RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 ARHGAP27Q6ZUM4 889 aa20.71■□□□□ 0.91
APOC4-201ENST00000591600 NARFQ9UHQ1 456 aa20.71■□□□□ 0.91
APOC4-201ENST00000591600 KIF3CO14782 793 aa20.7■□□□□ 0.9
APOC4-201ENST00000591600 USPL1Q5W0Q7 1092 aa20.7■□□□□ 0.9
APOC4-201ENST00000591600 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
APOC4-201ENST00000591600 COL15A1P39059 1388 aa20.69■□□□□ 0.9
APOC4-201ENST00000591600 HSPA6P17066 643 aa20.68■□□□□ 0.9
APOC4-201ENST00000591600 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
APOC4-201ENST00000591600 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
APOC4-201ENST00000591600 ZBTB1Q9Y2K1 713 aa20.68■□□□□ 0.9
APOC4-201ENST00000591600 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
APOC4-201ENST00000591600 U2SURPO15042 1029 aaKnown RBP20.67■□□□□ 0.9
APOC4-201ENST00000591600 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
APOC4-201ENST00000591600 STARD3NLO95772 234 aa20.66■□□□□ 0.9
APOC4-201ENST00000591600 NFIXQ14938 502 aa20.66■□□□□ 0.9
APOC4-201ENST00000591600 TTC5Q8N0Z6 440 aa20.66■□□□□ 0.9
APOC4-201ENST00000591600 TEFQ10587 303 aa20.65■□□□□ 0.9
APOC4-201ENST00000591600 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
APOC4-201ENST00000591600 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
APOC4-201ENST00000591600 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
APOC4-201ENST00000591600 CEMIPQ8WUJ3 1361 aa20.64■□□□□ 0.89
APOC4-201ENST00000591600 CHRNA5P30532 468 aa20.64■□□□□ 0.89
APOC4-201ENST00000591600 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
APOC4-201ENST00000591600 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
APOC4-201ENST00000591600 TOMM70O94826 608 aa20.63■□□□□ 0.89
APOC4-201ENST00000591600 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
APOC4-201ENST00000591600 A0A087WZG4 1122 aa20.62■□□□□ 0.89
APOC4-201ENST00000591600 CANXP27824 592 aaKnown RBP20.62■□□□□ 0.89
APOC4-201ENST00000591600 C9orf131Q5VYM1 1079 aa20.62■□□□□ 0.89
APOC4-201ENST00000591600 CFAP53Q96M91 514 aa20.62■□□□□ 0.89
APOC4-201ENST00000591600 SCN7AQ01118 1682 aa20.61■□□□□ 0.89
APOC4-201ENST00000591600 SERPINB2P05120 415 aa20.61■□□□□ 0.89
APOC4-201ENST00000591600 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
APOC4-201ENST00000591600 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
APOC4-201ENST00000591600 CCDC88AQ3V6T2 1871 aa20.6■□□□□ 0.89
APOC4-201ENST00000591600 ANKRD31Q8N7Z5 1873 aa20.59■□□□□ 0.89
APOC4-201ENST00000591600 IL6STP40189 918 aaPredicted RBP20.59■□□□□ 0.89
APOC4-201ENST00000591600 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
APOC4-201ENST00000591600 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
APOC4-201ENST00000591600 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.89
APOC4-201ENST00000591600 PRKAR2BP31323 418 aa20.58■□□□□ 0.89
APOC4-201ENST00000591600 NMRK2Q9NPI5 230 aa20.58■□□□□ 0.89
APOC4-201ENST00000591600 NUDCQ9Y266 331 aa20.58■□□□□ 0.89
APOC4-201ENST00000591600 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
APOC4-201ENST00000591600 ZC3H4Q9UPT8 1303 aaKnown RBP20.56■□□□□ 0.88
APOC4-201ENST00000591600 RNF181Q9P0P0 153 aa20.56■□□□□ 0.88
APOC4-201ENST00000591600 PDZRN3Q9UPQ7 1066 aa20.56■□□□□ 0.88
APOC4-201ENST00000591600 BCORQ6W2J9 1755 aa20.56■□□□□ 0.88
APOC4-201ENST00000591600 BTBD11A6QL63 1104 aa20.55■□□□□ 0.88
APOC4-201ENST00000591600 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
APOC4-201ENST00000591600 APLP1P51693 650 aa20.55■□□□□ 0.88
APOC4-201ENST00000591600 TTLL6Q8N841 843 aa20.55■□□□□ 0.88
APOC4-201ENST00000591600 H0YIN7 160 aa20.54■□□□□ 0.88
APOC4-201ENST00000591600 RBM46Q8TBY0 533 aaKnown RBP20.54■□□□□ 0.88
APOC4-201ENST00000591600 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
APOC4-201ENST00000591600 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
APOC4-201ENST00000591600 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
APOC4-201ENST00000591600 DICER1Q9UPY3 1922 aaKnown RBP20.53■□□□□ 0.88
APOC4-201ENST00000591600 A1BGP04217 495 aa20.52■□□□□ 0.88
APOC4-201ENST00000591600 U2AF1L5P0DN76 240 aaPredicted RBP20.52■□□□□ 0.88
APOC4-201ENST00000591600 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
APOC4-201ENST00000591600 BICDL1Q6ZP65 573 aa20.52■□□□□ 0.88
APOC4-201ENST00000591600 BRIP1Q9BX63 1249 aa20.52■□□□□ 0.88
APOC4-201ENST00000591600 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
APOC4-201ENST00000591600 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.87
APOC4-201ENST00000591600 COL11A2P13942 1736 aaPredicted RBP20.51■□□□□ 0.87
APOC4-201ENST00000591600 WDR90Q96KV7 1748 aa20.51■□□□□ 0.87
APOC4-201ENST00000591600 KCNQ3O43525 872 aa20.51■□□□□ 0.87
APOC4-201ENST00000591600 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
APOC4-201ENST00000591600 LMNB1P20700 586 aa20.51■□□□□ 0.87
APOC4-201ENST00000591600 PDE6BP35913 854 aa20.51■□□□□ 0.87
APOC4-201ENST00000591600 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
APOC4-201ENST00000591600 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
APOC4-201ENST00000591600 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
APOC4-201ENST00000591600 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
APOC4-201ENST00000591600 ARFGEF2Q9Y6D5 1785 aa20.49■□□□□ 0.87
APOC4-201ENST00000591600 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
APOC4-201ENST00000591600 FSTL1Q12841 308 aa20.49■□□□□ 0.87
APOC4-201ENST00000591600 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
APOC4-201ENST00000591600 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
APOC4-201ENST00000591600 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
APOC4-201ENST00000591600 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
APOC4-201ENST00000591600 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
APOC4-201ENST00000591600 SNRPA1P09661 255 aaKnown RBP20.48■□□□□ 0.87
APOC4-201ENST00000591600 RASSF7Q02833 373 aa20.48■□□□□ 0.87
APOC4-201ENST00000591600 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
APOC4-201ENST00000591600 CACNA1SQ13698 1873 aa20.47■□□□□ 0.87
APOC4-201ENST00000591600 RGL2O15211 777 aa20.47■□□□□ 0.87
APOC4-201ENST00000591600 PRELPP51888 382 aa20.47■□□□□ 0.87
APOC4-201ENST00000591600 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
APOC4-201ENST00000591600 MCM10Q7L590 875 aa20.47■□□□□ 0.87
APOC4-201ENST00000591600 RRAGCQ9HB90 399 aa20.47■□□□□ 0.87
APOC4-201ENST00000591600 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
APOC4-201ENST00000591600 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
APOC4-201ENST00000591600 GLTPD2A6NH11 291 aa20.45■□□□□ 0.86
APOC4-201ENST00000591600 NFKBIEO00221 500 aa20.45■□□□□ 0.86
APOC4-201ENST00000591600 IFFO2Q5TF58 517 aa20.45■□□□□ 0.86
APOC4-201ENST00000591600 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
APOC4-201ENST00000591600 SLX4Q8IY92 1834 aa20.45■□□□□ 0.86
APOC4-201ENST00000591600 ZNF622Q969S3 477 aaKnown RBP eCLIP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms