RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 ANO2Q9NQ90 1003 aa5.53□□□□□ -1.52
ZNF540-207ENST00000589285 SMARCA4P51532 1647 aa5.53□□□□□ -1.52
ZNF540-207ENST00000589285 SMTNP53814 917 aa5.53□□□□□ -1.52
ZNF540-207ENST00000589285 FKBP5Q13451 457 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-207ENST00000589285 LYSMD3Q7Z3D4 306 aa5.52□□□□□ -1.53
ZNF540-207ENST00000589285 L3MBTL2Q969R5 705 aa5.52□□□□□ -1.53
ZNF540-207ENST00000589285 HSH2DQ96JZ2 352 aa5.52□□□□□ -1.53
ZNF540-207ENST00000589285 SAP130Q9H0E3 1048 aa5.52□□□□□ -1.53
ZNF540-207ENST00000589285 SCHIP1Q9P0W5 487 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-207ENST00000589285 SEC13P55735 322 aa5.52□□□□□ -1.53
ZNF540-207ENST00000589285 FAM196BA6NMK8 535 aa5.52□□□□□ -1.53
ZNF540-207ENST00000589285 BAZ1AQ9NRL2 1556 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-207ENST00000589285 TMEM88BA6NKF7 163 aa5.51□□□□□ -1.53
ZNF540-207ENST00000589285 NBPF10Q6P3W6 841 aaKnown RBP5.51□□□□□ -1.53
ZNF540-207ENST00000589285 NBPF15Q8N660 670 aa5.51□□□□□ -1.53
ZNF540-207ENST00000589285 GPR161Q8N6U8 529 aaKnown RBP5.51□□□□□ -1.53
ZNF540-207ENST00000589285 ZNF280CQ8ND82 737 aa5.51□□□□□ -1.53
ZNF540-207ENST00000589285 GRIP2Q9C0E4 1043 aa5.51□□□□□ -1.53
ZNF540-207ENST00000589285 SIX5Q8N196 739 aa5.51□□□□□ -1.53
ZNF540-207ENST00000589285 FAM200AQ8TCP9 573 aa5.51□□□□□ -1.53
ZNF540-207ENST00000589285 PPP1R12BO60237 982 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-207ENST00000589285 PHLDB3Q6NSJ2 640 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 LARGE2Q8N3Y3 721 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 CCDC155Q8N6L0 562 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 XAGE2Q96GT9 111 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 KLK14Q9P0G3 267 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 ATP4AP20648 1035 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 ARSJQ5FYB0 599 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-207ENST00000589285 ATP1A2P50993 1020 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 MCCD1P59942 119 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-207ENST00000589285 OCLNQ16625 522 aa5.5□□□□□ -1.53
ZNF540-207ENST00000589285 RAB44Q7Z6P3 723 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-207ENST00000589285 DCDC2BA2VCK2 349 aa5.49□□□□□ -1.53
ZNF540-207ENST00000589285 WASLO00401 505 aaPredicted RBP5.49□□□□□ -1.53
ZNF540-207ENST00000589285 DBN1Q16643 649 aa5.49□□□□□ -1.53
ZNF540-207ENST00000589285 RNFT1Q5M7Z0 435 aa5.49□□□□□ -1.53
ZNF540-207ENST00000589285 VWA5B2Q8N398 1253 aa5.49□□□□□ -1.53
ZNF540-207ENST00000589285 GTPBP3Q969Y2 492 aaKnown RBP5.49□□□□□ -1.53
ZNF540-207ENST00000589285 TIMMDC1Q9NPL8 285 aa5.49□□□□□ -1.53
ZNF540-207ENST00000589285 LRFN2Q9ULH4 789 aa5.49□□□□□ -1.53
ZNF540-207ENST00000589285 SERPINB4P48594 390 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 TAS1R3Q7RTX0 852 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 TRIM50Q86XT4 487 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 ATAD2Q6PL18 1390 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 WDR62O43379 1518 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 PPFIA3O75145 1194 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 RNF144AP50876 292 aaPredicted RBP5.48□□□□□ -1.53
ZNF540-207ENST00000589285 MROH2BQ7Z745 1585 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 PPARGC1BQ86YN6 1023 aaKnown RBP5.48□□□□□ -1.53
ZNF540-207ENST00000589285 SIRT1Q96EB6 747 aa5.48□□□□□ -1.53
ZNF540-207ENST00000589285 ATAD2BQ9ULI0 1458 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 EML1O00423 815 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 ZBTB39O15060 712 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 ATG7O95352 703 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.47□□□□□ -1.53
ZNF540-207ENST00000589285 LRRC69Q6ZNQ3 347 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 SLC4A9Q96Q91 983 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 NOS2P35228 1153 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 NFX1Q12986 1120 aaKnown RBP5.47□□□□□ -1.53
ZNF540-207ENST00000589285 FAM9AQ8IZU1 332 aaPredicted RBP5.47□□□□□ -1.53
ZNF540-207ENST00000589285 ZNF592Q92610 1267 aa5.47□□□□□ -1.53
ZNF540-207ENST00000589285 FOXK2Q01167 660 aa5.46□□□□□ -1.53
ZNF540-207ENST00000589285 ZNF211Q13398 564 aaPredicted RBP5.46□□□□□ -1.53
ZNF540-207ENST00000589285 MTFR1Q15390 333 aa5.46□□□□□ -1.53
ZNF540-207ENST00000589285 ATCAYQ86WG3 371 aa5.46□□□□□ -1.53
ZNF540-207ENST00000589285 RHBDD1Q8TEB9 315 aa5.46□□□□□ -1.53
ZNF540-207ENST00000589285 PHACTR1Q9C0D0 580 aa5.46□□□□□ -1.53
ZNF540-207ENST00000589285 RBM19Q9Y4C8 960 aaKnown RBP5.46□□□□□ -1.53
ZNF540-207ENST00000589285 RSF1Q96T23 1441 aaPredicted RBP5.46□□□□□ -1.54
ZNF540-207ENST00000589285 SLC35F4A4IF30 521 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 ITGA6P23229 1130 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 KRT76Q01546 638 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 ESCO1Q5FWF5 840 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 BICDL1Q6ZP65 573 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 ALDH16A1Q8IZ83 802 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 BCS1LQ9Y276 419 aa5.46□□□□□ -1.54
ZNF540-207ENST00000589285 ABHD17AQ96GS6 310 aa5.45□□□□□ -1.54
ZNF540-207ENST00000589285 NIFKQ9BYG3 293 aaKnown RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 ZCCHC2Q9C0B9 1178 aaKnown RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 NXF1Q9UBU9 619 aaKnown RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 MSX1P28360 303 aa5.45□□□□□ -1.54
ZNF540-207ENST00000589285 C2orf49Q9BVC5 232 aaPredicted RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 ACIN1Q9UKV3 1341 aaKnown RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 BAZ1BQ9UIG0 1483 aaKnown RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 ATP2B4P23634 1241 aa5.45□□□□□ -1.54
ZNF540-207ENST00000589285 ZNF837Q96EG3 531 aaPredicted RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 QTRT2Q9H974 415 aaKnown RBP5.45□□□□□ -1.54
ZNF540-207ENST00000589285 SENP2Q9HC62 589 aa5.45□□□□□ -1.54
ZNF540-207ENST00000589285 STRN4Q9NRL3 753 aa5.45□□□□□ -1.54
ZNF540-207ENST00000589285 WEE1P30291 646 aa5.44□□□□□ -1.54
ZNF540-207ENST00000589285 SERTM1A2A2V5 107 aa5.44□□□□□ -1.54
ZNF540-207ENST00000589285 A6NHS1 94 aa5.44□□□□□ -1.54
ZNF540-207ENST00000589285 ABL1P00519 1130 aa5.44□□□□□ -1.54
ZNF540-207ENST00000589285 GNASQ5JWF2 1037 aa5.44□□□□□ -1.54
ZNF540-207ENST00000589285 WIZO95785 1651 aa5.43□□□□□ -1.54
ZNF540-207ENST00000589285 TERTO14746 1132 aaKnown RBP5.43□□□□□ -1.54
ZNF540-207ENST00000589285 BACH1O14867 736 aa5.43□□□□□ -1.54
ZNF540-207ENST00000589285 DGKZQ13574 1117 aa5.43□□□□□ -1.54
ZNF540-207ENST00000589285 AEBP1Q8IUX7 1158 aa5.43□□□□□ -1.54
ZNF540-207ENST00000589285 C7orf43Q8WVR3 580 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms