RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
CLPTM1-211ENST00000589347 LGR6Q9HBX8 967 aa14.1□□□□□ -0.15
CLPTM1-211ENST00000589347 SCN7AQ01118 1682 aa14.1□□□□□ -0.15
CLPTM1-211ENST00000589347 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 SLC34A2O95436 690 aa14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 RFC4P35249 363 aa14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 CRKLP46109 303 aaKnown RBP14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 RTF1Q92541 710 aaKnown RBP14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 TNRC6CQ9HCJ0 1690 aaKnown RBP14.09□□□□□ -0.15
CLPTM1-211ENST00000589347 AFDNP55196 1824 aaKnown RBP14.08□□□□□ -0.15
CLPTM1-211ENST00000589347 RPS6KA4O75676 772 aa14.08□□□□□ -0.16
CLPTM1-211ENST00000589347 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
CLPTM1-211ENST00000589347 BCORQ6W2J9 1755 aa14.08□□□□□ -0.16
CLPTM1-211ENST00000589347 ARFGEF1Q9Y6D6 1849 aa14.08□□□□□ -0.16
CLPTM1-211ENST00000589347 CEMIPQ8WUJ3 1361 aa14.08□□□□□ -0.16
CLPTM1-211ENST00000589347 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
CLPTM1-211ENST00000589347 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
CLPTM1-211ENST00000589347 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
CLPTM1-211ENST00000589347 NLGN1Q8N2Q7 840 aa14.06□□□□□ -0.16
CLPTM1-211ENST00000589347 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
CLPTM1-211ENST00000589347 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
CLPTM1-211ENST00000589347 COL15A1P39059 1388 aa14.06□□□□□ -0.16
CLPTM1-211ENST00000589347 TGFB2P61812 414 aa14.05□□□□□ -0.16
CLPTM1-211ENST00000589347 SMIM5Q71RC9 77 aa14.05□□□□□ -0.16
CLPTM1-211ENST00000589347 DNAJC10Q8IXB1 793 aa14.05□□□□□ -0.16
CLPTM1-211ENST00000589347 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
CLPTM1-211ENST00000589347 PHACTR3Q96KR7 559 aa14.05□□□□□ -0.16
CLPTM1-211ENST00000589347 HEG1Q9ULI3 1381 aa14.05□□□□□ -0.16
CLPTM1-211ENST00000589347 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 STARD3NLO95772 234 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 MMP10P09238 476 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 TEX13AQ9BXU3 409 aaPredicted RBP14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 USP42Q9H9J4 1324 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 DLEC1Q9Y238 1755 aa14.04□□□□□ -0.16
CLPTM1-211ENST00000589347 BTBD11A6QL63 1104 aa14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 ZPR1O75312 459 aa14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 CYP19A1P11511 503 aaPredicted RBP14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 SOS1Q07889 1333 aaPredicted RBP14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 NRXN2Q9P2S2 1712 aa14.03□□□□□ -0.16
CLPTM1-211ENST00000589347 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
CLPTM1-211ENST00000589347 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
CLPTM1-211ENST00000589347 GYS1P13807 737 aa14.02□□□□□ -0.17
CLPTM1-211ENST00000589347 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
CLPTM1-211ENST00000589347 A0A087WZG4 1122 aa14.01□□□□□ -0.17
CLPTM1-211ENST00000589347 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
CLPTM1-211ENST00000589347 INTS5Q6P9B9 1019 aaKnown RBP14.01□□□□□ -0.17
CLPTM1-211ENST00000589347 ARHGAP27Q6ZUM4 889 aa14.01□□□□□ -0.17
CLPTM1-211ENST00000589347 ZBTB1Q9Y2K1 713 aa14.01□□□□□ -0.17
CLPTM1-211ENST00000589347 KDM2BQ8NHM5 1336 aa14□□□□□ -0.17
CLPTM1-211ENST00000589347 A0A0G2JLW4 131 aa14□□□□□ -0.17
CLPTM1-211ENST00000589347 MCM10Q7L590 875 aa14□□□□□ -0.17
CLPTM1-211ENST00000589347 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
CLPTM1-211ENST00000589347 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 NFE2L2Q16236 605 aa13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 SRP68Q9UHB9 627 aaKnown RBP13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 SBF1O95248 1867 aa13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 CACNA1SQ13698 1873 aa13.99□□□□□ -0.17
CLPTM1-211ENST00000589347 DPEP1P16444 411 aa13.98□□□□□ -0.17
CLPTM1-211ENST00000589347 KCNA3P22001 575 aa13.98□□□□□ -0.17
CLPTM1-211ENST00000589347 CANXP27824 592 aaKnown RBP13.98□□□□□ -0.17
CLPTM1-211ENST00000589347 LMOD3Q0VAK6 560 aa13.98□□□□□ -0.17
CLPTM1-211ENST00000589347 USPL1Q5W0Q7 1092 aa13.98□□□□□ -0.17
CLPTM1-211ENST00000589347 NARFQ9UHQ1 456 aa13.98□□□□□ -0.17
CLPTM1-211ENST00000589347 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
CLPTM1-211ENST00000589347 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 IL6STP40189 918 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 FKBP8Q14318 412 aa13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 NUP98P52948 1817 aa13.96□□□□□ -0.17
CLPTM1-211ENST00000589347 ANKRD31Q8N7Z5 1873 aa13.95□□□□□ -0.18
CLPTM1-211ENST00000589347 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
CLPTM1-211ENST00000589347 EIF5P55010 431 aaKnown RBP13.94□□□□□ -0.18
CLPTM1-211ENST00000589347 PRKRIP1Q9H875 184 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-211ENST00000589347 RRAGCQ9HB90 399 aa13.94□□□□□ -0.18
CLPTM1-211ENST00000589347 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
CLPTM1-211ENST00000589347 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
CLPTM1-211ENST00000589347 POLRMTO00411 1230 aaKnown RBP13.93□□□□□ -0.18
CLPTM1-211ENST00000589347 KCNQ3O43525 872 aa13.93□□□□□ -0.18
CLPTM1-211ENST00000589347 DDR1Q08345 913 aa13.93□□□□□ -0.18
CLPTM1-211ENST00000589347 ANKRD36CQ5JPF3 1778 aa13.93□□□□□ -0.18
CLPTM1-211ENST00000589347 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
CLPTM1-211ENST00000589347 PIM2Q9P1W9 311 aa13.92□□□□□ -0.18
CLPTM1-211ENST00000589347 ZNF652Q9Y2D9 606 aa13.92□□□□□ -0.18
CLPTM1-211ENST00000589347 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
CLPTM1-211ENST00000589347 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
CLPTM1-211ENST00000589347 TM4SF1P30408 202 aa13.91□□□□□ -0.18
CLPTM1-211ENST00000589347 RIPK4P57078 832 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms