RNA–Protein interactions for RNA: ENST00000590249.5

GHDC-210, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-210ENST00000590249 SCN7AQ01118 1682 aa20.93■□□□□ 0.94
GHDC-210ENST00000590249 AFDNP55196 1824 aaKnown RBP20.93■□□□□ 0.94
GHDC-210ENST00000590249 KCNQ3O43525 872 aa20.93■□□□□ 0.94
GHDC-210ENST00000590249 PARP3Q9Y6F1 533 aa20.93■□□□□ 0.94
GHDC-210ENST00000590249 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
GHDC-210ENST00000590249 MCM10Q7L590 875 aa20.92■□□□□ 0.94
GHDC-210ENST00000590249 CANXP27824 592 aaKnown RBP20.91■□□□□ 0.94
GHDC-210ENST00000590249 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
GHDC-210ENST00000590249 NRXN2Q9P2S2 1712 aa20.91■□□□□ 0.94
GHDC-210ENST00000590249 A0A0G2JLW4 131 aa20.9■□□□□ 0.94
GHDC-210ENST00000590249 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
GHDC-210ENST00000590249 POLRMTO00411 1230 aaKnown RBP20.89■□□□□ 0.93
GHDC-210ENST00000590249 ZPR1O75312 459 aa20.89■□□□□ 0.93
GHDC-210ENST00000590249 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
GHDC-210ENST00000590249 BCL2L12Q9HB09 334 aa20.89■□□□□ 0.93
GHDC-210ENST00000590249 NARFQ9UHQ1 456 aa20.89■□□□□ 0.93
GHDC-210ENST00000590249 STARD3NLO95772 234 aa20.88■□□□□ 0.93
GHDC-210ENST00000590249 DPEP1P16444 411 aa20.88■□□□□ 0.93
GHDC-210ENST00000590249 TGFB2P61812 414 aa20.88■□□□□ 0.93
GHDC-210ENST00000590249 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
GHDC-210ENST00000590249 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
GHDC-210ENST00000590249 BCORQ6W2J9 1755 aa20.87■□□□□ 0.93
GHDC-210ENST00000590249 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
GHDC-210ENST00000590249 ADCY9O60503 1353 aa20.87■□□□□ 0.93
GHDC-210ENST00000590249 TM4SF1P30408 202 aa20.87■□□□□ 0.93
GHDC-210ENST00000590249 EIF5P55010 431 aaKnown RBP20.87■□□□□ 0.93
GHDC-210ENST00000590249 PLEKHF1Q96S99 279 aa20.87■□□□□ 0.93
GHDC-210ENST00000590249 ARFGEF1Q9Y6D6 1849 aa20.87■□□□□ 0.93
GHDC-210ENST00000590249 NFIXQ14938 502 aa20.86■□□□□ 0.93
GHDC-210ENST00000590249 ATP10DQ9P241 1426 aa20.86■□□□□ 0.93
GHDC-210ENST00000590249 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
GHDC-210ENST00000590249 PRAMEF22A3QJZ6 481 aa20.85■□□□□ 0.93
GHDC-210ENST00000590249 HTATSF1O43719 755 aaKnown RBP20.84■□□□□ 0.93
GHDC-210ENST00000590249 A1BGP04217 495 aa20.84■□□□□ 0.93
GHDC-210ENST00000590249 KCNA3P22001 575 aa20.84■□□□□ 0.93
GHDC-210ENST00000590249 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
GHDC-210ENST00000590249 BCS1LQ9Y276 419 aa20.84■□□□□ 0.93
GHDC-210ENST00000590249 ZNF330Q9Y3S2 320 aaPredicted RBP20.84■□□□□ 0.93
GHDC-210ENST00000590249 DLEC1Q9Y238 1755 aa20.84■□□□□ 0.93
GHDC-210ENST00000590249 RALBP1Q15311 655 aa20.83■□□□□ 0.93
GHDC-210ENST00000590249 PIP4K2AP48426 406 aaPredicted RBP20.82■□□□□ 0.92
GHDC-210ENST00000590249 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
GHDC-210ENST00000590249 CARMIL3Q8ND23 1372 aa20.82■□□□□ 0.92
GHDC-210ENST00000590249 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
GHDC-210ENST00000590249 CHRNA5P30532 468 aa20.81■□□□□ 0.92
GHDC-210ENST00000590249 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
GHDC-210ENST00000590249 THUMPD2Q9BTF0 503 aaKnown RBP20.81■□□□□ 0.92
GHDC-210ENST00000590249 A0A087WZG4 1122 aa20.8■□□□□ 0.92
GHDC-210ENST00000590249 NEFMP07197 916 aa20.8■□□□□ 0.92
GHDC-210ENST00000590249 NFE2L2Q16236 605 aa20.8■□□□□ 0.92
GHDC-210ENST00000590249 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
GHDC-210ENST00000590249 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
GHDC-210ENST00000590249 TBC1D2BQ9UPU7 963 aa20.8■□□□□ 0.92
GHDC-210ENST00000590249 SERPINB2P05120 415 aa20.79■□□□□ 0.92
GHDC-210ENST00000590249 TBC1D9BQ66K14 1250 aa20.79■□□□□ 0.92
GHDC-210ENST00000590249 MYBBP1AQ9BQG0 1328 aaKnown RBP20.78■□□□□ 0.92
GHDC-210ENST00000590249 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
GHDC-210ENST00000590249 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
GHDC-210ENST00000590249 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
GHDC-210ENST00000590249 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
GHDC-210ENST00000590249 CAMTA2O94983 1202 aa20.77■□□□□ 0.92
GHDC-210ENST00000590249 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
GHDC-210ENST00000590249 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
GHDC-210ENST00000590249 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
GHDC-210ENST00000590249 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
GHDC-210ENST00000590249 DZIP3Q86Y13 1208 aaKnown RBP20.75■□□□□ 0.91
GHDC-210ENST00000590249 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
GHDC-210ENST00000590249 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
GHDC-210ENST00000590249 C1QTNF8P60827 252 aa20.74■□□□□ 0.91
GHDC-210ENST00000590249 DALRD3Q5D0E6 543 aaKnown RBP20.74■□□□□ 0.91
GHDC-210ENST00000590249 ARHGAP27Q6ZUM4 889 aa20.74■□□□□ 0.91
GHDC-210ENST00000590249 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
GHDC-210ENST00000590249 CCDC24Q8N4L8 307 aa20.72■□□□□ 0.91
GHDC-210ENST00000590249 SBF1O95248 1867 aa20.72■□□□□ 0.91
GHDC-210ENST00000590249 PRR5LQ6MZQ0 368 aa20.71■□□□□ 0.91
GHDC-210ENST00000590249 NPM2Q86SE8 214 aaKnown RBP20.71■□□□□ 0.91
GHDC-210ENST00000590249 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
GHDC-210ENST00000590249 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
GHDC-210ENST00000590249 EIF4A1P60842 406 aaKnown RBP20.7■□□□□ 0.9
GHDC-210ENST00000590249 CCDC146Q8IYE0 955 aa20.7■□□□□ 0.9
GHDC-210ENST00000590249 GPBP1L1Q9HC44 474 aaPredicted RBP20.7■□□□□ 0.9
GHDC-210ENST00000590249 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
GHDC-210ENST00000590249 RIPK4P57078 832 aa20.69■□□□□ 0.9
GHDC-210ENST00000590249 C2CD5Q86YS7 1000 aa20.69■□□□□ 0.9
GHDC-210ENST00000590249 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
GHDC-210ENST00000590249 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
GHDC-210ENST00000590249 SETDB2Q96T68 719 aa20.67■□□□□ 0.9
GHDC-210ENST00000590249 C9orf131Q5VYM1 1079 aa20.66■□□□□ 0.9
GHDC-210ENST00000590249 CNBD1Q8NA66 436 aa20.66■□□□□ 0.9
GHDC-210ENST00000590249 ARFGEF2Q9Y6D5 1785 aa20.66■□□□□ 0.9
GHDC-210ENST00000590249 NUP98P52948 1817 aa20.66■□□□□ 0.9
GHDC-210ENST00000590249 H0YIN7 160 aa20.65■□□□□ 0.9
GHDC-210ENST00000590249 RASSF7Q02833 373 aa20.65■□□□□ 0.9
GHDC-210ENST00000590249 BRIP1Q9BX63 1249 aa20.65■□□□□ 0.9
GHDC-210ENST00000590249 TSPYL4Q9UJ04 414 aa20.65■□□□□ 0.9
GHDC-210ENST00000590249 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.9
GHDC-210ENST00000590249 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
GHDC-210ENST00000590249 CLEC4GQ6UXB4 293 aa20.64■□□□□ 0.89
GHDC-210ENST00000590249 TTLL6Q8N841 843 aa20.64■□□□□ 0.89
GHDC-210ENST00000590249 ZNF652Q9Y2D9 606 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms