RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 HOXC9P31274 260 aa22.51■■□□□ 1.19
DDX39A-206ENST00000587730 NUTM2FA1L443 756 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 HSPA4P34932 840 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 ANKLE2Q86XL3 938 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 USP44Q9H0E7 712 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 HDAC5Q9UQL6 1122 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 POLA2Q14181 598 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 CSPP1Q1MSJ5 1256 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 CCDC39Q9UFE4 941 aa22.5■■□□□ 1.19
DDX39A-206ENST00000587730 NLRP6P59044 892 aa22.49■■□□□ 1.19
DDX39A-206ENST00000587730 KIF1BPQ96EK5 621 aa22.49■■□□□ 1.19
DDX39A-206ENST00000587730 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
DDX39A-206ENST00000587730 HSP90AA2PQ14568 343 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-206ENST00000587730 HDGFL1Q5TGJ6 251 aa22.48■■□□□ 1.19
DDX39A-206ENST00000587730 FAM184AQ8NB25 1140 aa22.48■■□□□ 1.19
DDX39A-206ENST00000587730 TMEM63CQ9P1W3 806 aa22.48■■□□□ 1.19
DDX39A-206ENST00000587730 AK9Q5TCS8 1911 aa22.47■■□□□ 1.19
DDX39A-206ENST00000587730 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
DDX39A-206ENST00000587730 TMEM87AQ8NBN3 555 aa22.47■■□□□ 1.19
DDX39A-206ENST00000587730 CERKQ8TCT0 537 aa22.47■■□□□ 1.19
DDX39A-206ENST00000587730 LETM1O95202 739 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-206ENST00000587730 IL17REQ8NFR9 667 aa22.46■■□□□ 1.19
DDX39A-206ENST00000587730 SLC26A8Q96RN1 970 aa22.46■■□□□ 1.19
DDX39A-206ENST00000587730 PALD1Q9ULE6 856 aa22.46■■□□□ 1.19
DDX39A-206ENST00000587730 RAD50Q92878 1312 aa22.46■■□□□ 1.19
DDX39A-206ENST00000587730 TSPY26PQ9H489 355 aa22.45■■□□□ 1.19
DDX39A-206ENST00000587730 USP42Q9H9J4 1324 aaKnown RBP22.45■■□□□ 1.19
DDX39A-206ENST00000587730 CEMIPQ8WUJ3 1361 aa22.45■■□□□ 1.18
DDX39A-206ENST00000587730 ADGRL3Q9HAR2 1447 aa22.45■■□□□ 1.18
DDX39A-206ENST00000587730 TTC41PQ6P2S7 1318 aa22.45■■□□□ 1.18
DDX39A-206ENST00000587730 ATP6V1DQ9Y5K8 247 aa22.45■■□□□ 1.18
DDX39A-206ENST00000587730 SYCE3A1L190 88 aa22.44■■□□□ 1.18
DDX39A-206ENST00000587730 PDIA4P13667 645 aaKnown RBP22.44■■□□□ 1.18
DDX39A-206ENST00000587730 UVSSAQ2YD98 709 aa22.44■■□□□ 1.18
DDX39A-206ENST00000587730 ZKSCAN5Q9Y2L8 839 aa22.44■■□□□ 1.18
DDX39A-206ENST00000587730 SGSM2O43147 1006 aa22.43■■□□□ 1.18
DDX39A-206ENST00000587730 TSHZ3Q63HK5 1081 aa22.43■■□□□ 1.18
DDX39A-206ENST00000587730 KIAA1211Q6ZU35 1233 aa22.43■■□□□ 1.18
DDX39A-206ENST00000587730 RHPN1Q8TCX5 695 aa22.43■■□□□ 1.18
DDX39A-206ENST00000587730 RUFY2Q8WXA3 655 aa22.43■■□□□ 1.18
DDX39A-206ENST00000587730 RBM27Q9P2N5 1060 aaKnown RBP22.43■■□□□ 1.18
DDX39A-206ENST00000587730 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
DDX39A-206ENST00000587730 STRCQ7RTU9 1775 aa22.43■■□□□ 1.18
DDX39A-206ENST00000587730 SURF6O75683 361 aaKnown RBP22.43■■□□□ 1.18
DDX39A-206ENST00000587730 MED1Q15648 1581 aaPredicted RBP22.42■■□□□ 1.18
DDX39A-206ENST00000587730 PPP1R42Q7Z4L9 355 aa22.42■■□□□ 1.18
DDX39A-206ENST00000587730 PI4K2BQ8TCG2 481 aa22.41■■□□□ 1.18
DDX39A-206ENST00000587730 GLRX3O76003 335 aaKnown RBP22.41■■□□□ 1.18
DDX39A-206ENST00000587730 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
DDX39A-206ENST00000587730 GPATCH3Q96I76 525 aa22.4■■□□□ 1.18
DDX39A-206ENST00000587730 MTX1Q13505 466 aa22.39■■□□□ 1.17
DDX39A-206ENST00000587730 ERC1Q8IUD2 1116 aa22.39■■□□□ 1.17
DDX39A-206ENST00000587730 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.17
DDX39A-206ENST00000587730 OVOS2A0A0G2JMS6 1433 aa22.38■■□□□ 1.17
DDX39A-206ENST00000587730 SRGAP3O43295 1099 aa22.38■■□□□ 1.17
DDX39A-206ENST00000587730 UNC5CLQ8IV45 518 aa22.38■■□□□ 1.17
DDX39A-206ENST00000587730 DNAAF4Q8WXU2 420 aa22.38■■□□□ 1.17
DDX39A-206ENST00000587730 MARF1Q9Y4F3 1742 aaKnown RBP22.38■■□□□ 1.17
DDX39A-206ENST00000587730 ABTB2Q8N961 1025 aa22.38■■□□□ 1.17
DDX39A-206ENST00000587730 UPF3BQ9BZI7 483 aaKnown RBP22.38■■□□□ 1.17
DDX39A-206ENST00000587730 IL1RAPL2Q9NP60 686 aa22.38■■□□□ 1.17
DDX39A-206ENST00000587730 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
DDX39A-206ENST00000587730 EIF4A1P60842 406 aaKnown RBP22.37■■□□□ 1.17
DDX39A-206ENST00000587730 IP6K1Q92551 441 aa22.37■■□□□ 1.17
DDX39A-206ENST00000587730 NECTIN2Q92692 538 aa22.37■■□□□ 1.17
DDX39A-206ENST00000587730 ZSCAN31Q96LW9 406 aaPredicted RBP22.37■■□□□ 1.17
DDX39A-206ENST00000587730 TTC14Q96N46 770 aa22.37■■□□□ 1.17
DDX39A-206ENST00000587730 MAP7D2Q96T17 732 aa22.37■■□□□ 1.17
DDX39A-206ENST00000587730 CRYBG1Q9Y4K1 1723 aa22.37■■□□□ 1.17
DDX39A-206ENST00000587730 ALDH1L1O75891 902 aa22.36■■□□□ 1.17
DDX39A-206ENST00000587730 CCDC183Q5T5S1 534 aa22.36■■□□□ 1.17
DDX39A-206ENST00000587730 BEND3Q5T5X7 828 aa22.36■■□□□ 1.17
DDX39A-206ENST00000587730 TM6SF1Q9BZW5 370 aa22.36■■□□□ 1.17
DDX39A-206ENST00000587730 LSG1Q9H089 658 aaKnown RBP22.36■■□□□ 1.17
DDX39A-206ENST00000587730 SNX14Q9Y5W7 946 aa22.36■■□□□ 1.17
DDX39A-206ENST00000587730 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
DDX39A-206ENST00000587730 SH2B1Q9NRF2 756 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-206ENST00000587730 ZSCAN22P10073 491 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-206ENST00000587730 PDCL3Q9H2J4 239 aa22.35■■□□□ 1.17
DDX39A-206ENST00000587730 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
DDX39A-206ENST00000587730 RPAP1Q9BWH6 1393 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-206ENST00000587730 HIP1O00291 1037 aa22.34■■□□□ 1.17
DDX39A-206ENST00000587730 UBE2HP62256 183 aa22.34■■□□□ 1.17
DDX39A-206ENST00000587730 FOXD4L5Q5VV16 416 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-206ENST00000587730 USP48Q86UV5 1035 aa22.34■■□□□ 1.17
DDX39A-206ENST00000587730 CLASRPQ8N2M8 674 aaKnown RBP22.34■■□□□ 1.17
DDX39A-206ENST00000587730 FOXD4L4Q8WXT5 416 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-206ENST00000587730 RGPD8O14715 1765 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-206ENST00000587730 KCNH5Q8NCM2 988 aa22.34■■□□□ 1.17
DDX39A-206ENST00000587730 PHAXQ9H814 394 aaKnown RBP22.34■■□□□ 1.17
DDX39A-206ENST00000587730 DIAPH3Q9NSV4 1193 aa22.34■■□□□ 1.17
DDX39A-206ENST00000587730 KDM3BQ7LBC6 1761 aa22.33■■□□□ 1.17
DDX39A-206ENST00000587730 AMOTQ4VCS5 1084 aa22.33■■□□□ 1.16
DDX39A-206ENST00000587730 DBF4Q9UBU7 674 aaPredicted RBP22.33■■□□□ 1.16
DDX39A-206ENST00000587730 SMC3Q9UQE7 1217 aa22.33■■□□□ 1.16
DDX39A-206ENST00000587730 STX6O43752 255 aa22.32■■□□□ 1.16
DDX39A-206ENST00000587730 AKAP4Q5JQC9 854 aa22.32■■□□□ 1.16
DDX39A-206ENST00000587730 VPS53Q5VIR6 699 aa22.32■■□□□ 1.16
DDX39A-206ENST00000587730 KCNB2Q92953 911 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms