RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 DYNC1I1O14576 645 aa15.46■□□□□ 0.07
LINC00662-206ENST00000590523 NLRP6P59044 892 aa15.46■□□□□ 0.07
LINC00662-206ENST00000590523 LRSAM1Q6UWE0 723 aa15.46■□□□□ 0.07
LINC00662-206ENST00000590523 GPT2Q8TD30 523 aa15.46■□□□□ 0.07
LINC00662-206ENST00000590523 RILPL2Q969X0 211 aa15.46■□□□□ 0.07
LINC00662-206ENST00000590523 SYAP1Q96A49 352 aaPredicted RBP15.46■□□□□ 0.07
LINC00662-206ENST00000590523 PDLIM2Q96JY6 352 aa15.46■□□□□ 0.07
LINC00662-206ENST00000590523 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
LINC00662-206ENST00000590523 MARF1Q9Y4F3 1742 aaKnown RBP15.46■□□□□ 0.06
LINC00662-206ENST00000590523 HOXB7P09629 217 aa15.45■□□□□ 0.06
LINC00662-206ENST00000590523 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
LINC00662-206ENST00000590523 HSP90AB4PQ58FF6 505 aa15.44■□□□□ 0.06
LINC00662-206ENST00000590523 POLA2Q14181 598 aa15.44■□□□□ 0.06
LINC00662-206ENST00000590523 IL17REQ8NFR9 667 aa15.44■□□□□ 0.06
LINC00662-206ENST00000590523 PHF14O94880 888 aa15.43■□□□□ 0.06
LINC00662-206ENST00000590523 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
LINC00662-206ENST00000590523 RBSNQ9H1K0 784 aa15.43■□□□□ 0.06
LINC00662-206ENST00000590523 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
LINC00662-206ENST00000590523 PRIM1P49642 420 aaKnown RBP15.42■□□□□ 0.06
LINC00662-206ENST00000590523 HSPA4P34932 840 aa15.42■□□□□ 0.06
LINC00662-206ENST00000590523 TSHZ3Q63HK5 1081 aa15.42■□□□□ 0.06
LINC00662-206ENST00000590523 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
LINC00662-206ENST00000590523 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
LINC00662-206ENST00000590523 PALD1Q9ULE6 856 aa15.42■□□□□ 0.06
LINC00662-206ENST00000590523 CEMIPQ8WUJ3 1361 aa15.41■□□□□ 0.06
LINC00662-206ENST00000590523 PODXL2Q9NZ53 605 aa15.41■□□□□ 0.06
LINC00662-206ENST00000590523 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
LINC00662-206ENST00000590523 PLEKHG5O94827 1062 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 ANKLE2Q86XL3 938 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 TMEM63CQ9P1W3 806 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 ZKSCAN5Q9Y2L8 839 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 RAD50Q92878 1312 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 KDM3BQ7LBC6 1761 aa15.4■□□□□ 0.06
LINC00662-206ENST00000590523 ADGRL3Q9HAR2 1447 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
LINC00662-206ENST00000590523 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 RHPN1Q8TCX5 695 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
LINC00662-206ENST00000590523 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
LINC00662-206ENST00000590523 USP42Q9H9J4 1324 aaKnown RBP15.39■□□□□ 0.05
LINC00662-206ENST00000590523 SETD1BQ9UPS6 1966 aaKnown RBP15.39■□□□□ 0.05
LINC00662-206ENST00000590523 LTN1O94822 1766 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 UQCRHLA0A096LP55 91 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 UQCRHP07919 91 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 UTP14CQ5TAP6 766 aaKnown RBP15.39■□□□□ 0.05
LINC00662-206ENST00000590523 ABTB2Q8N961 1025 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
LINC00662-206ENST00000590523 CRYBG1Q9Y4K1 1723 aa15.38■□□□□ 0.05
LINC00662-206ENST00000590523 SYCE3A1L190 88 aa15.38■□□□□ 0.05
LINC00662-206ENST00000590523 SGSM2O43147 1006 aa15.38■□□□□ 0.05
LINC00662-206ENST00000590523 SASS6Q6UVJ0 657 aa15.38■□□□□ 0.05
LINC00662-206ENST00000590523 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
LINC00662-206ENST00000590523 UNC5CLQ8IV45 518 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 TMEM87AQ8NBN3 555 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 PI4K2BQ8TCG2 481 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 TSPY26PQ9H489 355 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 FAM13BQ9NYF5 915 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 DNAAF4Q8WXU2 420 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 IP6K1Q92551 441 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 IL1RAPL2Q9NP60 686 aa15.37■□□□□ 0.05
LINC00662-206ENST00000590523 LMO7Q8WWI1 1683 aa15.36■□□□□ 0.05
LINC00662-206ENST00000590523 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
LINC00662-206ENST00000590523 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
LINC00662-206ENST00000590523 RUFY2Q8WXA3 655 aa15.36■□□□□ 0.05
LINC00662-206ENST00000590523 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.36■□□□□ 0.05
LINC00662-206ENST00000590523 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
LINC00662-206ENST00000590523 GLRX3O76003 335 aaKnown RBP15.36■□□□□ 0.05
LINC00662-206ENST00000590523 LETM1O95202 739 aaPredicted RBP15.36■□□□□ 0.05
LINC00662-206ENST00000590523 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
LINC00662-206ENST00000590523 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
LINC00662-206ENST00000590523 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
LINC00662-206ENST00000590523 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
LINC00662-206ENST00000590523 OVOS2A0A0G2JMS6 1433 aa15.35■□□□□ 0.05
LINC00662-206ENST00000590523 RBM10P98175 930 aaKnown RBP15.35■□□□□ 0.05
LINC00662-206ENST00000590523 MTX1Q13505 466 aa15.35■□□□□ 0.05
LINC00662-206ENST00000590523 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
LINC00662-206ENST00000590523 UPF3BQ9BZI7 483 aaKnown RBP15.35■□□□□ 0.05
LINC00662-206ENST00000590523 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.35■□□□□ 0.05
LINC00662-206ENST00000590523 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 FOXD4L5Q5VV16 416 aaPredicted RBP15.34■□□□□ 0.05
LINC00662-206ENST00000590523 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 FOXD4L4Q8WXT5 416 aaPredicted RBP15.34■□□□□ 0.05
LINC00662-206ENST00000590523 GPATCH3Q96I76 525 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
LINC00662-206ENST00000590523 LIMCH1Q9UPQ0 1083 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 PDIA4P13667 645 aaKnown RBP15.34■□□□□ 0.05
LINC00662-206ENST00000590523 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
LINC00662-206ENST00000590523 TTC14Q96N46 770 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 NSFL1CQ9UNZ2 370 aaKnown RBP15.34■□□□□ 0.05
LINC00662-206ENST00000590523 SNX14Q9Y5W7 946 aa15.34■□□□□ 0.05
LINC00662-206ENST00000590523 NFAT5O94916 1531 aa15.33■□□□□ 0.05
LINC00662-206ENST00000590523 ALDH1L1O75891 902 aa15.33■□□□□ 0.04
LINC00662-206ENST00000590523 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
LINC00662-206ENST00000590523 NOL8Q76FK4 1167 aaKnown RBP15.32■□□□□ 0.04
LINC00662-206ENST00000590523 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms