RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 KIF1BPQ96EK5 621 aa16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 TMEM63CQ9P1W3 806 aa16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 METP08581 1390 aa16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 CHMLP26374 656 aa16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 DNM1Q05193 864 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 CSPP1Q1MSJ5 1256 aa16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 KCNA6P17658 529 aa16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 FSD2A1L4K1 749 aa16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 GJB2P29033 226 aa16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-209ENST00000587525 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 PTPRCP08575 1304 aa16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
CACNA1A-209ENST00000587525 AK2P54819 239 aa16.39■□□□□ 0.22
CACNA1A-209ENST00000587525 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.22
CACNA1A-209ENST00000587525 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.22
CACNA1A-209ENST00000587525 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.22
CACNA1A-209ENST00000587525 PRR36Q9H6K5 1346 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 ISM2Q6H9L7 571 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 ATP8B2P98198 1209 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 SASS6Q6UVJ0 657 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 SDF4Q9BRK5 362 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 MTMR7Q9Y216 660 aa16.39■□□□□ 0.21
CACNA1A-209ENST00000587525 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 LMBRD1Q9NUN5 540 aa16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 HAND2P61296 217 aa16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 STX6O43752 255 aa16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 MCM2P49736 904 aa16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 THEMISQ8N1K5 641 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
CACNA1A-209ENST00000587525 CPLX1O14810 134 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 ZBTB3Q9H5J0 574 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 CCAR2Q8N163 923 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 ABCC4O15439 1325 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 TRPM2O94759 1503 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 ADCY5O95622 1261 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 EVA1CP58658 441 aa16.37■□□□□ 0.21
CACNA1A-209ENST00000587525 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 FAM227BQ96M60 508 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 LIMCH1Q9UPQ0 1083 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 CFAP74Q9C0B2 1584 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 OFD1O75665 1012 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 KIF2CQ99661 725 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 GLRX3O76003 335 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
CACNA1A-209ENST00000587525 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
CACNA1A-209ENST00000587525 RTL1A6NKG5 1358 aa16.35■□□□□ 0.21
CACNA1A-209ENST00000587525 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
CACNA1A-209ENST00000587525 GOLGA6L6A8MZA4 724 aa16.35■□□□□ 0.21
CACNA1A-209ENST00000587525 ME1P48163 572 aa16.35■□□□□ 0.21
CACNA1A-209ENST00000587525 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-209ENST00000587525 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 FAM177A1Q8N128 213 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 NBPF6Q5VWK0 638 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 NBPF4Q96M43 638 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 ORAI2Q96SN7 254 aa16.34■□□□□ 0.21
CACNA1A-209ENST00000587525 KRT85P78386 507 aa16.33■□□□□ 0.21
CACNA1A-209ENST00000587525 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.21
CACNA1A-209ENST00000587525 BIN1O00499 593 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 A0A087WZG4 1122 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 SYT1P21579 422 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 MAP7D2Q96T17 732 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
CACNA1A-209ENST00000587525 HOXC9P31274 260 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 HSP90AA4PQ58FG1 418 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 XAGE3Q8WTP9 111 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 SBNO2Q9Y2G9 1366 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 ERICH4A6NGS2 130 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 GOLIM4O00461 696 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 ZMYM3Q14202 1370 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 A0A087WWV3 80 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 CABP4P57796 275 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 CCDC144CPQ8IYA2 1237 aa16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 C16orf45Q96MC5 204 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 TRMT1Q9NXH9 659 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-209ENST00000587525 DBF4Q9UBU7 674 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms