RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 FMNL2Q96PY5 1086 aa20.15■□□□□ 0.82
ERCC1-209ENST00000589214 C10orf71Q711Q0 1435 aa20.14■□□□□ 0.81
ERCC1-209ENST00000589214 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
ERCC1-209ENST00000589214 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
ERCC1-209ENST00000589214 CHD4Q14839 1912 aa20.14■□□□□ 0.81
ERCC1-209ENST00000589214 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
ERCC1-209ENST00000589214 STARD3NLO95772 234 aa20.13■□□□□ 0.81
ERCC1-209ENST00000589214 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.81
ERCC1-209ENST00000589214 FKBP8Q14318 412 aa20.13■□□□□ 0.81
ERCC1-209ENST00000589214 NFE2L2Q16236 605 aa20.13■□□□□ 0.81
ERCC1-209ENST00000589214 USPL1Q5W0Q7 1092 aa20.12■□□□□ 0.81
ERCC1-209ENST00000589214 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
ERCC1-209ENST00000589214 WWC3Q9ULE0 1092 aa20.12■□□□□ 0.81
ERCC1-209ENST00000589214 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
ERCC1-209ENST00000589214 KDM3BQ7LBC6 1761 aa20.12■□□□□ 0.81
ERCC1-209ENST00000589214 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
ERCC1-209ENST00000589214 ZPR1O75312 459 aa20.11■□□□□ 0.81
ERCC1-209ENST00000589214 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
ERCC1-209ENST00000589214 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
ERCC1-209ENST00000589214 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
ERCC1-209ENST00000589214 TEX13AQ9BXU3 409 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-209ENST00000589214 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-209ENST00000589214 LAMB4A4D0S4 1761 aa20.1■□□□□ 0.81
ERCC1-209ENST00000589214 DDR1Q08345 913 aa20.09■□□□□ 0.81
ERCC1-209ENST00000589214 WDR43Q15061 677 aaKnown RBP eCLIP20.09■□□□□ 0.81
ERCC1-209ENST00000589214 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
ERCC1-209ENST00000589214 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
ERCC1-209ENST00000589214 NARFQ9UHQ1 456 aa20.09■□□□□ 0.81
ERCC1-209ENST00000589214 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
ERCC1-209ENST00000589214 ANP32CO43423 234 aa20.08■□□□□ 0.81
ERCC1-209ENST00000589214 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
ERCC1-209ENST00000589214 A1BGP04217 495 aa20.07■□□□□ 0.8
ERCC1-209ENST00000589214 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
ERCC1-209ENST00000589214 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
ERCC1-209ENST00000589214 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
ERCC1-209ENST00000589214 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
ERCC1-209ENST00000589214 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
ERCC1-209ENST00000589214 AFDNP55196 1824 aaKnown RBP20.05■□□□□ 0.8
ERCC1-209ENST00000589214 A0A087WZG4 1122 aa20.05■□□□□ 0.8
ERCC1-209ENST00000589214 POLRMTO00411 1230 aaKnown RBP20.05■□□□□ 0.8
ERCC1-209ENST00000589214 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
ERCC1-209ENST00000589214 SNRPA1P09661 255 aaKnown RBP20.05■□□□□ 0.8
ERCC1-209ENST00000589214 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
ERCC1-209ENST00000589214 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
ERCC1-209ENST00000589214 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
ERCC1-209ENST00000589214 NFIXQ14938 502 aa20.04■□□□□ 0.8
ERCC1-209ENST00000589214 NRXN2Q9P2S2 1712 aa20.04■□□□□ 0.8
ERCC1-209ENST00000589214 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
ERCC1-209ENST00000589214 TM4SF1P30408 202 aa20.03■□□□□ 0.8
ERCC1-209ENST00000589214 RIPK4P57078 832 aa20.03■□□□□ 0.8
ERCC1-209ENST00000589214 PNISRQ8TF01 805 aaKnown RBP20.03■□□□□ 0.8
ERCC1-209ENST00000589214 TBC1D2BQ9UPU7 963 aa20.03■□□□□ 0.8
ERCC1-209ENST00000589214 RRP7AQ9Y3A4 280 aaKnown RBP20.03■□□□□ 0.8
ERCC1-209ENST00000589214 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
ERCC1-209ENST00000589214 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.8
ERCC1-209ENST00000589214 TGFB2P61812 414 aa20.02■□□□□ 0.8
ERCC1-209ENST00000589214 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
ERCC1-209ENST00000589214 DPEP1P16444 411 aa20.01■□□□□ 0.79
ERCC1-209ENST00000589214 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
ERCC1-209ENST00000589214 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
ERCC1-209ENST00000589214 UTRNP46939 3433 aa20.01■□□□□ 0.79
ERCC1-209ENST00000589214 LMOD3Q0VAK6 560 aa20■□□□□ 0.79
ERCC1-209ENST00000589214 RUNDC1Q96C34 613 aa20■□□□□ 0.79
ERCC1-209ENST00000589214 DZIP3Q86Y13 1208 aaKnown RBP19.99■□□□□ 0.79
ERCC1-209ENST00000589214 ZNF784Q8NCA9 323 aaPredicted RBP19.99■□□□□ 0.79
ERCC1-209ENST00000589214 BCS1LQ9Y276 419 aa19.99■□□□□ 0.79
ERCC1-209ENST00000589214 CAMTA2O94983 1202 aa19.98■□□□□ 0.79
ERCC1-209ENST00000589214 SERPINB2P05120 415 aa19.98■□□□□ 0.79
ERCC1-209ENST00000589214 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
ERCC1-209ENST00000589214 TBC1D9BQ66K14 1250 aa19.98■□□□□ 0.79
ERCC1-209ENST00000589214 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
ERCC1-209ENST00000589214 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
ERCC1-209ENST00000589214 CARMIL3Q8ND23 1372 aa19.97■□□□□ 0.79
ERCC1-209ENST00000589214 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
ERCC1-209ENST00000589214 NBPF26B4DH59 902 aa19.97■□□□□ 0.79
ERCC1-209ENST00000589214 NBPF10Q6P3W6 841 aaKnown RBP19.97■□□□□ 0.79
ERCC1-209ENST00000589214 NBPF15Q8N660 670 aa19.97■□□□□ 0.79
ERCC1-209ENST00000589214 DLEC1Q9Y238 1755 aa19.96■□□□□ 0.79
ERCC1-209ENST00000589214 CHRNA5P30532 468 aa19.96■□□□□ 0.79
ERCC1-209ENST00000589214 ARFGEF1Q9Y6D6 1849 aa19.95■□□□□ 0.78
ERCC1-209ENST00000589214 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
ERCC1-209ENST00000589214 GIGYF1O75420 1035 aaPredicted RBP19.95■□□□□ 0.78
ERCC1-209ENST00000589214 ANKRD31Q8N7Z5 1873 aa19.94■□□□□ 0.78
ERCC1-209ENST00000589214 KCNA3P22001 575 aa19.94■□□□□ 0.78
ERCC1-209ENST00000589214 PIM2Q9P1W9 311 aa19.93■□□□□ 0.78
ERCC1-209ENST00000589214 COL11A2P13942 1736 aaPredicted RBP19.93■□□□□ 0.78
ERCC1-209ENST00000589214 APAF1O14727 1248 aa19.92■□□□□ 0.78
ERCC1-209ENST00000589214 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
ERCC1-209ENST00000589214 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
ERCC1-209ENST00000589214 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
ERCC1-209ENST00000589214 ATP10DQ9P241 1426 aa19.91■□□□□ 0.78
ERCC1-209ENST00000589214 NPHP1O15259 732 aa19.9■□□□□ 0.78
ERCC1-209ENST00000589214 DALRD3Q5D0E6 543 aaKnown RBP19.9■□□□□ 0.78
ERCC1-209ENST00000589214 PRR5LQ6MZQ0 368 aa19.9■□□□□ 0.78
ERCC1-209ENST00000589214 CCDC24Q8N4L8 307 aa19.9■□□□□ 0.78
ERCC1-209ENST00000589214 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
ERCC1-209ENST00000589214 LAS1LQ9Y4W2 734 aaKnown RBP19.9■□□□□ 0.78
ERCC1-209ENST00000589214 ADCY9O60503 1353 aa19.9■□□□□ 0.78
ERCC1-209ENST00000589214 MYL6BP14649 208 aa19.89■□□□□ 0.77
ERCC1-209ENST00000589214 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms