RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 MRC1P22897 1456 aa18.02■□□□□ 0.48
NPC1-212ENST00000591107 DDR1Q08345 913 aa18.02■□□□□ 0.48
NPC1-212ENST00000591107 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
NPC1-212ENST00000591107 LGR6Q9HBX8 967 aa18.02■□□□□ 0.48
NPC1-212ENST00000591107 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
NPC1-212ENST00000591107 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
NPC1-212ENST00000591107 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
NPC1-212ENST00000591107 DNAJC10Q8IXB1 793 aa18.01■□□□□ 0.47
NPC1-212ENST00000591107 VASPP50552 380 aaPredicted RBP18■□□□□ 0.47
NPC1-212ENST00000591107 NLGN1Q8N2Q7 840 aa18■□□□□ 0.47
NPC1-212ENST00000591107 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
NPC1-212ENST00000591107 PARP3Q9Y6F1 533 aa18■□□□□ 0.47
NPC1-212ENST00000591107 USP42Q9H9J4 1324 aaKnown RBP17.99■□□□□ 0.47
NPC1-212ENST00000591107 SSUH2Q9Y2M2 353 aa17.99■□□□□ 0.47
NPC1-212ENST00000591107 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
NPC1-212ENST00000591107 FCHSD2O94868 740 aa17.98■□□□□ 0.47
NPC1-212ENST00000591107 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
NPC1-212ENST00000591107 KIF3CO14782 793 aa17.97■□□□□ 0.47
NPC1-212ENST00000591107 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
NPC1-212ENST00000591107 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
NPC1-212ENST00000591107 ARHGAP27Q6ZUM4 889 aa17.97■□□□□ 0.47
NPC1-212ENST00000591107 SLC52A2Q9HAB3 445 aa17.97■□□□□ 0.47
NPC1-212ENST00000591107 ARFGEF1Q9Y6D6 1849 aa17.97■□□□□ 0.47
NPC1-212ENST00000591107 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
NPC1-212ENST00000591107 RNMTO43148 476 aaKnown RBP17.96■□□□□ 0.47
NPC1-212ENST00000591107 CHRNA5P30532 468 aa17.96■□□□□ 0.47
NPC1-212ENST00000591107 TGFB2P61812 414 aa17.96■□□□□ 0.47
NPC1-212ENST00000591107 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
NPC1-212ENST00000591107 KCNA3P22001 575 aa17.95■□□□□ 0.46
NPC1-212ENST00000591107 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
NPC1-212ENST00000591107 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
NPC1-212ENST00000591107 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
NPC1-212ENST00000591107 COL15A1P39059 1388 aa17.93■□□□□ 0.46
NPC1-212ENST00000591107 POLRMTO00411 1230 aaKnown RBP17.93■□□□□ 0.46
NPC1-212ENST00000591107 HSPA6P17066 643 aa17.93■□□□□ 0.46
NPC1-212ENST00000591107 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
NPC1-212ENST00000591107 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
NPC1-212ENST00000591107 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
NPC1-212ENST00000591107 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
NPC1-212ENST00000591107 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
NPC1-212ENST00000591107 NRXN2Q9P2S2 1712 aa17.9■□□□□ 0.46
NPC1-212ENST00000591107 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
NPC1-212ENST00000591107 U2SURPO15042 1029 aaKnown RBP17.9■□□□□ 0.46
NPC1-212ENST00000591107 C9orf131Q5VYM1 1079 aa17.9■□□□□ 0.46
NPC1-212ENST00000591107 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
NPC1-212ENST00000591107 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
NPC1-212ENST00000591107 RASSF7Q02833 373 aa17.89■□□□□ 0.45
NPC1-212ENST00000591107 NFIXQ14938 502 aa17.89■□□□□ 0.45
NPC1-212ENST00000591107 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
NPC1-212ENST00000591107 DLEC1Q9Y238 1755 aa17.89■□□□□ 0.45
NPC1-212ENST00000591107 ZPR1O75312 459 aa17.88■□□□□ 0.45
NPC1-212ENST00000591107 DALRD3Q5D0E6 543 aaKnown RBP17.88■□□□□ 0.45
NPC1-212ENST00000591107 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
NPC1-212ENST00000591107 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
NPC1-212ENST00000591107 TM4SF1P30408 202 aa17.87■□□□□ 0.45
NPC1-212ENST00000591107 BICDL1Q6ZP65 573 aa17.87■□□□□ 0.45
NPC1-212ENST00000591107 RNF181Q9P0P0 153 aa17.86■□□□□ 0.45
NPC1-212ENST00000591107 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
NPC1-212ENST00000591107 ZNF330Q9Y3S2 320 aaPredicted RBP17.86■□□□□ 0.45
NPC1-212ENST00000591107 SBF1O95248 1867 aa17.86■□□□□ 0.45
NPC1-212ENST00000591107 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
NPC1-212ENST00000591107 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
NPC1-212ENST00000591107 CCDC24Q8N4L8 307 aa17.85■□□□□ 0.45
NPC1-212ENST00000591107 ZNF496Q96IT1 587 aaPredicted RBP17.84■□□□□ 0.45
NPC1-212ENST00000591107 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
NPC1-212ENST00000591107 HTRA3P83110 453 aa17.83■□□□□ 0.44
NPC1-212ENST00000591107 TTC5Q8N0Z6 440 aa17.83■□□□□ 0.44
NPC1-212ENST00000591107 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
NPC1-212ENST00000591107 KCNQ3O43525 872 aa17.82■□□□□ 0.44
NPC1-212ENST00000591107 SERPINB2P05120 415 aa17.82■□□□□ 0.44
NPC1-212ENST00000591107 PRELPP51888 382 aa17.82■□□□□ 0.44
NPC1-212ENST00000591107 TNRC6CQ9HCJ0 1690 aaKnown RBP17.82■□□□□ 0.44
NPC1-212ENST00000591107 HEG1Q9ULI3 1381 aa17.81■□□□□ 0.44
NPC1-212ENST00000591107 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
NPC1-212ENST00000591107 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
NPC1-212ENST00000591107 CACNA1SQ13698 1873 aa17.81■□□□□ 0.44
NPC1-212ENST00000591107 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
NPC1-212ENST00000591107 NPC1L1Q9UHC9 1359 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 TOMM70O94826 608 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 TEFQ10587 303 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 IFNLR1Q8IU57 520 aaPredicted RBP17.8■□□□□ 0.44
NPC1-212ENST00000591107 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
NPC1-212ENST00000591107 GNAT3A8MTJ3 354 aa17.79■□□□□ 0.44
NPC1-212ENST00000591107 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
NPC1-212ENST00000591107 ZNF790Q6PG37 636 aa17.79■□□□□ 0.44
NPC1-212ENST00000591107 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
NPC1-212ENST00000591107 TBC1D2BQ9UPU7 963 aa17.79■□□□□ 0.44
NPC1-212ENST00000591107 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
NPC1-212ENST00000591107 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
NPC1-212ENST00000591107 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
NPC1-212ENST00000591107 A1BGP04217 495 aa17.77■□□□□ 0.44
NPC1-212ENST00000591107 RRAGCQ9HB90 399 aa17.77■□□□□ 0.44
NPC1-212ENST00000591107 CEMIPQ8WUJ3 1361 aa17.77■□□□□ 0.43
NPC1-212ENST00000591107 STARD3NLO95772 234 aa17.76■□□□□ 0.43
NPC1-212ENST00000591107 APLP1P51693 650 aa17.76■□□□□ 0.43
NPC1-212ENST00000591107 NFKBIEO00221 500 aa17.75■□□□□ 0.43
NPC1-212ENST00000591107 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms