RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 NPC1L1Q9UHC9 1359 aa14.5□□□□□ -0.09
USE1-203ENST00000593597 TM4SF1P30408 202 aa14.5□□□□□ -0.09
USE1-203ENST00000593597 USPL1Q5W0Q7 1092 aa14.5□□□□□ -0.09
USE1-203ENST00000593597 BCL2L12Q9HB09 334 aa14.5□□□□□ -0.09
USE1-203ENST00000593597 ZBTB1Q9Y2K1 713 aa14.5□□□□□ -0.09
USE1-203ENST00000593597 COL15A1P39059 1388 aa14.49□□□□□ -0.09
USE1-203ENST00000593597 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
USE1-203ENST00000593597 CHRNA5P30532 468 aa14.49□□□□□ -0.09
USE1-203ENST00000593597 TIAM2Q8IVF5 1701 aa14.49□□□□□ -0.09
USE1-203ENST00000593597 CARMIL3Q8ND23 1372 aa14.48□□□□□ -0.09
USE1-203ENST00000593597 FCHSD2O94868 740 aa14.48□□□□□ -0.09
USE1-203ENST00000593597 CACNA1SQ13698 1873 aa14.47□□□□□ -0.09
USE1-203ENST00000593597 TNRC6CQ9HCJ0 1690 aaKnown RBP14.47□□□□□ -0.09
USE1-203ENST00000593597 HSPA6P17066 643 aa14.47□□□□□ -0.09
USE1-203ENST00000593597 WDR90Q96KV7 1748 aa14.46□□□□□ -0.09
USE1-203ENST00000593597 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.09
USE1-203ENST00000593597 NFIXQ14938 502 aa14.46□□□□□ -0.09
USE1-203ENST00000593597 ARHGAP27Q6ZUM4 889 aa14.46□□□□□ -0.09
USE1-203ENST00000593597 IL17REQ8NFR9 667 aa14.46□□□□□ -0.09
USE1-203ENST00000593597 NMRK2Q9NPI5 230 aa14.46□□□□□ -0.09
USE1-203ENST00000593597 NARFQ9UHQ1 456 aa14.45□□□□□ -0.1
USE1-203ENST00000593597 PRELPP51888 382 aa14.44□□□□□ -0.1
USE1-203ENST00000593597 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
USE1-203ENST00000593597 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
USE1-203ENST00000593597 PIM2Q9P1W9 311 aa14.44□□□□□ -0.1
USE1-203ENST00000593597 DLG5Q8TDM6 1919 aa14.44□□□□□ -0.1
USE1-203ENST00000593597 CEMIPQ8WUJ3 1361 aa14.44□□□□□ -0.1
USE1-203ENST00000593597 ARFGEF2Q9Y6D5 1785 aa14.43□□□□□ -0.1
USE1-203ENST00000593597 ZNF496Q96IT1 587 aaPredicted RBP14.43□□□□□ -0.1
USE1-203ENST00000593597 FER1L6Q2WGJ9 1857 aa14.43□□□□□ -0.1
USE1-203ENST00000593597 HEG1Q9ULI3 1381 aa14.43□□□□□ -0.1
USE1-203ENST00000593597 DICER1Q9UPY3 1922 aaKnown RBP14.43□□□□□ -0.1
USE1-203ENST00000593597 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
USE1-203ENST00000593597 ZPR1O75312 459 aa14.42□□□□□ -0.1
USE1-203ENST00000593597 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
USE1-203ENST00000593597 RASSF7Q02833 373 aa14.42□□□□□ -0.1
USE1-203ENST00000593597 DALRD3Q5D0E6 543 aaKnown RBP14.42□□□□□ -0.1
USE1-203ENST00000593597 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
USE1-203ENST00000593597 KCNQ3O43525 872 aa14.41□□□□□ -0.1
USE1-203ENST00000593597 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
USE1-203ENST00000593597 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
USE1-203ENST00000593597 LAMB4A4D0S4 1761 aa14.4□□□□□ -0.1
USE1-203ENST00000593597 SERPINB2P05120 415 aa14.4□□□□□ -0.1
USE1-203ENST00000593597 ZNF790Q6PG37 636 aa14.4□□□□□ -0.1
USE1-203ENST00000593597 SLX4Q8IY92 1834 aa14.39□□□□□ -0.11
USE1-203ENST00000593597 GNAT3A8MTJ3 354 aa14.39□□□□□ -0.11
USE1-203ENST00000593597 TBC1D9BQ66K14 1250 aa14.39□□□□□ -0.11
USE1-203ENST00000593597 RNF181Q9P0P0 153 aa14.39□□□□□ -0.11
USE1-203ENST00000593597 KDM3BQ7LBC6 1761 aa14.39□□□□□ -0.11
USE1-203ENST00000593597 TOMM70O94826 608 aa14.38□□□□□ -0.11
USE1-203ENST00000593597 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
USE1-203ENST00000593597 GAS2L2Q8NHY3 880 aa14.38□□□□□ -0.11
USE1-203ENST00000593597 PRAMEF22A3QJZ6 481 aa14.37□□□□□ -0.11
USE1-203ENST00000593597 A1BGP04217 495 aa14.37□□□□□ -0.11
USE1-203ENST00000593597 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
USE1-203ENST00000593597 TTC5Q8N0Z6 440 aa14.37□□□□□ -0.11
USE1-203ENST00000593597 CCDC24Q8N4L8 307 aa14.37□□□□□ -0.11
USE1-203ENST00000593597 PCNTO95613 3336 aa14.36□□□□□ -0.11
USE1-203ENST00000593597 NFKBIEO00221 500 aa14.36□□□□□ -0.11
USE1-203ENST00000593597 TEFQ10587 303 aa14.36□□□□□ -0.11
USE1-203ENST00000593597 DNAJC5GQ8N7S2 189 aa14.36□□□□□ -0.11
USE1-203ENST00000593597 TBC1D2BQ9UPU7 963 aa14.36□□□□□ -0.11
USE1-203ENST00000593597 CAMTA2O94983 1202 aa14.35□□□□□ -0.11
USE1-203ENST00000593597 STARD3NLO95772 234 aa14.35□□□□□ -0.11
USE1-203ENST00000593597 PPP2R1AP30153 589 aa14.35□□□□□ -0.11
USE1-203ENST00000593597 PIP4K2AP48426 406 aaPredicted RBP14.35□□□□□ -0.11
USE1-203ENST00000593597 HTRA3P83110 453 aa14.35□□□□□ -0.11
USE1-203ENST00000593597 PRR5LQ6MZQ0 368 aa14.35□□□□□ -0.11
USE1-203ENST00000593597 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
USE1-203ENST00000593597 IL6STP40189 918 aaPredicted RBP14.34□□□□□ -0.11
USE1-203ENST00000593597 RBM46Q8TBY0 533 aaKnown RBP14.34□□□□□ -0.11
USE1-203ENST00000593597 USP16Q9Y5T5 823 aa14.34□□□□□ -0.11
USE1-203ENST00000593597 APLP1P51693 650 aa14.33□□□□□ -0.12
USE1-203ENST00000593597 DCTN1Q14203 1278 aa14.33□□□□□ -0.12
USE1-203ENST00000593597 MCM10Q7L590 875 aa14.33□□□□□ -0.12
USE1-203ENST00000593597 TTLL6Q8N841 843 aa14.33□□□□□ -0.12
USE1-203ENST00000593597 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
USE1-203ENST00000593597 RRAGCQ9HB90 399 aa14.33□□□□□ -0.12
USE1-203ENST00000593597 NUP98P52948 1817 aa14.32□□□□□ -0.12
USE1-203ENST00000593597 A0A087WZG4 1122 aa14.32□□□□□ -0.12
USE1-203ENST00000593597 BTBD11A6QL63 1104 aa14.32□□□□□ -0.12
USE1-203ENST00000593597 IFFO2Q5TF58 517 aa14.32□□□□□ -0.12
USE1-203ENST00000593597 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
USE1-203ENST00000593597 TEX13AQ9BXU3 409 aaPredicted RBP14.31□□□□□ -0.12
USE1-203ENST00000593597 KDM2BQ8NHM5 1336 aa14.31□□□□□ -0.12
USE1-203ENST00000593597 POTECB2RU33 542 aa14.3□□□□□ -0.12
USE1-203ENST00000593597 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
USE1-203ENST00000593597 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
USE1-203ENST00000593597 LMNB1P20700 586 aa14.3□□□□□ -0.12
USE1-203ENST00000593597 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
USE1-203ENST00000593597 NBPF10Q6P3W6 841 aaKnown RBP14.3□□□□□ -0.12
USE1-203ENST00000593597 NBPF15Q8N660 670 aa14.3□□□□□ -0.12
USE1-203ENST00000593597 BRIP1Q9BX63 1249 aa14.3□□□□□ -0.12
USE1-203ENST00000593597 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
USE1-203ENST00000593597 H0YIN7 160 aa14.29□□□□□ -0.12
USE1-203ENST00000593597 DZIP3Q86Y13 1208 aaKnown RBP14.29□□□□□ -0.12
USE1-203ENST00000593597 CFAP53Q96M91 514 aa14.29□□□□□ -0.12
USE1-203ENST00000593597 GLTPD2A6NH11 291 aa14.28□□□□□ -0.12
USE1-203ENST00000593597 C21orf2O43822 256 aa14.28□□□□□ -0.12
USE1-203ENST00000593597 FSTL1Q12841 308 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms