RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 KDM4AO75164 1064 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
UBE2O-204ENST00000587127 DNM1Q05193 864 aaKnown RBP13.07□□□□□ -0.32
UBE2O-204ENST00000587127 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 MTERF4Q7Z6M4 381 aaKnown RBP13.07□□□□□ -0.32
UBE2O-204ENST00000587127 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
UBE2O-204ENST00000587127 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
UBE2O-204ENST00000587127 TTC14Q96N46 770 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 NEO1Q92859 1461 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
UBE2O-204ENST00000587127 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 RIMS1Q86UR5 1692 aaKnown RBP13.06□□□□□ -0.32
UBE2O-204ENST00000587127 SGSM2O43147 1006 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 UBE2HP62256 183 aa13.06□□□□□ -0.32
UBE2O-204ENST00000587127 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
UBE2O-204ENST00000587127 F13A1P00488 732 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 PI4K2BQ8TCG2 481 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 SMC3Q9UQE7 1217 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 UBTFL1P0CB47 393 aaPredicted RBP13.05□□□□□ -0.32
UBE2O-204ENST00000587127 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
UBE2O-204ENST00000587127 SSH2Q76I76 1423 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 RAD50Q92878 1312 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
UBE2O-204ENST00000587127 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
UBE2O-204ENST00000587127 COL9A3Q14050 684 aaPredicted RBP13.04□□□□□ -0.32
UBE2O-204ENST00000587127 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 PRIMPOLQ96LW4 560 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 EYA1Q99502 592 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 ADCK5Q3MIX3 580 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 LIMCH1Q9UPQ0 1083 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
UBE2O-204ENST00000587127 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
UBE2O-204ENST00000587127 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 PEAK1Q9H792 1746 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 GJB2P29033 226 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 HMGN5P82970 282 aaKnown RBP13.03□□□□□ -0.32
UBE2O-204ENST00000587127 NECAB1Q8N987 351 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
UBE2O-204ENST00000587127 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
UBE2O-204ENST00000587127 C3P01024 1663 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 RICTORQ6R327 1708 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
UBE2O-204ENST00000587127 PTH1RQ03431 593 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 MTMR6Q9Y217 621 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 SRGAP3O43295 1099 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 NBPF7P0C2Y1 421 aaPredicted RBP13.02□□□□□ -0.32
UBE2O-204ENST00000587127 CAMK4Q16566 473 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 FERMT3Q86UX7 667 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 SSH3Q8TE77 659 aa13.02□□□□□ -0.32
UBE2O-204ENST00000587127 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
UBE2O-204ENST00000587127 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
UBE2O-204ENST00000587127 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
UBE2O-204ENST00000587127 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
UBE2O-204ENST00000587127 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
UBE2O-204ENST00000587127 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.33
UBE2O-204ENST00000587127 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.33
UBE2O-204ENST00000587127 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE2O-204ENST00000587127 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
UBE2O-204ENST00000587127 HYPKQ9NX55 129 aa13.01□□□□□ -0.33
UBE2O-204ENST00000587127 EIF2S2P20042 333 aaKnown RBP13.01□□□□□ -0.33
UBE2O-204ENST00000587127 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
UBE2O-204ENST00000587127 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
UBE2O-204ENST00000587127 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
UBE2O-204ENST00000587127 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.01□□□□□ -0.33
UBE2O-204ENST00000587127 ANXA1P04083 346 aa13□□□□□ -0.33
UBE2O-204ENST00000587127 AMPHP49418 695 aa13□□□□□ -0.33
UBE2O-204ENST00000587127 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
UBE2O-204ENST00000587127 IGSF3O75054 1194 aa13□□□□□ -0.33
UBE2O-204ENST00000587127 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
UBE2O-204ENST00000587127 PTGS1P23219 599 aa13□□□□□ -0.33
UBE2O-204ENST00000587127 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
UBE2O-204ENST00000587127 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
UBE2O-204ENST00000587127 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
UBE2O-204ENST00000587127 LIG1P18858 919 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 LUZP1Q86V48 1076 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 LRMPQ12912 555 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 ME3Q16798 604 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 AOX1Q06278 1338 aa12.99□□□□□ -0.33
UBE2O-204ENST00000587127 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
UBE2O-204ENST00000587127 DMTNQ08495 405 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms