RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, humanhuman

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-213ENST00000588237 STARD3NLO95772 234 aa17.6■□□□□ 0.41
GRN-213ENST00000588237 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
GRN-213ENST00000588237 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
GRN-213ENST00000588237 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
GRN-213ENST00000588237 SRP68Q9UHB9 627 aaKnown RBP17.6■□□□□ 0.41
GRN-213ENST00000588237 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
GRN-213ENST00000588237 CEMIPQ8WUJ3 1361 aa17.59■□□□□ 0.41
GRN-213ENST00000588237 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
GRN-213ENST00000588237 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
GRN-213ENST00000588237 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
GRN-213ENST00000588237 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
GRN-213ENST00000588237 PARP3Q9Y6F1 533 aa17.59■□□□□ 0.41
GRN-213ENST00000588237 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
GRN-213ENST00000588237 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
GRN-213ENST00000588237 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.4
GRN-213ENST00000588237 SOS1Q07889 1333 aaPredicted RBP17.57■□□□□ 0.4
GRN-213ENST00000588237 KCNQ3O43525 872 aa17.57■□□□□ 0.4
GRN-213ENST00000588237 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
GRN-213ENST00000588237 TEX13AQ9BXU3 409 aaPredicted RBP17.57■□□□□ 0.4
GRN-213ENST00000588237 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
GRN-213ENST00000588237 COL15A1P39059 1388 aa17.56■□□□□ 0.4
GRN-213ENST00000588237 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
GRN-213ENST00000588237 KIF3CO14782 793 aa17.56■□□□□ 0.4
GRN-213ENST00000588237 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
GRN-213ENST00000588237 FKBP8Q14318 412 aa17.56■□□□□ 0.4
GRN-213ENST00000588237 USPL1Q5W0Q7 1092 aa17.56■□□□□ 0.4
GRN-213ENST00000588237 TGFB2P61812 414 aa17.54■□□□□ 0.4
GRN-213ENST00000588237 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
GRN-213ENST00000588237 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
GRN-213ENST00000588237 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
GRN-213ENST00000588237 PLEKHF1Q96S99 279 aa17.53■□□□□ 0.4
GRN-213ENST00000588237 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
GRN-213ENST00000588237 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
GRN-213ENST00000588237 A0A087WZG4 1122 aa17.52■□□□□ 0.4
GRN-213ENST00000588237 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
GRN-213ENST00000588237 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
GRN-213ENST00000588237 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
GRN-213ENST00000588237 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
GRN-213ENST00000588237 A1BGP04217 495 aa17.51■□□□□ 0.39
GRN-213ENST00000588237 APLP1P51693 650 aa17.51■□□□□ 0.39
GRN-213ENST00000588237 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
GRN-213ENST00000588237 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
GRN-213ENST00000588237 TOMM70O94826 608 aa17.5■□□□□ 0.39
GRN-213ENST00000588237 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
GRN-213ENST00000588237 DDR1Q08345 913 aa17.5■□□□□ 0.39
GRN-213ENST00000588237 C10orf71Q711Q0 1435 aa17.49■□□□□ 0.39
GRN-213ENST00000588237 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
GRN-213ENST00000588237 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
GRN-213ENST00000588237 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
GRN-213ENST00000588237 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
GRN-213ENST00000588237 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
GRN-213ENST00000588237 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
GRN-213ENST00000588237 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
GRN-213ENST00000588237 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
GRN-213ENST00000588237 DPEP1P16444 411 aa17.48■□□□□ 0.39
GRN-213ENST00000588237 TM4SF1P30408 202 aa17.48■□□□□ 0.39
GRN-213ENST00000588237 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
GRN-213ENST00000588237 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
GRN-213ENST00000588237 RIPK4P57078 832 aa17.48■□□□□ 0.39
GRN-213ENST00000588237 NFIXQ14938 502 aa17.48■□□□□ 0.39
GRN-213ENST00000588237 CCDC146Q8IYE0 955 aa17.48■□□□□ 0.39
GRN-213ENST00000588237 AFDNP55196 1824 aaKnown RBP17.47■□□□□ 0.39
GRN-213ENST00000588237 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
GRN-213ENST00000588237 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
GRN-213ENST00000588237 KIAA1551Q9HCM1 1747 aa17.47■□□□□ 0.39
GRN-213ENST00000588237 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
GRN-213ENST00000588237 SERPINB2P05120 415 aa17.45■□□□□ 0.38
GRN-213ENST00000588237 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
GRN-213ENST00000588237 RRP7AQ9Y3A4 280 aaKnown RBP17.45■□□□□ 0.38
GRN-213ENST00000588237 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
GRN-213ENST00000588237 KDM3BQ7LBC6 1761 aa17.44■□□□□ 0.38
GRN-213ENST00000588237 NPHP1O15259 732 aa17.44■□□□□ 0.38
GRN-213ENST00000588237 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
GRN-213ENST00000588237 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
GRN-213ENST00000588237 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
GRN-213ENST00000588237 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
GRN-213ENST00000588237 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 ARFGEF1Q9Y6D6 1849 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 CHRNA5P30532 468 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
GRN-213ENST00000588237 DNAJC5GQ8N7S2 189 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 TSPYL4Q9UJ04 414 aa17.43■□□□□ 0.38
GRN-213ENST00000588237 C9orf131Q5VYM1 1079 aa17.42■□□□□ 0.38
GRN-213ENST00000588237 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
GRN-213ENST00000588237 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
GRN-213ENST00000588237 KCNA3P22001 575 aa17.41■□□□□ 0.38
GRN-213ENST00000588237 DALRD3Q5D0E6 543 aaKnown RBP17.41■□□□□ 0.38
GRN-213ENST00000588237 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
GRN-213ENST00000588237 RBM46Q8TBY0 533 aaKnown RBP17.41■□□□□ 0.38
GRN-213ENST00000588237 SETDB2Q96T68 719 aa17.41■□□□□ 0.38
GRN-213ENST00000588237 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
GRN-213ENST00000588237 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
GRN-213ENST00000588237 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
GRN-213ENST00000588237 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
GRN-213ENST00000588237 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
GRN-213ENST00000588237 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
GRN-213ENST00000588237 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
GRN-213ENST00000588237 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms