RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 PNISRQ8TF01 805 aaKnown RBP18.3■□□□□ 0.52
ERCC1-208ENST00000589165 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
ERCC1-208ENST00000589165 UTRNP46939 3433 aa18.3■□□□□ 0.52
ERCC1-208ENST00000589165 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
ERCC1-208ENST00000589165 RIPK4P57078 832 aa18.29■□□□□ 0.52
ERCC1-208ENST00000589165 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
ERCC1-208ENST00000589165 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
ERCC1-208ENST00000589165 COL15A1P39059 1388 aa18.28■□□□□ 0.52
ERCC1-208ENST00000589165 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
ERCC1-208ENST00000589165 EIF5P55010 431 aaKnown RBP18.27■□□□□ 0.52
ERCC1-208ENST00000589165 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
ERCC1-208ENST00000589165 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.52
ERCC1-208ENST00000589165 ZPR1O75312 459 aa18.26■□□□□ 0.51
ERCC1-208ENST00000589165 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
ERCC1-208ENST00000589165 THUMPD2Q9BTF0 503 aaKnown RBP18.26■□□□□ 0.51
ERCC1-208ENST00000589165 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
ERCC1-208ENST00000589165 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
ERCC1-208ENST00000589165 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
ERCC1-208ENST00000589165 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
ERCC1-208ENST00000589165 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
ERCC1-208ENST00000589165 A0A087WZG4 1122 aa18.25■□□□□ 0.51
ERCC1-208ENST00000589165 FKBP8Q14318 412 aa18.25■□□□□ 0.51
ERCC1-208ENST00000589165 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
ERCC1-208ENST00000589165 C4AP0C0L4 1744 aa18.24■□□□□ 0.51
ERCC1-208ENST00000589165 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
ERCC1-208ENST00000589165 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
ERCC1-208ENST00000589165 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
ERCC1-208ENST00000589165 A1BGP04217 495 aa18.23■□□□□ 0.51
ERCC1-208ENST00000589165 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
ERCC1-208ENST00000589165 ANP32CO43423 234 aa18.22■□□□□ 0.51
ERCC1-208ENST00000589165 TM4SF1P30408 202 aa18.22■□□□□ 0.51
ERCC1-208ENST00000589165 EIF4A1P60842 406 aaKnown RBP18.22■□□□□ 0.51
ERCC1-208ENST00000589165 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
ERCC1-208ENST00000589165 DDR1Q08345 913 aa18.21■□□□□ 0.51
ERCC1-208ENST00000589165 GPR162Q16538 588 aa18.21■□□□□ 0.51
ERCC1-208ENST00000589165 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
ERCC1-208ENST00000589165 TRIM35Q9UPQ4 493 aa18.21■□□□□ 0.51
ERCC1-208ENST00000589165 C10orf71Q711Q0 1435 aa18.21■□□□□ 0.51
ERCC1-208ENST00000589165 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-208ENST00000589165 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
ERCC1-208ENST00000589165 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
ERCC1-208ENST00000589165 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
ERCC1-208ENST00000589165 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
ERCC1-208ENST00000589165 TSPYL4Q9UJ04 414 aa18.2■□□□□ 0.5
ERCC1-208ENST00000589165 TGFB2P61812 414 aa18.19■□□□□ 0.5
ERCC1-208ENST00000589165 NFIXQ14938 502 aa18.19■□□□□ 0.5
ERCC1-208ENST00000589165 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
ERCC1-208ENST00000589165 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-208ENST00000589165 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
ERCC1-208ENST00000589165 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
ERCC1-208ENST00000589165 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
ERCC1-208ENST00000589165 YBX3P16989 372 aaKnown RBP eCLIP18.17■□□□□ 0.53e-8■□□□□ 9.1
ERCC1-208ENST00000589165 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
ERCC1-208ENST00000589165 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
ERCC1-208ENST00000589165 CHL1O00533 1208 aa18.16■□□□□ 0.5
ERCC1-208ENST00000589165 APAF1O14727 1248 aa18.16■□□□□ 0.5
ERCC1-208ENST00000589165 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
ERCC1-208ENST00000589165 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
ERCC1-208ENST00000589165 PXDNLA1KZ92 1463 aa18.16■□□□□ 0.5
ERCC1-208ENST00000589165 RGL2O15211 777 aa18.15■□□□□ 0.5
ERCC1-208ENST00000589165 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
ERCC1-208ENST00000589165 YY1P25490 414 aa18.14■□□□□ 0.5
ERCC1-208ENST00000589165 PIP4K2AP48426 406 aaPredicted RBP18.14■□□□□ 0.5
ERCC1-208ENST00000589165 MRS2Q9HD23 443 aa18.14■□□□□ 0.5
ERCC1-208ENST00000589165 CLEC4GQ6UXB4 293 aa18.14■□□□□ 0.49
ERCC1-208ENST00000589165 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
ERCC1-208ENST00000589165 KIF13BQ9NQT8 1826 aa18.13■□□□□ 0.49
ERCC1-208ENST00000589165 SERPINB2P05120 415 aa18.13■□□□□ 0.49
ERCC1-208ENST00000589165 TBC1D9BQ66K14 1250 aa18.13■□□□□ 0.49
ERCC1-208ENST00000589165 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
ERCC1-208ENST00000589165 DPEP1P16444 411 aa18.12■□□□□ 0.49
ERCC1-208ENST00000589165 CFAP44Q96MT7 982 aa18.12■□□□□ 0.49
ERCC1-208ENST00000589165 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
ERCC1-208ENST00000589165 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
ERCC1-208ENST00000589165 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
ERCC1-208ENST00000589165 ZNF853P0CG23 659 aa18.1■□□□□ 0.49
ERCC1-208ENST00000589165 KCNA3P22001 575 aa18.1■□□□□ 0.49
ERCC1-208ENST00000589165 SETDB2Q96T68 719 aa18.1■□□□□ 0.49
ERCC1-208ENST00000589165 ZNF652Q9Y2D9 606 aa18.1■□□□□ 0.49
ERCC1-208ENST00000589165 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
ERCC1-208ENST00000589165 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
ERCC1-208ENST00000589165 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
ERCC1-208ENST00000589165 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
ERCC1-208ENST00000589165 IFT57Q9NWB7 429 aa18.08■□□□□ 0.49
ERCC1-208ENST00000589165 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.49
ERCC1-208ENST00000589165 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 HOXB7P09629 217 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 NRXN2Q9P2S2 1712 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 GNAI1P63096 354 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 PDIA6Q15084 440 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 LRP10Q7Z4F1 713 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 WWC3Q9ULE0 1092 aa18.07■□□□□ 0.48
ERCC1-208ENST00000589165 MYL6BP14649 208 aa18.06■□□□□ 0.48
ERCC1-208ENST00000589165 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
ERCC1-208ENST00000589165 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
ERCC1-208ENST00000589165 BRIP1Q9BX63 1249 aa18.06■□□□□ 0.48
ERCC1-208ENST00000589165 MAP3K15Q6ZN16 1313 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms