RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 RASA1P20936 1047 aa12.28□□□□□ -0.44
NPC1-209ENST00000590723 CLDN10P78369 228 aa12.28□□□□□ -0.44
NPC1-209ENST00000590723 NBPF1Q3BBV0 1214 aa12.28□□□□□ -0.44
NPC1-209ENST00000590723 GPR161Q8N6U8 529 aaKnown RBP12.28□□□□□ -0.44
NPC1-209ENST00000590723 ZSCAN1Q8NBB4 408 aa12.28□□□□□ -0.44
NPC1-209ENST00000590723 NUCKS1Q9H1E3 243 aaKnown RBP12.28□□□□□ -0.44
NPC1-209ENST00000590723 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
NPC1-209ENST00000590723 M0R2N6 131 aa12.27□□□□□ -0.45
NPC1-209ENST00000590723 PLA2G4AP47712 749 aa12.27□□□□□ -0.45
NPC1-209ENST00000590723 SIX5Q8N196 739 aa12.27□□□□□ -0.45
NPC1-209ENST00000590723 CUEDC1Q9NWM3 386 aaPredicted RBP12.27□□□□□ -0.45
NPC1-209ENST00000590723 ZBTB7BO15156 539 aaPredicted RBP12.26□□□□□ -0.45
NPC1-209ENST00000590723 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
NPC1-209ENST00000590723 DBN1Q16643 649 aa12.26□□□□□ -0.45
NPC1-209ENST00000590723 EFHC2Q5JST6 749 aa12.26□□□□□ -0.45
NPC1-209ENST00000590723 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
NPC1-209ENST00000590723 GPAMQ9HCL2 828 aa12.26□□□□□ -0.45
NPC1-209ENST00000590723 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
NPC1-209ENST00000590723 CNTNAP3BQ96NU0 1288 aa12.25□□□□□ -0.45
NPC1-209ENST00000590723 CNTNAP3Q9BZ76 1288 aa12.25□□□□□ -0.45
NPC1-209ENST00000590723 SCHIP1Q9P0W5 487 aaPredicted RBP12.25□□□□□ -0.45
NPC1-209ENST00000590723 CHMP3Q9Y3E7 222 aa12.25□□□□□ -0.45
NPC1-209ENST00000590723 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
NPC1-209ENST00000590723 MSX1P28360 303 aa12.24□□□□□ -0.45
NPC1-209ENST00000590723 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
NPC1-209ENST00000590723 AIDAQ96BJ3 306 aa12.24□□□□□ -0.45
NPC1-209ENST00000590723 ZNF594Q96JF6 807 aaPredicted RBP12.24□□□□□ -0.45
NPC1-209ENST00000590723 PHF24Q9UPV7 400 aa12.24□□□□□ -0.45
NPC1-209ENST00000590723 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
NPC1-209ENST00000590723 IQSEC3Q9UPP2 1182 aaPredicted RBP12.23□□□□□ -0.45
NPC1-209ENST00000590723 KIAA1024Q9UPX6 916 aa12.23□□□□□ -0.45
NPC1-209ENST00000590723 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
NPC1-209ENST00000590723 GTPBP3Q969Y2 492 aaKnown RBP12.22□□□□□ -0.45
NPC1-209ENST00000590723 CRISPLD1Q9H336 500 aa12.22□□□□□ -0.45
NPC1-209ENST00000590723 ZDHHC3Q9NYG2 299 aa12.22□□□□□ -0.45
NPC1-209ENST00000590723 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
NPC1-209ENST00000590723 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
NPC1-209ENST00000590723 SEC13P55735 322 aa12.21□□□□□ -0.45
NPC1-209ENST00000590723 FIGNL1Q6PIW4 674 aa12.2□□□□□ -0.46
NPC1-209ENST00000590723 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
NPC1-209ENST00000590723 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 EPHA4P54764 986 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 FOXK2Q01167 660 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 KRT76Q01546 638 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 TEAD4Q15561 434 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 KANK4Q5T7N3 995 aaPredicted RBP12.19□□□□□ -0.46
NPC1-209ENST00000590723 SLC9A9Q8IVB4 645 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 CFHR5Q9BXR6 569 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 RUBCNLQ9H714 662 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
NPC1-209ENST00000590723 CHD1O14646 1710 aa12.18□□□□□ -0.46
NPC1-209ENST00000590723 SRSF11Q05519 484 aaKnown RBP12.18□□□□□ -0.46
NPC1-209ENST00000590723 ARSJQ5FYB0 599 aaPredicted RBP12.18□□□□□ -0.46
NPC1-209ENST00000590723 RNFT1Q5M7Z0 435 aa12.18□□□□□ -0.46
NPC1-209ENST00000590723 CUX1P39880 1505 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 POLA1P09884 1462 aaPredicted RBP12.17□□□□□ -0.46
NPC1-209ENST00000590723 GPR25O00155 361 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 PSMA6P60900 246 aaKnown RBP12.17□□□□□ -0.46
NPC1-209ENST00000590723 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 ERICH6Q7L0X2 663 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 NLRP8Q86W28 1048 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 ZNF295-AS1Q8N0V1 137 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
NPC1-209ENST00000590723 ZNF232Q9UNY5 417 aa12.17□□□□□ -0.46
NPC1-209ENST00000590723 SERTM1A2A2V5 107 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L15C9J2P7 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L10C9JJH3 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L13C9JLJ4 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L11C9JVI0 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L21D6R901 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L18D6R9N7 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L22D6RA61 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L17D6RBQ6 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L19D6RCP7 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L20D6RJB6 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 NOS2P35228 1153 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 USP17L24Q0WX57 530 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 PTK7Q13308 1070 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
NPC1-209ENST00000590723 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
NPC1-209ENST00000590723 SLURP2P0DP57 97 aa12.15□□□□□ -0.46
NPC1-209ENST00000590723 MX2P20592 715 aa12.15□□□□□ -0.46
NPC1-209ENST00000590723 ANKMY2Q8IV38 441 aa12.15□□□□□ -0.46
NPC1-209ENST00000590723 GPC6Q9Y625 555 aaPredicted RBP12.15□□□□□ -0.46
NPC1-209ENST00000590723 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
NPC1-209ENST00000590723 ATP4AP20648 1035 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 RFX1P22670 979 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 DPYDQ12882 1025 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 GAS6Q14393 721 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 CRTC2Q53ET0 693 aaPredicted RBP12.14□□□□□ -0.47
NPC1-209ENST00000590723 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 TSEN2Q8NCE0 465 aaKnown RBP12.14□□□□□ -0.47
NPC1-209ENST00000590723 SERPINA10Q9UK55 444 aa12.14□□□□□ -0.47
NPC1-209ENST00000590723 ATXN7L1Q9ULK2 861 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms