RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 CCDC87Q9NVE4 849 aa20.26■□□□□ 0.83
SLC25A39-217ENST00000593166 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
SLC25A39-217ENST00000593166 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
SLC25A39-217ENST00000593166 ZBED9Q6R2W3 1325 aa20.26■□□□□ 0.83
SLC25A39-217ENST00000593166 MYH14Q7Z406 1995 aaKnown RBP20.25■□□□□ 0.83
SLC25A39-217ENST00000593166 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
SLC25A39-217ENST00000593166 INTS5Q6P9B9 1019 aaKnown RBP20.25■□□□□ 0.83
SLC25A39-217ENST00000593166 SOS1Q07889 1333 aaPredicted RBP20.25■□□□□ 0.83
SLC25A39-217ENST00000593166 GNPATO15228 680 aa20.24■□□□□ 0.83
SLC25A39-217ENST00000593166 SLFN5Q08AF3 891 aa20.24■□□□□ 0.83
SLC25A39-217ENST00000593166 TFCP2L1Q9NZI6 479 aa20.24■□□□□ 0.83
SLC25A39-217ENST00000593166 RPS6KA4O75676 772 aa20.23■□□□□ 0.83
SLC25A39-217ENST00000593166 QSER1Q2KHR3 1735 aa20.23■□□□□ 0.83
SLC25A39-217ENST00000593166 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
SLC25A39-217ENST00000593166 ZBTB1Q9Y2K1 713 aa20.23■□□□□ 0.83
SLC25A39-217ENST00000593166 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 SSFA2P28290 1259 aa20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 FLAD1Q8NFF5 587 aa20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 ERBB4Q15303 1308 aa20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
SLC25A39-217ENST00000593166 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
SLC25A39-217ENST00000593166 A1BGP04217 495 aa20.21■□□□□ 0.83
SLC25A39-217ENST00000593166 ADRA2BP18089 450 aa20.21■□□□□ 0.83
SLC25A39-217ENST00000593166 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
SLC25A39-217ENST00000593166 TRMT2AQ8IZ69 625 aaKnown RBP20.21■□□□□ 0.83
SLC25A39-217ENST00000593166 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
SLC25A39-217ENST00000593166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
SLC25A39-217ENST00000593166 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
SLC25A39-217ENST00000593166 EXOSC9Q06265 439 aaKnown RBP20.19■□□□□ 0.82
SLC25A39-217ENST00000593166 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
SLC25A39-217ENST00000593166 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
SLC25A39-217ENST00000593166 PSDA5PKW4 1024 aaPredicted RBP20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 NBPF26B4DH59 902 aa20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 CANXP27824 592 aaKnown RBP20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 HDGFL1Q5TGJ6 251 aa20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 NBPF10Q6P3W6 841 aaKnown RBP20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
SLC25A39-217ENST00000593166 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
SLC25A39-217ENST00000593166 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
SLC25A39-217ENST00000593166 PHF14O94880 888 aa20.16■□□□□ 0.82
SLC25A39-217ENST00000593166 TRAPPC3LQ5T215 181 aa20.16■□□□□ 0.82
SLC25A39-217ENST00000593166 COL15A1P39059 1388 aa20.16■□□□□ 0.82
SLC25A39-217ENST00000593166 CASZ1Q86V15 1759 aa20.16■□□□□ 0.82
SLC25A39-217ENST00000593166 PDIA6Q15084 440 aa20.15■□□□□ 0.82
SLC25A39-217ENST00000593166 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
SLC25A39-217ENST00000593166 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
SLC25A39-217ENST00000593166 A0A087WZG4 1122 aa20.14■□□□□ 0.81
SLC25A39-217ENST00000593166 VAMP4O75379 141 aa20.14■□□□□ 0.81
SLC25A39-217ENST00000593166 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
SLC25A39-217ENST00000593166 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
SLC25A39-217ENST00000593166 DDX21Q9NR30 783 aaKnown RBP eCLIP20.14■□□□□ 0.81
SLC25A39-217ENST00000593166 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
SLC25A39-217ENST00000593166 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
SLC25A39-217ENST00000593166 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
SLC25A39-217ENST00000593166 PDGFDQ9GZP0 370 aaPredicted RBP20.13■□□□□ 0.81
SLC25A39-217ENST00000593166 CHPF2Q9P2E5 772 aa20.13■□□□□ 0.81
SLC25A39-217ENST00000593166 DBF4Q9UBU7 674 aaPredicted RBP20.13■□□□□ 0.81
SLC25A39-217ENST00000593166 RFC4P35249 363 aa20.12■□□□□ 0.81
SLC25A39-217ENST00000593166 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
SLC25A39-217ENST00000593166 C4AP0C0L4 1744 aa20.12■□□□□ 0.81
SLC25A39-217ENST00000593166 USP42Q9H9J4 1324 aaKnown RBP20.11■□□□□ 0.81
SLC25A39-217ENST00000593166 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
SLC25A39-217ENST00000593166 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
SLC25A39-217ENST00000593166 MSH5O43196 834 aa20.1■□□□□ 0.81
SLC25A39-217ENST00000593166 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
SLC25A39-217ENST00000593166 MYL6BP14649 208 aa20.1■□□□□ 0.81
SLC25A39-217ENST00000593166 NARFQ9UHQ1 456 aa20.1■□□□□ 0.81
SLC25A39-217ENST00000593166 ANXA1P04083 346 aa20.09■□□□□ 0.81
SLC25A39-217ENST00000593166 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
SLC25A39-217ENST00000593166 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
SLC25A39-217ENST00000593166 RGL2O15211 777 aa20.08■□□□□ 0.81
SLC25A39-217ENST00000593166 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.81
SLC25A39-217ENST00000593166 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
SLC25A39-217ENST00000593166 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
SLC25A39-217ENST00000593166 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
SLC25A39-217ENST00000593166 ZPR1O75312 459 aa20.07■□□□□ 0.8
SLC25A39-217ENST00000593166 GYS1P13807 737 aa20.07■□□□□ 0.8
SLC25A39-217ENST00000593166 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
SLC25A39-217ENST00000593166 TBC1D2BQ9UPU7 963 aa20.07■□□□□ 0.8
SLC25A39-217ENST00000593166 CAMTA2O94983 1202 aa20.06■□□□□ 0.8
SLC25A39-217ENST00000593166 ZBTB7AO95365 584 aa20.06■□□□□ 0.8
SLC25A39-217ENST00000593166 USPL1Q5W0Q7 1092 aa20.06■□□□□ 0.8
SLC25A39-217ENST00000593166 SCN7AQ01118 1682 aa20.06■□□□□ 0.8
SLC25A39-217ENST00000593166 TTLL7Q6ZT98 887 aa20.05■□□□□ 0.8
SLC25A39-217ENST00000593166 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
SLC25A39-217ENST00000593166 NLGN1Q8N2Q7 840 aa20.05■□□□□ 0.8
SLC25A39-217ENST00000593166 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
SLC25A39-217ENST00000593166 BCL2L12Q9HB09 334 aa20.05■□□□□ 0.8
SLC25A39-217ENST00000593166 MAP3K15Q6ZN16 1313 aa20.04■□□□□ 0.8
SLC25A39-217ENST00000593166 BCORQ6W2J9 1755 aa20.04■□□□□ 0.8
SLC25A39-217ENST00000593166 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
SLC25A39-217ENST00000593166 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
SLC25A39-217ENST00000593166 KIF6Q6ZMV9 814 aa20.04■□□□□ 0.8
SLC25A39-217ENST00000593166 COL24A1Q17RW2 1714 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms