RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
PTBP1-216ENST00000590887 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
PTBP1-216ENST00000590887 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
PTBP1-216ENST00000590887 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
PTBP1-216ENST00000590887 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
PTBP1-216ENST00000590887 EP400Q96L91 3159 aa16.38■□□□□ 0.21
PTBP1-216ENST00000590887 RGS12O14924 1447 aa16.38■□□□□ 0.21
PTBP1-216ENST00000590887 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
PTBP1-216ENST00000590887 ITGB4P16144 1822 aa16.38■□□□□ 0.21
PTBP1-216ENST00000590887 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
PTBP1-216ENST00000590887 PXDNLA1KZ92 1463 aa16.36■□□□□ 0.21
PTBP1-216ENST00000590887 STARD3NLO95772 234 aa16.36■□□□□ 0.21
PTBP1-216ENST00000590887 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
PTBP1-216ENST00000590887 PIGBQ92521 554 aa16.36■□□□□ 0.21
PTBP1-216ENST00000590887 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
PTBP1-216ENST00000590887 PAPPAQ13219 1627 aa16.36■□□□□ 0.21
PTBP1-216ENST00000590887 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
PTBP1-216ENST00000590887 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
PTBP1-216ENST00000590887 GNAI3P08754 354 aa16.35■□□□□ 0.21
PTBP1-216ENST00000590887 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
PTBP1-216ENST00000590887 MARCH10Q8NA82 808 aaPredicted RBP16.35■□□□□ 0.21
PTBP1-216ENST00000590887 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
PTBP1-216ENST00000590887 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
PTBP1-216ENST00000590887 LAMB4A4D0S4 1761 aa16.35■□□□□ 0.21
PTBP1-216ENST00000590887 BCL9O00512 1426 aa16.35■□□□□ 0.21
PTBP1-216ENST00000590887 GLI3P10071 1580 aa16.34■□□□□ 0.21
PTBP1-216ENST00000590887 ONECUT3O60422 494 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-216ENST00000590887 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
PTBP1-216ENST00000590887 G2E3Q7L622 706 aa16.34■□□□□ 0.21
PTBP1-216ENST00000590887 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
PTBP1-216ENST00000590887 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
PTBP1-216ENST00000590887 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.21
PTBP1-216ENST00000590887 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
PTBP1-216ENST00000590887 KSR2Q6VAB6 950 aa16.33■□□□□ 0.2
PTBP1-216ENST00000590887 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTBP1-216ENST00000590887 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
PTBP1-216ENST00000590887 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
PTBP1-216ENST00000590887 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
PTBP1-216ENST00000590887 SRCIN1Q9C0H9 1055 aa16.32■□□□□ 0.2
PTBP1-216ENST00000590887 PHAXQ9H814 394 aaKnown RBP16.32■□□□□ 0.2
PTBP1-216ENST00000590887 USP16Q9Y5T5 823 aa16.32■□□□□ 0.2
PTBP1-216ENST00000590887 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
PTBP1-216ENST00000590887 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
PTBP1-216ENST00000590887 HDAC1Q13547 482 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-216ENST00000590887 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
PTBP1-216ENST00000590887 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-216ENST00000590887 C5P01031 1676 aa16.3■□□□□ 0.2
PTBP1-216ENST00000590887 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
PTBP1-216ENST00000590887 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
PTBP1-216ENST00000590887 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
PTBP1-216ENST00000590887 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 PI4KAP2A4QPH2 592 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 HMMRO75330 724 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 MYL6BP14649 208 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 PI4KAP1Q8N8J0 262 aa16.29■□□□□ 0.2
PTBP1-216ENST00000590887 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-216ENST00000590887 KDM2BQ8NHM5 1336 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 F6X3S4 739 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 GNAI2P04899 355 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 PDIA6Q15084 440 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 PCDHB15Q9Y5E8 787 aa16.28■□□□□ 0.2
PTBP1-216ENST00000590887 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-216ENST00000590887 AIMP1Q12904 312 aaKnown RBP16.27■□□□□ 0.2
PTBP1-216ENST00000590887 LINS1Q8NG48 757 aa16.27■□□□□ 0.2
PTBP1-216ENST00000590887 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
PTBP1-216ENST00000590887 ACSBG1Q96GR2 724 aa16.27■□□□□ 0.2
PTBP1-216ENST00000590887 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-216ENST00000590887 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
PTBP1-216ENST00000590887 UBTFL1P0CB47 393 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-216ENST00000590887 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
PTBP1-216ENST00000590887 BRWD3Q6RI45 1802 aa16.25■□□□□ 0.19
PTBP1-216ENST00000590887 ANXA1P04083 346 aa16.25■□□□□ 0.19
PTBP1-216ENST00000590887 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
PTBP1-216ENST00000590887 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
PTBP1-216ENST00000590887 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
PTBP1-216ENST00000590887 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
PTBP1-216ENST00000590887 FAM196AQ6ZSG2 479 aa16.24■□□□□ 0.19
PTBP1-216ENST00000590887 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
PTBP1-216ENST00000590887 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-216ENST00000590887 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-216ENST00000590887 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 IGHDP01880 384 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 A1BGP04217 495 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 SIK1P57059 783 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 ADCY9O60503 1353 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
PTBP1-216ENST00000590887 ZNF831Q5JPB2 1677 aa16.22■□□□□ 0.19
PTBP1-216ENST00000590887 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-216ENST00000590887 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
PTBP1-216ENST00000590887 MEIS3Q99687 375 aa16.22■□□□□ 0.19
PTBP1-216ENST00000590887 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
PTBP1-216ENST00000590887 CCDC125Q86Z20 511 aa16.21■□□□□ 0.19
PTBP1-216ENST00000590887 NHSQ6T4R5 1651 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms