30.03■■■□□ 2.4
CRLF1-203ENST00000594325 NPM2Q86SE8 214 aaKnown RBP30.03■■■□□ 2.4
CRLF1-203ENST00000594325 PELP1Q8IZL8 1130 aaKnown RBP30.03■■■□□ 2.4
CRLF1-203ENST00000594325 SIPA1L3O60292 1781 aaPredicted RBP30.03■■■□□ 2.4
CRLF1-203ENST00000594325 UBR2Q8IWV8 1755 aa30.03■■■□□ 2.4
CRLF1-203ENST00000594325 A0A087WZG4 1122 aa30.02■■■□□ 2.4
CRLF1-203ENST00000594325 SRP68Q9UHB9 627 aaKnown RBP30.02■■■□□ 2.4
CRLF1-203ENST00000594325 YY1P25490 414 aa30.01■■■□□ 2.39
CRLF1-203ENST00000594325 SNRPA1P09661 255 aaKnown RBP30■■■□□ 2.39
CRLF1-203ENST00000594325 NARFQ9UHQ1 456 aa30■■■□□ 2.39
CRLF1-203ENST00000594325 RIPK4P57078 832 aa29.99■■■□□ 2.39
CRLF1-203ENST00000594325 LMOD3Q0VAK6 560 aa29.99■■■□□ 2.39
CRLF1-203ENST00000594325 USPL1Q5W0Q7 1092 aa29.99■■■□□ 2.39
CRLF1-203ENST00000594325 COL15A1P39059 1388 aa29.99■■■□□ 2.39
CRLF1-203ENST00000594325 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
CRLF1-203ENST00000594325 FKBP8Q14318 412 aa29.98■■■□□ 2.39
CRLF1-203ENST00000594325 GRIN3BO60391 1043 aa29.97■■■□□ 2.39
CRLF1-203ENST00000594325 IL6STP40189 918 aaPredicted RBP29.96■■■□□ 2.39
CRLF1-203ENST00000594325 TMPOP42166 694 aaKnown RBP29.95■■■□□ 2.39
CRLF1-203ENST00000594325 RUNDC1Q96C34 613 aa29.95■■■□□ 2.39
CRLF1-203ENST00000594325 TGFB2P61812 414 aa29.94■■■□□ 2.38
CRLF1-203ENST00000594325 MIS18AQ9NYP9 233 aa29.94■■■□□ 2.38
CRLF1-203ENST00000594325 USP16Q9Y5T5 823 aa29.94■■■□□ 2.38
CRLF1-203ENST00000594325 A1BGP04217 495 aa29.93■■■□□ 2.38
CRLF1-203ENST00000594325 ADAMTS8Q9UP79 889 aa29.93■■■□□ 2.38
CRLF1-203ENST00000594325 ZNF330Q9Y3S2 320 aaPredicted RBP29.93■■■□□ 2.38
CRLF1-203ENST00000594325 C4AP0C0L4 1744 aa29.93■■■□□ 2.38
CRLF1-203ENST00000594325 TM4SF1P30408 202 aa29.92■■■□□ 2.38
CRLF1-203ENST00000594325 CCDC146Q8IYE0 955 aa29.92■■■□□ 2.38
CRLF1-203ENST00000594325 THUMPD2Q9BTF0 503 aaKnown RBP29.92■■■□□ 2.38
CRLF1-203ENST00000594325 DLG5Q8TDM6 1919 aa29.88■■■□□ 2.37
CRLF1-203ENST00000594325 YBX3P16989 372 aaKnown RBP eCLIP29.88■■■□□ 2.374e-6■□□□□ 9.2
CRLF1-203ENST00000594325 DDR1Q08345 913 aa29.88■■■□□ 2.37
CRLF1-203ENST00000594325 BABAM1Q9NWV8 329 aa29.88■■■□□ 2.37
CRLF1-203ENST00000594325 PRAMEF22A3QJZ6 481 aa29.87■■■□□ 2.37
CRLF1-203ENST00000594325 POLRMTO00411 1230 aaKnown RBP29.87■■■□□ 2.37
CRLF1-203ENST00000594325 NEUROD2Q15784 382 aa29.87■■■□□ 2.37
CRLF1-203ENST00000594325 EIF4A1P60842 406 aaKnown RBP29.86■■■□□ 2.37
CRLF1-203ENST00000594325 NFIXQ14938 502 aa29.86■■■□□ 2.37
CRLF1-203ENST00000594325 BCL2L12Q9HB09 334 aa29.86■■■□□ 2.37
CRLF1-203ENST00000594325 TSPYL4Q9UJ04 414 aa29.86■■■□□ 2.37
CRLF1-203ENST00000594325 TBC1D2BQ9UPU7 963 aa29.86■■■□□ 2.37
CRLF1-203ENST00000594325 C10orf71Q711Q0 1435 aa29.86■■■□□ 2.37
CRLF1-203ENST00000594325 ANP32CO43423 234 aa29.85■■■□□ 2.37
CRLF1-203ENST00000594325 RRP7AQ9Y3A4 280 aaKnown RBP29.85■■■□□ 2.37
CRLF1-203ENST00000594325 GIGYF1O75420 1035 aaPredicted RBP29.83■■■□□ 2.37
CRLF1-203ENST00000594325 DZIP3Q86Y13 1208 aaKnown RBP29.83■■■□□ 2.37
CRLF1-203ENST00000594325 A0A0G2JLW4 131 aa29.82■■■□□ 2.36
CRLF1-203ENST00000594325 SERPINB2P05120 415 aa29.81■■■□□ 2.36
CRLF1-203ENST00000594325 DPEP1P16444 411 aa29.8■■■□□ 2.36
CRLF1-203ENST00000594325 BICDL1Q6ZP65 573 aa29.8■■■□□ 2.36
CRLF1-203ENST00000594325 PXDNLA1KZ92 1463 aa29.8■■■□□ 2.36
CRLF1-203ENST00000594325 CAMTA2O94983 1202 aa29.79■■■□□ 2.36
CRLF1-203ENST00000594325 PIP4K2AP48426 406 aaPredicted RBP29.79■■■□□ 2.36
CRLF1-203ENST00000594325 WWC3Q9ULE0 1092 aa29.79■■■□□ 2.36
CRLF1-203ENST00000594325 ZNF652Q9Y2D9 606 aa29.78■■■□□ 2.36
CRLF1-203ENST00000594325 TBC1D9BQ66K14 1250 aa29.77■■■□□ 2.36
CRLF1-203ENST00000594325 CLEC4GQ6UXB4 293 aa29.77■■■□□ 2.36
CRLF1-203ENST00000594325 SETDB2Q96T68 719 aa29.77■■■□□ 2.36
CRLF1-203ENST00000594325 TRIM35Q9UPQ4 493 aa29.77■■■□□ 2.36
CRLF1-203ENST00000594325 KIF13BQ9NQT8 1826 aa29.77■■■□□ 2.36
CRLF1-203ENST00000594325 CHD4Q14839 1912 aa29.77■■■□□ 2.36
CRLF1-203ENST00000594325 NBPF26B4DH59 902 aa29.76■■■□□ 2.35
CRLF1-203ENST00000594325 NBPF10Q6P3W6 841 aaKnown RBP29.76■■■□□ 2.35
CRLF1-203ENST00000594325 NBPF15Q8N660 670 aa29.76■■■□□ 2.35
CRLF1-203ENST00000594325 PIM2Q9P1W9 311 aa29.76■■■□□ 2.35
CRLF1-203ENST00000594325 KDM3BQ7LBC6 1761 aa29.75■■■□□ 2.35
CRLF1-203ENST00000594325 RGL2O15211 777 aa29.75■■■□□ 2.35
CRLF1-203ENST00000594325 BCS1LQ9Y276 419 aa29.75■■■□□ 2.35
CRLF1-203ENST00000594325 LAS1LQ9Y4W2 734 aaKnown RBP29.74■■■□□ 2.35
CRLF1-203ENST00000594325 UTRNP46939 3433 aa29.73■■■□□ 2.35
CRLF1-203ENST00000594325 APAF1O14727 1248 aa29.73■■■□□ 2.35
CRLF1-203ENST00000594325 CARMIL3Q8ND23 1372 aa29.73■■■□□ 2.35
CRLF1-203ENST00000594325 ERBB4Q15303 1308 aa29.72■■■□□ 2.35
CRLF1-203ENST00000594325 CHL1O00533 1208 aa29.72■■■□□ 2.35
CRLF1-203ENST00000594325 NPHP1O15259 732 aa29.72■■■□□ 2.35
CRLF1-203ENST00000594325 CALD1Q05682 793 aaKnown RBP29.71■■■□□ 2.35
CRLF1-203ENST00000594325 KCNA3P22001 575 aa29.7■■■□□ 2.35
CRLF1-203ENST00000594325 DALRD3Q5D0E6 543 aaKnown RBP29.7■■■□□ 2.35
CRLF1-203ENST00000594325 MRS2Q9HD23 443 aa29.7■■■□□ 2.35
CRLF1-203ENST00000594325 PDZRN3Q9UPQ7 1066 aa29.7■■■□□ 2.35
CRLF1-203ENST00000594325 NGEFQ8N5V2 710 aa29.69■■■□□ 2.34
CRLF1-203ENST00000594325 ZNF784Q8NCA9 323 aaPredicted RBP29.69■■■□□ 2.34
CRLF1-203ENST00000594325 EIF2S2P20042 333 aaKnown RBP29.68■■■□□ 2.34
CRLF1-203ENST00000594325 CHRNA5P30532 468 aa29.68■■■□□ 2.34
CRLF1-203ENST00000594325 CCDC184Q52MB2 194 aa29.68■■■□□ 2.34
CRLF1-203ENST00000594325 SCN7AQ01118 1682 aa29.67■■■□□ 2.34
CRLF1-203ENST00000594325 MYL6BP14649 208 aa29.67■■■□□ 2.34
CRLF1-203ENST00000594325 KIF6Q6ZMV9 814 aa29.67■■■□□ 2.34
CRLF1-203ENST00000594325 CFAP44Q96MT7 982 aa29.67■■■□□ 2.34
CRLF1-203ENST00000594325 BRIP1Q9BX63 1249 aa29.67■■■□□ 2.34
CRLF1-203ENST00000594325 N4BP2Q86UW6 1770 aaPredicted RBP29.67■■■□□ 2.34
CRLF1-203ENST00000594325 ERVV-1B6SEH8 477 aa29.66■■■□□ 2.34
CRLF1-203ENST00000594325 H0YIN7 160 aa29.66■■■□□ 2.34
CRLF1-203ENST00000594325 PDE6BP35913 854 aa29.66■■■□□ 2.34
CRLF1-203ENST00000594325 ST5P78524 1137 aa29.66■■■□□ 2.34
CRLF1-203ENST00000594325 CNBD1Q8NA66 436 aa29.66■■■□□ 2.34
CRLF1-203ENST00000594325 LAMB4A4D0S4 1761 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms