RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-242ENST00000593093 PRPF40BQ6NWY9 871 aaKnown RBP17.03■□□□□ 0.32
CIRBP-242ENST00000593093 NRBP1Q9UHY1 535 aa17.03■□□□□ 0.32
CIRBP-242ENST00000593093 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
CIRBP-242ENST00000593093 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
CIRBP-242ENST00000593093 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.32
CIRBP-242ENST00000593093 TNNT1P13805 278 aa17.02■□□□□ 0.31
CIRBP-242ENST00000593093 UVSSAQ2YD98 709 aa17.02■□□□□ 0.31
CIRBP-242ENST00000593093 RASEFQ8IZ41 740 aa17.02■□□□□ 0.31
CIRBP-242ENST00000593093 TRMT1Q9NXH9 659 aaKnown RBP17.02■□□□□ 0.31
CIRBP-242ENST00000593093 MYOM2P54296 1465 aa17.02■□□□□ 0.31
CIRBP-242ENST00000593093 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
CIRBP-242ENST00000593093 F13A1P00488 732 aa17.01■□□□□ 0.31
CIRBP-242ENST00000593093 LARP1BQ659C4 914 aaKnown RBP17.01■□□□□ 0.31
CIRBP-242ENST00000593093 DHX37Q8IY37 1157 aaKnown RBP17.01■□□□□ 0.31
CIRBP-242ENST00000593093 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
CIRBP-242ENST00000593093 AP5Z1O43299 807 aa17.01■□□□□ 0.31
CIRBP-242ENST00000593093 CUL4AQ13619 759 aa17.01■□□□□ 0.31
CIRBP-242ENST00000593093 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
CIRBP-242ENST00000593093 ZFP91Q96JP5 570 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-242ENST00000593093 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
CIRBP-242ENST00000593093 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
CIRBP-242ENST00000593093 LIMCH1Q9UPQ0 1083 aa17■□□□□ 0.31
CIRBP-242ENST00000593093 NUTM2GQ5VZR2 741 aa17■□□□□ 0.31
CIRBP-242ENST00000593093 TNMDQ9H2S6 317 aa17■□□□□ 0.31
CIRBP-242ENST00000593093 RIMS2Q9UQ26 1411 aa17■□□□□ 0.31
CIRBP-242ENST00000593093 LARGE1O95461 756 aa17■□□□□ 0.31
CIRBP-242ENST00000593093 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 LETM1O95202 739 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-242ENST00000593093 CCDC112Q8NEF3 446 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-242ENST00000593093 NUP62CLQ9H1M0 184 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 ZBTB9Q96C00 473 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 GNAI3P08754 354 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
CIRBP-242ENST00000593093 KCNF1Q9H3M0 494 aa16.99■□□□□ 0.31
CIRBP-242ENST00000593093 FLIIQ13045 1269 aa16.98■□□□□ 0.31
CIRBP-242ENST00000593093 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
CIRBP-242ENST00000593093 ANXA1P04083 346 aa16.98■□□□□ 0.31
CIRBP-242ENST00000593093 ANO6Q4KMQ2 910 aa16.98■□□□□ 0.31
CIRBP-242ENST00000593093 KIAA1524Q8TCG1 905 aa16.98■□□□□ 0.31
CIRBP-242ENST00000593093 SNX14Q9Y5W7 946 aa16.98■□□□□ 0.31
CIRBP-242ENST00000593093 MAP3K11Q16584 847 aa16.97■□□□□ 0.31
CIRBP-242ENST00000593093 UTP14CQ5TAP6 766 aaKnown RBP16.97■□□□□ 0.31
CIRBP-242ENST00000593093 DACT1Q9NYF0 836 aa16.97■□□□□ 0.31
CIRBP-242ENST00000593093 RUFY3Q7L099 469 aa16.97■□□□□ 0.31
CIRBP-242ENST00000593093 NUDT16Q96DE0 195 aaKnown RBP16.97■□□□□ 0.31
CIRBP-242ENST00000593093 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
CIRBP-242ENST00000593093 A0A087WWV3 80 aa16.97■□□□□ 0.31
CIRBP-242ENST00000593093 LIG1P18858 919 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
CIRBP-242ENST00000593093 ADGRB3O60242 1522 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 MED14O60244 1454 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.31
CIRBP-242ENST00000593093 PTPRCP08575 1304 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 GOLGA6L19H0YKK7 550 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 CHL1O00533 1208 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 AMPHP49418 695 aa16.96■□□□□ 0.31
CIRBP-242ENST00000593093 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 GTPBP4Q9BZE4 634 aaKnown RBP16.95■□□□□ 0.3
CIRBP-242ENST00000593093 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 ANAPC15P60006 121 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
CIRBP-242ENST00000593093 KRT85P78386 507 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 TYRO3Q06418 890 aa16.95■□□□□ 0.3
CIRBP-242ENST00000593093 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 BECN2A8MW95 431 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 KIF20AO95235 890 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
CIRBP-242ENST00000593093 CYP46A1Q9Y6A2 500 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 CLIP2Q9UDT6 1046 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 ATP10DQ9P241 1426 aa16.94■□□□□ 0.3
CIRBP-242ENST00000593093 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
CIRBP-242ENST00000593093 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-242ENST00000593093 HSPA4P34932 840 aa16.93■□□□□ 0.3
CIRBP-242ENST00000593093 ATP8B2P98198 1209 aa16.93■□□□□ 0.3
CIRBP-242ENST00000593093 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
CIRBP-242ENST00000593093 ERCC4Q92889 916 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-242ENST00000593093 ZNF165P49910 485 aa16.92■□□□□ 0.3
CIRBP-242ENST00000593093 MTHFSDQ2M296 383 aaKnown RBP16.92■□□□□ 0.3
CIRBP-242ENST00000593093 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
CIRBP-242ENST00000593093 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
CIRBP-242ENST00000593093 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CIRBP-242ENST00000593093 H3BQV1 296 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 TTC6Q86TZ1 520 aa16.91■□□□□ 0.3
CIRBP-242ENST00000593093 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms