RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TLL1O43897 1013 aa11.69□□□□□ -0.54
ATG4D-210ENST00000588972 ADH1BP00325 375 aa11.69□□□□□ -0.54
ATG4D-210ENST00000588972 ATP1A2P50993 1020 aa11.69□□□□□ -0.54
ATG4D-210ENST00000588972 PZPP20742 1482 aa11.69□□□□□ -0.54
ATG4D-210ENST00000588972 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
ATG4D-210ENST00000588972 DKK1O94907 266 aa11.68□□□□□ -0.54
ATG4D-210ENST00000588972 SERPINB4P48594 390 aa11.68□□□□□ -0.54
ATG4D-210ENST00000588972 LARGE2Q8N3Y3 721 aa11.68□□□□□ -0.54
ATG4D-210ENST00000588972 DOLKQ9UPQ8 538 aa11.68□□□□□ -0.54
ATG4D-210ENST00000588972 KIAA1024Q9UPX6 916 aa11.68□□□□□ -0.54
ATG4D-210ENST00000588972 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
ATG4D-210ENST00000588972 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 TNRQ92752 1358 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 EHBP1L1Q8N3D4 1523 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
ATG4D-210ENST00000588972 HSPA1LP34931 641 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 SH3RF1Q7Z6J0 888 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 SIX5Q8N196 739 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 VWDEQ8N2E2 1590 aa11.67□□□□□ -0.54
ATG4D-210ENST00000588972 TOM1O60784 492 aa11.66□□□□□ -0.54
ATG4D-210ENST00000588972 ZPR1O75312 459 aa11.66□□□□□ -0.54
ATG4D-210ENST00000588972 SCNN1AP37088 669 aa11.66□□□□□ -0.54
ATG4D-210ENST00000588972 PIP4K2BP78356 416 aa11.66□□□□□ -0.54
ATG4D-210ENST00000588972 DNAJC14Q6Y2X3 702 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-210ENST00000588972 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-210ENST00000588972 DHX29Q7Z478 1369 aaKnown RBP11.66□□□□□ -0.54
ATG4D-210ENST00000588972 NLRP1Q9C000 1473 aa11.65□□□□□ -0.54
ATG4D-210ENST00000588972 DEPDC5O75140 1603 aa11.65□□□□□ -0.54
ATG4D-210ENST00000588972 MAGEB6P1A0A0J9YX57 407 aa11.65□□□□□ -0.54
ATG4D-210ENST00000588972 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
ATG4D-210ENST00000588972 OXLD1Q5BKU9 147 aa11.65□□□□□ -0.54
ATG4D-210ENST00000588972 C1orf216Q8TAB5 229 aa11.65□□□□□ -0.54
ATG4D-210ENST00000588972 SYNMO15061 1565 aa11.64□□□□□ -0.55
ATG4D-210ENST00000588972 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
ATG4D-210ENST00000588972 UNCXA6NJT0 531 aa11.64□□□□□ -0.55
ATG4D-210ENST00000588972 GTF2IP78347 998 aa11.64□□□□□ -0.55
ATG4D-210ENST00000588972 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
ATG4D-210ENST00000588972 MED14O60244 1454 aa11.63□□□□□ -0.55
ATG4D-210ENST00000588972 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
ATG4D-210ENST00000588972 UGGT1Q9NYU2 1555 aa11.63□□□□□ -0.55
ATG4D-210ENST00000588972 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
ATG4D-210ENST00000588972 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
ATG4D-210ENST00000588972 THSD4Q6ZMP0 1018 aa11.63□□□□□ -0.55
ATG4D-210ENST00000588972 RNF17Q9BXT8 1623 aaKnown RBP11.63□□□□□ -0.55
ATG4D-210ENST00000588972 ZNF644Q9H582 1327 aaPredicted RBP11.62□□□□□ -0.55
ATG4D-210ENST00000588972 ERCC3P19447 782 aa11.62□□□□□ -0.55
ATG4D-210ENST00000588972 SEC13P55735 322 aa11.62□□□□□ -0.55
ATG4D-210ENST00000588972 NOM1Q5C9Z4 860 aaKnown RBP11.62□□□□□ -0.55
ATG4D-210ENST00000588972 BAP1Q92560 729 aa11.62□□□□□ -0.55
ATG4D-210ENST00000588972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATG4D-210ENST00000588972 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
ATG4D-210ENST00000588972 PRMT3O60678 531 aa11.61□□□□□ -0.55
ATG4D-210ENST00000588972 OCLNQ16625 522 aa11.61□□□□□ -0.55
ATG4D-210ENST00000588972 BPHLQ86WA6 291 aaPredicted RBP11.61□□□□□ -0.55
ATG4D-210ENST00000588972 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
ATG4D-210ENST00000588972 MTRQ99707 1265 aa11.61□□□□□ -0.55
ATG4D-210ENST00000588972 CAMSAP2Q08AD1 1489 aa11.61□□□□□ -0.55
ATG4D-210ENST00000588972 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
ATG4D-210ENST00000588972 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 ZC3H13Q5T200 1668 aaKnown RBP11.6□□□□□ -0.55
ATG4D-210ENST00000588972 KIF3BO15066 747 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 C4orf48Q5BLP8 95 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
ATG4D-210ENST00000588972 FOXJ1Q92949 421 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
ATG4D-210ENST00000588972 PCDHGA11Q9Y5H2 935 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
ATG4D-210ENST00000588972 NCOA2Q15596 1464 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 LINC01559Q495D7 138 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 RNF20Q5VTR2 975 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
ATG4D-210ENST00000588972 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.55
ATG4D-210ENST00000588972 MARSP56192 900 aaKnown RBP11.58□□□□□ -0.56
ATG4D-210ENST00000588972 AGERQ15109 404 aa11.58□□□□□ -0.56
ATG4D-210ENST00000588972 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
ATG4D-210ENST00000588972 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
ATG4D-210ENST00000588972 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
ATG4D-210ENST00000588972 RBM19Q9Y4C8 960 aaKnown RBP11.58□□□□□ -0.56
ATG4D-210ENST00000588972 STRCP1A6NGW2 1772 aa11.57□□□□□ -0.56
ATG4D-210ENST00000588972 ABCC3O15438 1527 aa11.57□□□□□ -0.56
ATG4D-210ENST00000588972 LRRC7Q96NW7 1537 aa11.57□□□□□ -0.56
ATG4D-210ENST00000588972 ESPNB1AK53 854 aa11.57□□□□□ -0.56
ATG4D-210ENST00000588972 SLC10A4Q96EP9 437 aa11.57□□□□□ -0.56
ATG4D-210ENST00000588972 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
ATG4D-210ENST00000588972 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
ATG4D-210ENST00000588972 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
ATG4D-210ENST00000588972 EGFL7Q9UHF1 273 aa11.56□□□□□ -0.56
ATG4D-210ENST00000588972 PCDHB11Q9Y5F2 797 aa11.56□□□□□ -0.56
ATG4D-210ENST00000588972 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
ATG4D-210ENST00000588972 PSME1Q06323 249 aa11.55□□□□□ -0.56
ATG4D-210ENST00000588972 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms