RNA–Protein interactions for RNA: ENST00000594087.1

CCDC61-202, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC61, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-202ENST00000594087 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
CCDC61-202ENST00000594087 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
CCDC61-202ENST00000594087 A0A087WZG4 1122 aa23.36■■□□□ 1.33
CCDC61-202ENST00000594087 COL15A1P39059 1388 aa23.36■■□□□ 1.33
CCDC61-202ENST00000594087 SNRPA1P09661 255 aaKnown RBP23.35■■□□□ 1.33
CCDC61-202ENST00000594087 GPR162Q16538 588 aa23.35■■□□□ 1.33
CCDC61-202ENST00000594087 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
CCDC61-202ENST00000594087 NLGN2Q8NFZ4 835 aa23.35■■□□□ 1.33
CCDC61-202ENST00000594087 PARP3Q9Y6F1 533 aa23.35■■□□□ 1.33
CCDC61-202ENST00000594087 DLG5Q8TDM6 1919 aa23.34■■□□□ 1.33
CCDC61-202ENST00000594087 KCNQ3O43525 872 aa23.34■■□□□ 1.33
CCDC61-202ENST00000594087 CANXP27824 592 aaKnown RBP23.34■■□□□ 1.33
CCDC61-202ENST00000594087 RIPK4P57078 832 aa23.34■■□□□ 1.33
CCDC61-202ENST00000594087 RUNDC1Q96C34 613 aa23.34■■□□□ 1.33
CCDC61-202ENST00000594087 NARFQ9UHQ1 456 aa23.34■■□□□ 1.33
CCDC61-202ENST00000594087 IL6STP40189 918 aaPredicted RBP23.33■■□□□ 1.33
CCDC61-202ENST00000594087 EIF5P55010 431 aaKnown RBP23.33■■□□□ 1.33
CCDC61-202ENST00000594087 SRP68Q9UHB9 627 aaKnown RBP23.33■■□□□ 1.33
CCDC61-202ENST00000594087 TMPOP42166 694 aaKnown RBP23.32■■□□□ 1.32
CCDC61-202ENST00000594087 FKBP8Q14318 412 aa23.31■■□□□ 1.32
CCDC61-202ENST00000594087 USPL1Q5W0Q7 1092 aa23.31■■□□□ 1.32
CCDC61-202ENST00000594087 ADAMTS8Q9UP79 889 aa23.31■■□□□ 1.32
CCDC61-202ENST00000594087 GRIN3BO60391 1043 aa23.3■■□□□ 1.32
CCDC61-202ENST00000594087 BABAM1Q9NWV8 329 aa23.3■■□□□ 1.32
CCDC61-202ENST00000594087 TGFB2P61812 414 aa23.29■■□□□ 1.32
CCDC61-202ENST00000594087 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
CCDC61-202ENST00000594087 YY1P25490 414 aa23.28■■□□□ 1.32
CCDC61-202ENST00000594087 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
CCDC61-202ENST00000594087 ANP32CO43423 234 aa23.27■■□□□ 1.32
CCDC61-202ENST00000594087 A1BGP04217 495 aa23.27■■□□□ 1.32
CCDC61-202ENST00000594087 TM4SF1P30408 202 aa23.27■■□□□ 1.32
CCDC61-202ENST00000594087 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
CCDC61-202ENST00000594087 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
CCDC61-202ENST00000594087 MIS18AQ9NYP9 233 aa23.27■■□□□ 1.32
CCDC61-202ENST00000594087 UTRNP46939 3433 aa23.26■■□□□ 1.31
CCDC61-202ENST00000594087 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
CCDC61-202ENST00000594087 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
CCDC61-202ENST00000594087 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
CCDC61-202ENST00000594087 EIF4A1P60842 406 aaKnown RBP23.24■■□□□ 1.31
CCDC61-202ENST00000594087 TSPYL4Q9UJ04 414 aa23.24■■□□□ 1.31
CCDC61-202ENST00000594087 KIF13BQ9NQT8 1826 aa23.24■■□□□ 1.31
CCDC61-202ENST00000594087 POLRMTO00411 1230 aaKnown RBP23.23■■□□□ 1.31
CCDC61-202ENST00000594087 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
CCDC61-202ENST00000594087 DDR1Q08345 913 aa23.23■■□□□ 1.31
CCDC61-202ENST00000594087 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
CCDC61-202ENST00000594087 PRAMEF22A3QJZ6 481 aa23.22■■□□□ 1.31
CCDC61-202ENST00000594087 NFIXQ14938 502 aa23.22■■□□□ 1.31
CCDC61-202ENST00000594087 BCL2L12Q9HB09 334 aa23.22■■□□□ 1.31
CCDC61-202ENST00000594087 RRP7AQ9Y3A4 280 aaKnown RBP23.22■■□□□ 1.31
CCDC61-202ENST00000594087 RGL2O15211 777 aa23.21■■□□□ 1.31
CCDC61-202ENST00000594087 TBC1D2BQ9UPU7 963 aa23.21■■□□□ 1.31
CCDC61-202ENST00000594087 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.3
CCDC61-202ENST00000594087 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
CCDC61-202ENST00000594087 GOLGB1Q14789 3259 aaKnown RBP23.2■■□□□ 1.3
CCDC61-202ENST00000594087 PXDNLA1KZ92 1463 aa23.19■■□□□ 1.3
CCDC61-202ENST00000594087 CLEC4GQ6UXB4 293 aa23.19■■□□□ 1.3
CCDC61-202ENST00000594087 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
CCDC61-202ENST00000594087 ZNF652Q9Y2D9 606 aa23.18■■□□□ 1.3
CCDC61-202ENST00000594087 LAMB4A4D0S4 1761 aa23.18■■□□□ 1.3
CCDC61-202ENST00000594087 CHD4Q14839 1912 aa23.18■■□□□ 1.3
CCDC61-202ENST00000594087 ERBB4Q15303 1308 aa23.17■■□□□ 1.3
CCDC61-202ENST00000594087 SCN7AQ01118 1682 aa23.17■■□□□ 1.3
CCDC61-202ENST00000594087 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
CCDC61-202ENST00000594087 SERPINB2P05120 415 aa23.17■■□□□ 1.3
CCDC61-202ENST00000594087 A0A0G2JLW4 131 aa23.16■■□□□ 1.3
CCDC61-202ENST00000594087 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
CCDC61-202ENST00000594087 CALD1Q05682 793 aaKnown RBP23.16■■□□□ 1.3
CCDC61-202ENST00000594087 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
CCDC61-202ENST00000594087 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
CCDC61-202ENST00000594087 SETDB2Q96T68 719 aa23.16■■□□□ 1.3
CCDC61-202ENST00000594087 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
CCDC61-202ENST00000594087 CHL1O00533 1208 aa23.15■■□□□ 1.3
CCDC61-202ENST00000594087 APAF1O14727 1248 aa23.15■■□□□ 1.3
CCDC61-202ENST00000594087 DPEP1P16444 411 aa23.15■■□□□ 1.3
CCDC61-202ENST00000594087 TBC1D9BQ66K14 1250 aa23.15■■□□□ 1.3
CCDC61-202ENST00000594087 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
CCDC61-202ENST00000594087 BICDL1Q6ZP65 573 aa23.14■■□□□ 1.29
CCDC61-202ENST00000594087 MRS2Q9HD23 443 aa23.14■■□□□ 1.29
CCDC61-202ENST00000594087 NRXN2Q9P2S2 1712 aa23.13■■□□□ 1.29
CCDC61-202ENST00000594087 PIM2Q9P1W9 311 aa23.13■■□□□ 1.29
CCDC61-202ENST00000594087 PDZRN3Q9UPQ7 1066 aa23.13■■□□□ 1.29
CCDC61-202ENST00000594087 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
CCDC61-202ENST00000594087 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
CCDC61-202ENST00000594087 CCDC184Q52MB2 194 aa23.11■■□□□ 1.29
CCDC61-202ENST00000594087 BCS1LQ9Y276 419 aa23.11■■□□□ 1.29
CCDC61-202ENST00000594087 LAS1LQ9Y4W2 734 aaKnown RBP23.11■■□□□ 1.29
CCDC61-202ENST00000594087 BCORQ6W2J9 1755 aa23.11■■□□□ 1.29
CCDC61-202ENST00000594087 N4BP2Q86UW6 1770 aaPredicted RBP23.11■■□□□ 1.29
CCDC61-202ENST00000594087 ERVV-1B6SEH8 477 aa23.1■■□□□ 1.29
CCDC61-202ENST00000594087 KCNA3P22001 575 aa23.1■■□□□ 1.29
CCDC61-202ENST00000594087 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
CCDC61-202ENST00000594087 NPHP1O15259 732 aa23.09■■□□□ 1.29
CCDC61-202ENST00000594087 KIF6Q6ZMV9 814 aa23.09■■□□□ 1.29
CCDC61-202ENST00000594087 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
CCDC61-202ENST00000594087 HOXB7P09629 217 aa23.08■■□□□ 1.29
CCDC61-202ENST00000594087 PDE6BP35913 854 aa23.08■■□□□ 1.29
CCDC61-202ENST00000594087 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
CCDC61-202ENST00000594087 CNBD1Q8NA66 436 aa23.08■■□□□ 1.29
CCDC61-202ENST00000594087 BRIP1Q9BX63 1249 aa23.08■■□□□ 1.29
CCDC61-202ENST00000594087 MYL6BP14649 208 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms