RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 SLC52A2Q9HAB3 445 aa11.12□□□□□ -0.63
TPM4-211ENST00000589897 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
TPM4-211ENST00000589897 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
TPM4-211ENST00000589897 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
TPM4-211ENST00000589897 GAS2L2Q8NHY3 880 aa11.11□□□□□ -0.63
TPM4-211ENST00000589897 LGR6Q9HBX8 967 aa11.11□□□□□ -0.63
TPM4-211ENST00000589897 VIRMAQ69YN4 1812 aaKnown RBP11.1□□□□□ -0.63
TPM4-211ENST00000589897 GNAT3A8MTJ3 354 aa11.1□□□□□ -0.63
TPM4-211ENST00000589897 FOXN1O15353 648 aa11.1□□□□□ -0.63
TPM4-211ENST00000589897 RPS6KA4O75676 772 aa11.1□□□□□ -0.63
TPM4-211ENST00000589897 U2AF1L5P0DN76 240 aaPredicted RBP11.1□□□□□ -0.63
TPM4-211ENST00000589897 U2AF1Q01081 240 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM4-211ENST00000589897 TEFQ10587 303 aa11.1□□□□□ -0.63
TPM4-211ENST00000589897 TTC5Q8N0Z6 440 aa11.1□□□□□ -0.63
TPM4-211ENST00000589897 ZNF831Q5JPB2 1677 aa11.1□□□□□ -0.63
TPM4-211ENST00000589897 CNTNAP4Q9C0A0 1308 aa11.09□□□□□ -0.63
TPM4-211ENST00000589897 NEFMP07197 916 aa11.09□□□□□ -0.63
TPM4-211ENST00000589897 LMNB1P20700 586 aa11.09□□□□□ -0.63
TPM4-211ENST00000589897 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
TPM4-211ENST00000589897 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
TPM4-211ENST00000589897 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
TPM4-211ENST00000589897 SLC4A9Q96Q91 983 aa11.09□□□□□ -0.63
TPM4-211ENST00000589897 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
TPM4-211ENST00000589897 PRKAR2BP31323 418 aa11.08□□□□□ -0.64
TPM4-211ENST00000589897 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
TPM4-211ENST00000589897 ABHD8Q96I13 439 aa11.08□□□□□ -0.64
TPM4-211ENST00000589897 COL5A3P25940 1745 aaPredicted RBP11.08□□□□□ -0.64
TPM4-211ENST00000589897 COL3A1P02461 1466 aaPredicted RBP11.07□□□□□ -0.64
TPM4-211ENST00000589897 GYS1P13807 737 aa11.07□□□□□ -0.64
TPM4-211ENST00000589897 RTF1Q92541 710 aaKnown RBP11.07□□□□□ -0.64
TPM4-211ENST00000589897 ZPR1O75312 459 aa11.06□□□□□ -0.64
TPM4-211ENST00000589897 RGS19P49795 217 aa11.06□□□□□ -0.64
TPM4-211ENST00000589897 DNAJC10Q8IXB1 793 aa11.06□□□□□ -0.64
TPM4-211ENST00000589897 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
TPM4-211ENST00000589897 STARD3NLO95772 234 aa11.05□□□□□ -0.64
TPM4-211ENST00000589897 LBX1P52954 281 aa11.05□□□□□ -0.64
TPM4-211ENST00000589897 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
TPM4-211ENST00000589897 NPM2Q86SE8 214 aaKnown RBP11.05□□□□□ -0.64
TPM4-211ENST00000589897 MAP2K1Q02750 393 aaPredicted RBP11.04□□□□□ -0.64
TPM4-211ENST00000589897 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
TPM4-211ENST00000589897 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
TPM4-211ENST00000589897 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
TPM4-211ENST00000589897 WBP1LQ9NX94 342 aa11.04□□□□□ -0.64
TPM4-211ENST00000589897 MRC1P22897 1456 aa11.04□□□□□ -0.64
TPM4-211ENST00000589897 TJP1Q07157 1748 aa11.04□□□□□ -0.64
TPM4-211ENST00000589897 CCDC85CA6NKD9 419 aa11.03□□□□□ -0.64
TPM4-211ENST00000589897 BTBD11A6QL63 1104 aa11.03□□□□□ -0.64
TPM4-211ENST00000589897 CYP19A1P11511 503 aaPredicted RBP11.03□□□□□ -0.64
TPM4-211ENST00000589897 INTS5Q6P9B9 1019 aaKnown RBP11.03□□□□□ -0.64
TPM4-211ENST00000589897 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
TPM4-211ENST00000589897 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
TPM4-211ENST00000589897 TEX13AQ9BXU3 409 aaPredicted RBP11.03□□□□□ -0.64
TPM4-211ENST00000589897 PNNQ9H307 717 aaKnown RBP11.03□□□□□ -0.64
TPM4-211ENST00000589897 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
TPM4-211ENST00000589897 PCNTO95613 3336 aa11.03□□□□□ -0.64
TPM4-211ENST00000589897 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
TPM4-211ENST00000589897 C4AP0C0L4 1744 aa11.02□□□□□ -0.65
TPM4-211ENST00000589897 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.65
TPM4-211ENST00000589897 CHRNA5P30532 468 aa11.02□□□□□ -0.65
TPM4-211ENST00000589897 FMNL2Q96PY5 1086 aa11.02□□□□□ -0.65
TPM4-211ENST00000589897 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
TPM4-211ENST00000589897 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
TPM4-211ENST00000589897 ADAMTS7Q9UKP4 1686 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 A0A087WZG4 1122 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 TMEM88BA6NKF7 163 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 POTECB2RU33 542 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 VEGFBP49765 207 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 RASSF7Q02833 373 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
TPM4-211ENST00000589897 FKBP8Q14318 412 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 USPL1Q5W0Q7 1092 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 TTLL6Q8N841 843 aa11.01□□□□□ -0.65
TPM4-211ENST00000589897 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
TPM4-211ENST00000589897 RALBP1Q15311 655 aa11□□□□□ -0.65
TPM4-211ENST00000589897 MCM10Q7L590 875 aa11□□□□□ -0.65
TPM4-211ENST00000589897 ZNF496Q96IT1 587 aaPredicted RBP11□□□□□ -0.65
TPM4-211ENST00000589897 ZBTB1Q9Y2K1 713 aa11□□□□□ -0.65
TPM4-211ENST00000589897 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
TPM4-211ENST00000589897 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
TPM4-211ENST00000589897 COL15A1P39059 1388 aa11□□□□□ -0.65
TPM4-211ENST00000589897 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
TPM4-211ENST00000589897 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
TPM4-211ENST00000589897 IQCA1LA6NCM1 817 aa10.99□□□□□ -0.65
TPM4-211ENST00000589897 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
TPM4-211ENST00000589897 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
TPM4-211ENST00000589897 NARFQ9UHQ1 456 aa10.99□□□□□ -0.65
TPM4-211ENST00000589897 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
TPM4-211ENST00000589897 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
TPM4-211ENST00000589897 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
TPM4-211ENST00000589897 NPHP1O15259 732 aa10.98□□□□□ -0.65
TPM4-211ENST00000589897 HSPA8P11142 646 aaKnown RBP10.98□□□□□ -0.65
TPM4-211ENST00000589897 TM4SF1P30408 202 aa10.98□□□□□ -0.65
TPM4-211ENST00000589897 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
TPM4-211ENST00000589897 DEFB115Q30KQ5 88 aa10.98□□□□□ -0.65
TPM4-211ENST00000589897 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
TPM4-211ENST00000589897 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
TPM4-211ENST00000589897 H0YIN7 160 aa10.97□□□□□ -0.65
TPM4-211ENST00000589897 POLRMTO00411 1230 aaKnown RBP10.97□□□□□ -0.65
TPM4-211ENST00000589897 DDR1Q08345 913 aa10.97□□□□□ -0.65
TPM4-211ENST00000589897 TAF7Q15545 349 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms