RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 MST1RQ04912 1400 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 EP400Q96L91 3159 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 KDM3BQ7LBC6 1761 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 BTBD11A6QL63 1104 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 POLA2Q14181 598 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 CNTROBQ8N137 903 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 IL17RAQ96F46 866 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 HYPKQ9NX55 129 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 BRPF3Q9ULD4 1205 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 EXOC6BQ9Y2D4 811 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 TTC41PQ6P2S7 1318 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 SALL3Q9BXA9 1300 aa8.72□□□□□ -1.01
SPIDR-228ENST00000588781 ABCC6O95255 1503 aa8.71□□□□□ -1.01
SPIDR-228ENST00000588781 HIP1O00291 1037 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
SPIDR-228ENST00000588781 KLHL40Q2TBA0 621 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 KIAA1211Q6ZU35 1233 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 ARHGEF25Q86VW2 580 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 RILPL2Q969X0 211 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
SPIDR-228ENST00000588781 USP44Q9H0E7 712 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 SLAIN2Q9P270 581 aa8.71□□□□□ -1.02
SPIDR-228ENST00000588781 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 SURF6O75683 361 aaKnown RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 GLRX3O76003 335 aaKnown RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 BAG4O95429 457 aaKnown RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 GCP02774 474 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 CHMLP26374 656 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 MTX1Q13505 466 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 NBPF6Q5VWK0 638 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 PROSER2Q86WR7 435 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 OTUD7AQ8TE49 926 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 ANKRD24Q8TF21 1146 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 NBPF4Q96M43 638 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 GRPEL1Q9HAV7 217 aa8.7□□□□□ -1.02
SPIDR-228ENST00000588781 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
SPIDR-228ENST00000588781 PNMA6EA0A0J9YXQ4 647 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 ZBTB7CA1YPR0 619 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 SRGAP3O43295 1099 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 MBD3O95983 291 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 EIF2S2P20042 333 aaKnown RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 BEND3Q5T5X7 828 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 MEX3CQ5U5Q3 659 aaKnown RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 KSR2Q6VAB6 950 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 KRT28Q7Z3Y7 464 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 PPP1R42Q7Z4L9 355 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 KLHL34Q8N239 644 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 CLASRPQ8N2M8 674 aaKnown RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 USHBP1Q8N6Y0 703 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 RHPN1Q8TCX5 695 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 NECTIN2Q92692 538 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 RBM42Q9BTD8 480 aaKnown RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 ANO2Q9NQ90 1003 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 C9orf78Q9NZ63 289 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 DDX49Q9Y6V7 483 aaKnown RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 DCCP43146 1447 aa8.69□□□□□ -1.02
SPIDR-228ENST00000588781 AHDC1Q5TGY3 1603 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-228ENST00000588781 CYP2E1P05181 493 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-228ENST00000588781 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-228ENST00000588781 SSFA2P28290 1259 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 NEK4P51957 841 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 NEXNQ0ZGT2 675 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 CUL4AQ13619 759 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 TRIM44Q96DX7 344 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-228ENST00000588781 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-228ENST00000588781 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 CHPF2Q9P2E5 772 aa8.68□□□□□ -1.02
SPIDR-228ENST00000588781 PI4KAP2A4QPH2 592 aa8.67□□□□□ -1.02
SPIDR-228ENST00000588781 CD2BP2O95400 341 aaKnown RBP8.67□□□□□ -1.02
SPIDR-228ENST00000588781 XRCC6P12956 609 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPIDR-228ENST00000588781 ATF3P18847 181 aa8.67□□□□□ -1.02
SPIDR-228ENST00000588781 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
SPIDR-228ENST00000588781 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
SPIDR-228ENST00000588781 PI4KAP1Q8N8J0 262 aa8.67□□□□□ -1.02
SPIDR-228ENST00000588781 LINS1Q8NG48 757 aa8.67□□□□□ -1.02
SPIDR-228ENST00000588781 RBM33Q96EV2 1170 aaKnown RBP8.67□□□□□ -1.02
SPIDR-228ENST00000588781 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
SPIDR-228ENST00000588781 DDX21Q9NR30 783 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPIDR-228ENST00000588781 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
SPIDR-228ENST00000588781 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-228ENST00000588781 C1orf167Q5SNV9 1468 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 HEG1Q9ULI3 1381 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 RAD50Q92878 1312 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 WDR33Q9C0J8 1336 aaKnown RBP8.66□□□□□ -1.02
SPIDR-228ENST00000588781 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-228ENST00000588781 PHF14O94880 888 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 IFIT2P09913 472 aaKnown RBP8.66□□□□□ -1.02
SPIDR-228ENST00000588781 HSPA4P34932 840 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 ZNF445P59923 1031 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 CCDC173Q0VFZ6 552 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 G3BP1Q13283 466 aaKnown RBP eCLIP8.66□□□□□ -1.02
SPIDR-228ENST00000588781 MCTP1Q6DN14 999 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms