RNA–Protein interactions for RNA: ENST00000590187.2

NCAN-204, Transcript of neurocan, humanhuman

TSL 1 (best)

Gene NCAN, Length 2,361 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-204ENST00000590187 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
NCAN-204ENST00000590187 PDE4CQ08493 712 aa20.16■□□□□ 0.82
NCAN-204ENST00000590187 SLC4A9Q96Q91 983 aa20.15■□□□□ 0.82
NCAN-204ENST00000590187 THUMPD2Q9BTF0 503 aaKnown RBP20.15■□□□□ 0.82
NCAN-204ENST00000590187 PDGFDQ9GZP0 370 aaPredicted RBP20.15■□□□□ 0.82
NCAN-204ENST00000590187 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
NCAN-204ENST00000590187 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
NCAN-204ENST00000590187 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.82
NCAN-204ENST00000590187 CASZ1Q86V15 1759 aa20.14■□□□□ 0.81
NCAN-204ENST00000590187 QSER1Q2KHR3 1735 aa20.14■□□□□ 0.81
NCAN-204ENST00000590187 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
NCAN-204ENST00000590187 PDE4AP27815 886 aa20.13■□□□□ 0.81
NCAN-204ENST00000590187 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
NCAN-204ENST00000590187 TJP1Q07157 1748 aa20.13■□□□□ 0.81
NCAN-204ENST00000590187 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
NCAN-204ENST00000590187 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
NCAN-204ENST00000590187 PHF14O94880 888 aa20.13■□□□□ 0.81
NCAN-204ENST00000590187 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
NCAN-204ENST00000590187 COL5A3P25940 1745 aaPredicted RBP20.13■□□□□ 0.81
NCAN-204ENST00000590187 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
NCAN-204ENST00000590187 GNPATO15228 680 aa20.12■□□□□ 0.81
NCAN-204ENST00000590187 ZBTB7AO95365 584 aa20.12■□□□□ 0.81
NCAN-204ENST00000590187 TAF7Q15545 349 aaPredicted RBP20.12■□□□□ 0.81
NCAN-204ENST00000590187 BACH2Q9BYV9 841 aa20.12■□□□□ 0.81
NCAN-204ENST00000590187 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
NCAN-204ENST00000590187 APAF1O14727 1248 aa20.1■□□□□ 0.81
NCAN-204ENST00000590187 DNAJC10Q8IXB1 793 aa20.1■□□□□ 0.81
NCAN-204ENST00000590187 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
NCAN-204ENST00000590187 KCNQ3O43525 872 aa20.1■□□□□ 0.81
NCAN-204ENST00000590187 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
NCAN-204ENST00000590187 NAP1L5Q96NT1 182 aaPredicted RBP20.09■□□□□ 0.81
NCAN-204ENST00000590187 FMNL2Q96PY5 1086 aa20.09■□□□□ 0.81
NCAN-204ENST00000590187 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
NCAN-204ENST00000590187 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
NCAN-204ENST00000590187 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
NCAN-204ENST00000590187 SPON1Q9HCB6 807 aa20.08■□□□□ 0.81
NCAN-204ENST00000590187 ATF5Q9Y2D1 282 aaPredicted RBP20.08■□□□□ 0.81
NCAN-204ENST00000590187 CICQ96RK0 1608 aaPredicted RBP20.08■□□□□ 0.8
NCAN-204ENST00000590187 COL23A1Q86Y22 540 aaPredicted RBP20.08■□□□□ 0.8
NCAN-204ENST00000590187 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
NCAN-204ENST00000590187 FLAD1Q8NFF5 587 aa20.07■□□□□ 0.8
NCAN-204ENST00000590187 HEG1Q9ULI3 1381 aa20.07■□□□□ 0.8
NCAN-204ENST00000590187 LRP5O75197 1615 aa20.07■□□□□ 0.8
NCAN-204ENST00000590187 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
NCAN-204ENST00000590187 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
NCAN-204ENST00000590187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.06■□□□□ 0.8
NCAN-204ENST00000590187 RC3H1Q5TC82 1133 aaKnown RBP20.06■□□□□ 0.8
NCAN-204ENST00000590187 MTFR1LQ9H019 292 aa20.06■□□□□ 0.8
NCAN-204ENST00000590187 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
NCAN-204ENST00000590187 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
NCAN-204ENST00000590187 SSFA2P28290 1259 aa20.05■□□□□ 0.8
NCAN-204ENST00000590187 AMIGO3Q86WK7 504 aa20.05■□□□□ 0.8
NCAN-204ENST00000590187 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
NCAN-204ENST00000590187 MS4A1P11836 297 aa20.04■□□□□ 0.8
NCAN-204ENST00000590187 CCDC87Q9NVE4 849 aa20.04■□□□□ 0.8
NCAN-204ENST00000590187 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
NCAN-204ENST00000590187 STARD3NLO95772 234 aa20.03■□□□□ 0.8
NCAN-204ENST00000590187 CYP19A1P11511 503 aaPredicted RBP20.03■□□□□ 0.8
NCAN-204ENST00000590187 PPP1R1BQ9UD71 204 aaPredicted RBP20.03■□□□□ 0.8
NCAN-204ENST00000590187 PRDM4Q9UKN5 801 aa20.03■□□□□ 0.8
NCAN-204ENST00000590187 SLC16A10Q8TF71 515 aa20.03■□□□□ 0.8
NCAN-204ENST00000590187 TEX13AQ9BXU3 409 aaPredicted RBP20.03■□□□□ 0.8
NCAN-204ENST00000590187 TRAPPC3LQ5T215 181 aa20.02■□□□□ 0.8
NCAN-204ENST00000590187 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
NCAN-204ENST00000590187 RPS6KA4O75676 772 aa20.02■□□□□ 0.8
NCAN-204ENST00000590187 INTS5Q6P9B9 1019 aaKnown RBP20.01■□□□□ 0.79
NCAN-204ENST00000590187 SNRPA1P09661 255 aaKnown RBP20.01■□□□□ 0.79
NCAN-204ENST00000590187 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
NCAN-204ENST00000590187 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
NCAN-204ENST00000590187 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
NCAN-204ENST00000590187 RFC4P35249 363 aa20■□□□□ 0.79
NCAN-204ENST00000590187 CLCN1P35523 988 aa20■□□□□ 0.79
NCAN-204ENST00000590187 ZBTB1Q9Y2K1 713 aa20■□□□□ 0.79
NCAN-204ENST00000590187 ZNF330Q9Y3S2 320 aaPredicted RBP20■□□□□ 0.79
NCAN-204ENST00000590187 ADRA2BP18089 450 aa19.99■□□□□ 0.79
NCAN-204ENST00000590187 POLD1P28340 1107 aa19.99■□□□□ 0.79
NCAN-204ENST00000590187 ARHGEF1Q92888 912 aaKnown RBP19.99■□□□□ 0.79
NCAN-204ENST00000590187 C4AP0C0L4 1744 aa19.98■□□□□ 0.79
NCAN-204ENST00000590187 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
NCAN-204ENST00000590187 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
NCAN-204ENST00000590187 LAMB4A4D0S4 1761 aa19.97■□□□□ 0.79
NCAN-204ENST00000590187 PDIA4P13667 645 aaKnown RBP19.97■□□□□ 0.79
NCAN-204ENST00000590187 BABAM1Q9NWV8 329 aa19.97■□□□□ 0.79
NCAN-204ENST00000590187 FRAT2O75474 233 aaPredicted RBP19.97■□□□□ 0.79
NCAN-204ENST00000590187 A1BGP04217 495 aa19.97■□□□□ 0.79
NCAN-204ENST00000590187 PTGER2P43116 358 aa19.97■□□□□ 0.79
NCAN-204ENST00000590187 SOS1Q07889 1333 aaPredicted RBP19.96■□□□□ 0.79
NCAN-204ENST00000590187 COL15A1P39059 1388 aa19.96■□□□□ 0.79
NCAN-204ENST00000590187 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
NCAN-204ENST00000590187 ARXQ96QS3 562 aa19.95■□□□□ 0.78
NCAN-204ENST00000590187 CHL1O00533 1208 aa19.94■□□□□ 0.78
NCAN-204ENST00000590187 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
NCAN-204ENST00000590187 GIGYF1O75420 1035 aaPredicted RBP19.94■□□□□ 0.78
NCAN-204ENST00000590187 CFAP44Q96MT7 982 aa19.94■□□□□ 0.78
NCAN-204ENST00000590187 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
NCAN-204ENST00000590187 ZPR1O75312 459 aa19.93■□□□□ 0.78
NCAN-204ENST00000590187 GNAI1P63096 354 aa19.93■□□□□ 0.78
NCAN-204ENST00000590187 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
NCAN-204ENST00000590187 CCDC27Q2M243 656 aa19.92■□□□□ 0.78
NCAN-204ENST00000590187 SGIP1Q9BQI5 828 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms