RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
CTDP1-206ENST00000590635 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
CTDP1-206ENST00000590635 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
CTDP1-206ENST00000590635 VIRMAQ69YN4 1812 aaKnown RBP16■□□□□ 0.15
CTDP1-206ENST00000590635 USP42Q9H9J4 1324 aaKnown RBP15.99■□□□□ 0.15
CTDP1-206ENST00000590635 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
CTDP1-206ENST00000590635 IL6STP40189 918 aaPredicted RBP15.99■□□□□ 0.15
CTDP1-206ENST00000590635 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
CTDP1-206ENST00000590635 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
CTDP1-206ENST00000590635 PARP3Q9Y6F1 533 aa15.99■□□□□ 0.15
CTDP1-206ENST00000590635 KCNQ3O43525 872 aa15.98■□□□□ 0.15
CTDP1-206ENST00000590635 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
CTDP1-206ENST00000590635 GPR162Q16538 588 aa15.98■□□□□ 0.15
CTDP1-206ENST00000590635 TJP1Q07157 1748 aa15.97■□□□□ 0.15
CTDP1-206ENST00000590635 MYH14Q7Z406 1995 aaKnown RBP15.97■□□□□ 0.15
CTDP1-206ENST00000590635 SIPA1L3O60292 1781 aaPredicted RBP15.97■□□□□ 0.15
CTDP1-206ENST00000590635 UBR2Q8IWV8 1755 aa15.97■□□□□ 0.15
CTDP1-206ENST00000590635 COL15A1P39059 1388 aa15.97■□□□□ 0.15
CTDP1-206ENST00000590635 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
CTDP1-206ENST00000590635 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
CTDP1-206ENST00000590635 GRIN3BO60391 1043 aa15.95■□□□□ 0.14
CTDP1-206ENST00000590635 TGFB2P61812 414 aa15.95■□□□□ 0.14
CTDP1-206ENST00000590635 FKBP8Q14318 412 aa15.95■□□□□ 0.14
CTDP1-206ENST00000590635 USPL1Q5W0Q7 1092 aa15.95■□□□□ 0.14
CTDP1-206ENST00000590635 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CTDP1-206ENST00000590635 SRP68Q9UHB9 627 aaKnown RBP15.95■□□□□ 0.14
CTDP1-206ENST00000590635 A1BGP04217 495 aa15.94■□□□□ 0.14
CTDP1-206ENST00000590635 TM4SF1P30408 202 aa15.94■□□□□ 0.14
CTDP1-206ENST00000590635 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
CTDP1-206ENST00000590635 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
CTDP1-206ENST00000590635 TSPYL4Q9UJ04 414 aa15.94■□□□□ 0.14
CTDP1-206ENST00000590635 GIGYF1O75420 1035 aaPredicted RBP15.93■□□□□ 0.14
CTDP1-206ENST00000590635 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
CTDP1-206ENST00000590635 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
CTDP1-206ENST00000590635 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
CTDP1-206ENST00000590635 CALD1Q05682 793 aaKnown RBP15.92■□□□□ 0.14
CTDP1-206ENST00000590635 RRP7AQ9Y3A4 280 aaKnown RBP15.92■□□□□ 0.14
CTDP1-206ENST00000590635 RGL2O15211 777 aa15.91■□□□□ 0.14
CTDP1-206ENST00000590635 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
CTDP1-206ENST00000590635 YY1P25490 414 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 MRS2Q9HD23 443 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 TBC1D2BQ9UPU7 963 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 ZNF652Q9Y2D9 606 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
CTDP1-206ENST00000590635 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
CTDP1-206ENST00000590635 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
CTDP1-206ENST00000590635 CHL1O00533 1208 aa15.89■□□□□ 0.13
CTDP1-206ENST00000590635 APAF1O14727 1248 aa15.89■□□□□ 0.13
CTDP1-206ENST00000590635 NFIXQ14938 502 aa15.89■□□□□ 0.13
CTDP1-206ENST00000590635 DZIP3Q86Y13 1208 aaKnown RBP15.89■□□□□ 0.13
CTDP1-206ENST00000590635 BCL2L12Q9HB09 334 aa15.89■□□□□ 0.13
CTDP1-206ENST00000590635 ERBB4Q15303 1308 aa15.89■□□□□ 0.13
CTDP1-206ENST00000590635 DDR1Q08345 913 aa15.88■□□□□ 0.13
CTDP1-206ENST00000590635 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
CTDP1-206ENST00000590635 C4AP0C0L4 1744 aa15.88■□□□□ 0.13
CTDP1-206ENST00000590635 SERPINB2P05120 415 aa15.87■□□□□ 0.13
CTDP1-206ENST00000590635 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
CTDP1-206ENST00000590635 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
CTDP1-206ENST00000590635 C10orf71Q711Q0 1435 aa15.86■□□□□ 0.13
CTDP1-206ENST00000590635 NBPF26B4DH59 902 aa15.86■□□□□ 0.13
CTDP1-206ENST00000590635 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
CTDP1-206ENST00000590635 NBPF10Q6P3W6 841 aaKnown RBP15.86■□□□□ 0.13
CTDP1-206ENST00000590635 NBPF15Q8N660 670 aa15.86■□□□□ 0.13
CTDP1-206ENST00000590635 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
CTDP1-206ENST00000590635 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
CTDP1-206ENST00000590635 YBX3P16989 372 aaKnown RBP eCLIP15.85■□□□□ 0.13
CTDP1-206ENST00000590635 CCDC184Q52MB2 194 aa15.85■□□□□ 0.13
CTDP1-206ENST00000590635 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
CTDP1-206ENST00000590635 UTRNP46939 3433 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 A0A0G2JLW4 131 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 HOXB7P09629 217 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 DPEP1P16444 411 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 GNAI1P63096 354 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 TBC1D9BQ66K14 1250 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 BICDL1Q6ZP65 573 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 PIM2Q9P1W9 311 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 CARMIL3Q8ND23 1372 aa15.84■□□□□ 0.13
CTDP1-206ENST00000590635 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
CTDP1-206ENST00000590635 NPHP1O15259 732 aa15.83■□□□□ 0.12
CTDP1-206ENST00000590635 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-206ENST00000590635 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
CTDP1-206ENST00000590635 KIF6Q6ZMV9 814 aa15.83■□□□□ 0.12
CTDP1-206ENST00000590635 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
CTDP1-206ENST00000590635 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
CTDP1-206ENST00000590635 PXDNLA1KZ92 1463 aa15.82■□□□□ 0.12
CTDP1-206ENST00000590635 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
CTDP1-206ENST00000590635 MYL6BP14649 208 aa15.81■□□□□ 0.12
CTDP1-206ENST00000590635 PDE6BP35913 854 aa15.81■□□□□ 0.12
CTDP1-206ENST00000590635 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
CTDP1-206ENST00000590635 TPTE2Q6XPS3 522 aa15.81■□□□□ 0.12
CTDP1-206ENST00000590635 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
CTDP1-206ENST00000590635 BRIP1Q9BX63 1249 aa15.81■□□□□ 0.12
CTDP1-206ENST00000590635 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
CTDP1-206ENST00000590635 KIF13BQ9NQT8 1826 aa15.8■□□□□ 0.12
CTDP1-206ENST00000590635 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
CTDP1-206ENST00000590635 H0YIN7 160 aa15.8■□□□□ 0.12
CTDP1-206ENST00000590635 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms