RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 LTN1O94822 1766 aa13.81□□□□□ -0.2
TUBD1-215ENST00000593110 HSPA6P17066 643 aa13.8□□□□□ -0.2
TUBD1-215ENST00000593110 POLD1P28340 1107 aa13.8□□□□□ -0.2
TUBD1-215ENST00000593110 NSD2O96028 1365 aa13.8□□□□□ -0.2
TUBD1-215ENST00000593110 DOT1LQ8TEK3 1739 aa13.79□□□□□ -0.2
TUBD1-215ENST00000593110 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
TUBD1-215ENST00000593110 PBX2P40425 430 aa13.78□□□□□ -0.2
TUBD1-215ENST00000593110 MLLT3P42568 568 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-215ENST00000593110 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
TUBD1-215ENST00000593110 GRIN3BO60391 1043 aa13.77□□□□□ -0.21
TUBD1-215ENST00000593110 IL2RBP14784 551 aa13.77□□□□□ -0.21
TUBD1-215ENST00000593110 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
TUBD1-215ENST00000593110 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
TUBD1-215ENST00000593110 ADAM33Q9BZ11 813 aa13.76□□□□□ -0.21
TUBD1-215ENST00000593110 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
TUBD1-215ENST00000593110 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
TUBD1-215ENST00000593110 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
TUBD1-215ENST00000593110 KCNQ4P56696 695 aa13.75□□□□□ -0.21
TUBD1-215ENST00000593110 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
TUBD1-215ENST00000593110 PTPREP23469 700 aa13.74□□□□□ -0.21
TUBD1-215ENST00000593110 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
TUBD1-215ENST00000593110 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
TUBD1-215ENST00000593110 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-215ENST00000593110 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
TUBD1-215ENST00000593110 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
TUBD1-215ENST00000593110 ARHGAP33O14559 1287 aa13.73□□□□□ -0.21
TUBD1-215ENST00000593110 MAP3K7O43318 606 aa13.73□□□□□ -0.21
TUBD1-215ENST00000593110 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
TUBD1-215ENST00000593110 KCNK17Q96T54 332 aa13.73□□□□□ -0.21
TUBD1-215ENST00000593110 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
TUBD1-215ENST00000593110 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
TUBD1-215ENST00000593110 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
TUBD1-215ENST00000593110 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
TUBD1-215ENST00000593110 C5P01031 1676 aa13.72□□□□□ -0.21
TUBD1-215ENST00000593110 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
TUBD1-215ENST00000593110 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
TUBD1-215ENST00000593110 OSBPP22059 807 aa13.71□□□□□ -0.21
TUBD1-215ENST00000593110 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.21
TUBD1-215ENST00000593110 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
TUBD1-215ENST00000593110 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-215ENST00000593110 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
TUBD1-215ENST00000593110 PSEN2P49810 448 aa13.69□□□□□ -0.22
TUBD1-215ENST00000593110 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
TUBD1-215ENST00000593110 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
TUBD1-215ENST00000593110 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
TUBD1-215ENST00000593110 MEGF6O75095 1541 aa13.69□□□□□ -0.22
TUBD1-215ENST00000593110 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
TUBD1-215ENST00000593110 NME9Q86XW9 330 aa13.68□□□□□ -0.22
TUBD1-215ENST00000593110 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-215ENST00000593110 KRTAP3-3Q9BYR6 98 aa13.68□□□□□ -0.22
TUBD1-215ENST00000593110 KRTAP3-2Q9BYR7 98 aa13.68□□□□□ -0.22
TUBD1-215ENST00000593110 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
TUBD1-215ENST00000593110 C6orf132Q5T0Z8 1188 aa13.67□□□□□ -0.22
TUBD1-215ENST00000593110 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-215ENST00000593110 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
TUBD1-215ENST00000593110 DNAJC5GQ8N7S2 189 aa13.66□□□□□ -0.22
TUBD1-215ENST00000593110 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
TUBD1-215ENST00000593110 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
TUBD1-215ENST00000593110 LSM11P83369 360 aaKnown RBP eCLIP13.65□□□□□ -0.22
TUBD1-215ENST00000593110 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
TUBD1-215ENST00000593110 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
TUBD1-215ENST00000593110 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
TUBD1-215ENST00000593110 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
TUBD1-215ENST00000593110 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
TUBD1-215ENST00000593110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.23
TUBD1-215ENST00000593110 PCNTO95613 3336 aa13.64□□□□□ -0.23
TUBD1-215ENST00000593110 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
TUBD1-215ENST00000593110 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
TUBD1-215ENST00000593110 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
TUBD1-215ENST00000593110 SYTL4Q96C24 671 aaPredicted RBP13.63□□□□□ -0.23
TUBD1-215ENST00000593110 USP47Q96K76 1375 aa13.62□□□□□ -0.23
TUBD1-215ENST00000593110 APLP1P51693 650 aa13.62□□□□□ -0.23
TUBD1-215ENST00000593110 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
TUBD1-215ENST00000593110 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
TUBD1-215ENST00000593110 IP6K1Q92551 441 aa13.62□□□□□ -0.23
TUBD1-215ENST00000593110 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
TUBD1-215ENST00000593110 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
TUBD1-215ENST00000593110 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
TUBD1-215ENST00000593110 COL9A1P20849 921 aa13.59□□□□□ -0.23
TUBD1-215ENST00000593110 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
TUBD1-215ENST00000593110 PXDNLA1KZ92 1463 aa13.59□□□□□ -0.23
TUBD1-215ENST00000593110 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.23
TUBD1-215ENST00000593110 PALLDQ8WX93 1383 aa13.58□□□□□ -0.23
TUBD1-215ENST00000593110 RBM26Q5T8P6 1007 aaKnown RBP13.58□□□□□ -0.24
TUBD1-215ENST00000593110 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
TUBD1-215ENST00000593110 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
TUBD1-215ENST00000593110 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
TUBD1-215ENST00000593110 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
TUBD1-215ENST00000593110 HOXC9P31274 260 aa13.57□□□□□ -0.24
TUBD1-215ENST00000593110 FLAD1Q8NFF5 587 aa13.57□□□□□ -0.24
TUBD1-215ENST00000593110 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
TUBD1-215ENST00000593110 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
TUBD1-215ENST00000593110 ITGB4P16144 1822 aa13.57□□□□□ -0.24
TUBD1-215ENST00000593110 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
TUBD1-215ENST00000593110 TK2O00142 265 aa13.56□□□□□ -0.24
TUBD1-215ENST00000593110 TOMM70O94826 608 aa13.56□□□□□ -0.24
TUBD1-215ENST00000593110 JMYQ8N9B5 988 aa13.56□□□□□ -0.24
TUBD1-215ENST00000593110 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
TUBD1-215ENST00000593110 ADGRD1Q6QNK2 874 aa13.55□□□□□ -0.24
TUBD1-215ENST00000593110 SMIM5Q71RC9 77 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms