RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 CHRNA5P30532 468 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 LBX1P52954 281 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 RASSF7Q02833 373 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
TREM1-204ENST00000589614 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
TREM1-204ENST00000589614 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
TREM1-204ENST00000589614 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
TREM1-204ENST00000589614 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
TREM1-204ENST00000589614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.27
TREM1-204ENST00000589614 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
TREM1-204ENST00000589614 FLT4P35916 1363 aa13.37□□□□□ -0.27
TREM1-204ENST00000589614 VEGFBP49765 207 aa13.37□□□□□ -0.27
TREM1-204ENST00000589614 DDR1Q08345 913 aa13.37□□□□□ -0.27
TREM1-204ENST00000589614 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
TREM1-204ENST00000589614 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
TREM1-204ENST00000589614 PASKQ96RG2 1323 aa13.37□□□□□ -0.27
TREM1-204ENST00000589614 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
TREM1-204ENST00000589614 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
TREM1-204ENST00000589614 SCN4AP35499 1836 aa13.35□□□□□ -0.27
TREM1-204ENST00000589614 NRXN2Q9P2S2 1712 aa13.35□□□□□ -0.27
TREM1-204ENST00000589614 USP42Q9H9J4 1324 aaKnown RBP13.35□□□□□ -0.27
TREM1-204ENST00000589614 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
TREM1-204ENST00000589614 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
TREM1-204ENST00000589614 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
TREM1-204ENST00000589614 NFKBIEO00221 500 aa13.34□□□□□ -0.27
TREM1-204ENST00000589614 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
TREM1-204ENST00000589614 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
TREM1-204ENST00000589614 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
TREM1-204ENST00000589614 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
TREM1-204ENST00000589614 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
TREM1-204ENST00000589614 PHKG2P15735 406 aa13.33□□□□□ -0.28
TREM1-204ENST00000589614 TM4SF1P30408 202 aa13.33□□□□□ -0.28
TREM1-204ENST00000589614 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
TREM1-204ENST00000589614 ADAMTS7Q9UKP4 1686 aa13.33□□□□□ -0.28
TREM1-204ENST00000589614 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
TREM1-204ENST00000589614 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
TREM1-204ENST00000589614 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
TREM1-204ENST00000589614 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
TREM1-204ENST00000589614 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
TREM1-204ENST00000589614 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
TREM1-204ENST00000589614 ERVV-2B6SEH9 535 aa13.31□□□□□ -0.28
TREM1-204ENST00000589614 FYB1O15117 783 aa13.31□□□□□ -0.28
TREM1-204ENST00000589614 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
TREM1-204ENST00000589614 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
TREM1-204ENST00000589614 KIF20BQ96Q89 1820 aa13.3□□□□□ -0.28
TREM1-204ENST00000589614 ITGBL1O95965 494 aaPredicted RBP13.3□□□□□ -0.28
TREM1-204ENST00000589614 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
TREM1-204ENST00000589614 BBXQ8WY36 941 aaPredicted RBP13.3□□□□□ -0.28
TREM1-204ENST00000589614 THSD7BQ9C0I4 1608 aa13.3□□□□□ -0.28
TREM1-204ENST00000589614 ANKRD26Q9UPS8 1709 aa13.3□□□□□ -0.28
TREM1-204ENST00000589614 IQCA1LA6NCM1 817 aa13.29□□□□□ -0.28
TREM1-204ENST00000589614 DEFB115Q30KQ5 88 aa13.29□□□□□ -0.28
TREM1-204ENST00000589614 GGNBP2Q9H3C7 697 aa13.29□□□□□ -0.28
TREM1-204ENST00000589614 TJP1Q07157 1748 aa13.28□□□□□ -0.28
TREM1-204ENST00000589614 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
TREM1-204ENST00000589614 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
TREM1-204ENST00000589614 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
TREM1-204ENST00000589614 WDR33Q9C0J8 1336 aaKnown RBP13.27□□□□□ -0.29
TREM1-204ENST00000589614 LTBP3Q9NS15 1303 aa13.27□□□□□ -0.29
TREM1-204ENST00000589614 ADAMTSL1Q8N6G6 1762 aa13.27□□□□□ -0.29
TREM1-204ENST00000589614 H0YIN7 160 aa13.26□□□□□ -0.29
TREM1-204ENST00000589614 RGL2O15211 777 aa13.26□□□□□ -0.29
TREM1-204ENST00000589614 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
TREM1-204ENST00000589614 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
TREM1-204ENST00000589614 ZPR1O75312 459 aa13.25□□□□□ -0.29
TREM1-204ENST00000589614 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
TREM1-204ENST00000589614 C2CD5Q86YS7 1000 aa13.25□□□□□ -0.29
TREM1-204ENST00000589614 EYA1Q99502 592 aa13.25□□□□□ -0.29
TREM1-204ENST00000589614 TAF1DQ9H5J8 278 aaPredicted RBP13.25□□□□□ -0.29
TREM1-204ENST00000589614 NFIXQ14938 502 aa13.24□□□□□ -0.29
TREM1-204ENST00000589614 USPL1Q5W0Q7 1092 aa13.24□□□□□ -0.29
TREM1-204ENST00000589614 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
TREM1-204ENST00000589614 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
TREM1-204ENST00000589614 ANKRD31Q8N7Z5 1873 aa13.24□□□□□ -0.29
TREM1-204ENST00000589614 CASP8AP2Q9UKL3 1982 aa13.23□□□□□ -0.29
TREM1-204ENST00000589614 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
TREM1-204ENST00000589614 SERPINB2P05120 415 aa13.23□□□□□ -0.29
TREM1-204ENST00000589614 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
TREM1-204ENST00000589614 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
TREM1-204ENST00000589614 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
TREM1-204ENST00000589614 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
TREM1-204ENST00000589614 MIER1Q8N108 512 aa13.22□□□□□ -0.29
TREM1-204ENST00000589614 TESK2Q96S53 571 aa13.22□□□□□ -0.29
TREM1-204ENST00000589614 NARFQ9UHQ1 456 aa13.22□□□□□ -0.29
TREM1-204ENST00000589614 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
TREM1-204ENST00000589614 C21orf2O43822 256 aa13.21□□□□□ -0.29
TREM1-204ENST00000589614 CABP4P57796 275 aa13.21□□□□□ -0.29
TREM1-204ENST00000589614 CFAP44Q96MT7 982 aa13.21□□□□□ -0.29
TREM1-204ENST00000589614 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
TREM1-204ENST00000589614 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.3
TREM1-204ENST00000589614 LTBP1Q14766 1721 aa13.21□□□□□ -0.3
TREM1-204ENST00000589614 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
TREM1-204ENST00000589614 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
TREM1-204ENST00000589614 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
TREM1-204ENST00000589614 ECE1P42892 770 aa13.2□□□□□ -0.3
TREM1-204ENST00000589614 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
TREM1-204ENST00000589614 MCOLN1Q9GZU1 580 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms