RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
DNMT1-211ENST00000586988 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-211ENST00000586988 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
DNMT1-211ENST00000586988 ATP6V1AP38606 617 aa15.1■□□□□ 0.01
DNMT1-211ENST00000586988 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
DNMT1-211ENST00000586988 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
DNMT1-211ENST00000586988 RREB1Q92766 1687 aa15.09■□□□□ 0.01
DNMT1-211ENST00000586988 PRAMEF22A3QJZ6 481 aa15.09■□□□□ 0.01
DNMT1-211ENST00000586988 SLC27A3Q5K4L6 730 aa15.09■□□□□ 0.01
DNMT1-211ENST00000586988 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
DNMT1-211ENST00000586988 CHPF2Q9P2E5 772 aa15.09■□□□□ 0.01
DNMT1-211ENST00000586988 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
DNMT1-211ENST00000586988 BCAR3O75815 825 aa15.08■□□□□ 0
DNMT1-211ENST00000586988 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0
DNMT1-211ENST00000586988 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0
DNMT1-211ENST00000586988 NECTIN2Q92692 538 aa15.08■□□□□ 0
DNMT1-211ENST00000586988 SLC4A9Q96Q91 983 aa15.08■□□□□ 0
DNMT1-211ENST00000586988 DDX21Q9NR30 783 aaKnown RBP eCLIP15.08■□□□□ 0
DNMT1-211ENST00000586988 USP16Q9Y5T5 823 aa15.08■□□□□ 0
DNMT1-211ENST00000586988 TAF1LQ8IZX4 1826 aa15.08■□□□□ 0
DNMT1-211ENST00000586988 PLSCR1O15162 318 aa15.07■□□□□ 0
DNMT1-211ENST00000586988 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
DNMT1-211ENST00000586988 APBA3O96018 575 aa15.07■□□□□ 0
DNMT1-211ENST00000586988 MRPL50Q8N5N7 158 aaKnown RBP15.07■□□□□ 0
DNMT1-211ENST00000586988 HYPKQ9NX55 129 aa15.07■□□□□ 0
DNMT1-211ENST00000586988 PTPRCP08575 1304 aa15.07■□□□□ 0
DNMT1-211ENST00000586988 RNF123Q5XPI4 1314 aa15.07■□□□□ 0
DNMT1-211ENST00000586988 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
DNMT1-211ENST00000586988 SLC4A2P04920 1241 aa15.06■□□□□ 0
DNMT1-211ENST00000586988 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
DNMT1-211ENST00000586988 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
DNMT1-211ENST00000586988 CNTNAP4Q9C0A0 1308 aa15.06■□□□□ 0
DNMT1-211ENST00000586988 C4BP0C0L5 1744 aa15.06■□□□□ 0
DNMT1-211ENST00000586988 MS4A1P11836 297 aa15.05■□□□□ -0
DNMT1-211ENST00000586988 ITPK1Q13572 414 aa15.05■□□□□ -0
DNMT1-211ENST00000586988 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
DNMT1-211ENST00000586988 CCDC125Q86Z20 511 aa15.05■□□□□ -0
DNMT1-211ENST00000586988 ARHGAP45Q92619 1136 aa15.05■□□□□ -0
DNMT1-211ENST00000586988 FRAT1Q92837 279 aaPredicted RBP15.05■□□□□ -0
DNMT1-211ENST00000586988 FLIIQ13045 1269 aa15.04■□□□□ -0
DNMT1-211ENST00000586988 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
DNMT1-211ENST00000586988 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
DNMT1-211ENST00000586988 CCDC87Q9NVE4 849 aa15.04■□□□□ -0
DNMT1-211ENST00000586988 PXDNLA1KZ92 1463 aa15.03■□□□□ -0
DNMT1-211ENST00000586988 NEFLP07196 543 aa15.03■□□□□ -0
DNMT1-211ENST00000586988 CRKLP46109 303 aaKnown RBP15.03■□□□□ -0
DNMT1-211ENST00000586988 BAG6P46379 1132 aa15.03■□□□□ -0
DNMT1-211ENST00000586988 TXNRD1Q16881 649 aa15.03■□□□□ -0
DNMT1-211ENST00000586988 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
DNMT1-211ENST00000586988 NOB1Q9ULX3 412 aaKnown RBP15.03■□□□□ -0
DNMT1-211ENST00000586988 DDX58O95786 925 aaKnown RBP15.02■□□□□ -0
DNMT1-211ENST00000586988 A1BGP04217 495 aa15.02■□□□□ -0
DNMT1-211ENST00000586988 MYL6BP14649 208 aa15.02■□□□□ -0
DNMT1-211ENST00000586988 IL6STP40189 918 aaPredicted RBP15.02■□□□□ -0
DNMT1-211ENST00000586988 FKBP5Q13451 457 aaPredicted RBP15.02■□□□□ -0
DNMT1-211ENST00000586988 PDIA6Q15084 440 aa15.02■□□□□ -0
DNMT1-211ENST00000586988 RC3H1Q5TC82 1133 aaKnown RBP15.02■□□□□ -0
DNMT1-211ENST00000586988 FTSJ3Q8IY81 847 aaKnown RBP15.02■□□□□ -0
DNMT1-211ENST00000586988 LINC00116Q8NCU8 138 aa15.02■□□□□ -0
DNMT1-211ENST00000586988 ZBTB1Q9Y2K1 713 aa15.02■□□□□ -0
DNMT1-211ENST00000586988 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
DNMT1-211ENST00000586988 EP400Q96L91 3159 aa15.02□□□□□ -0.01
DNMT1-211ENST00000586988 PROSER3Q2NL68 480 aa15.01□□□□□ -0.01
DNMT1-211ENST00000586988 NBPF26B4DH59 902 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 ANXA1P04083 346 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 TRIM27P14373 513 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 PDE3AQ14432 1141 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 NBPF14Q5TI25 921 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 NBPF10Q6P3W6 841 aaKnown RBP15□□□□□ -0.01
DNMT1-211ENST00000586988 LRP10Q7Z4F1 713 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 NBPF15Q8N660 670 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 AK7Q96M32 723 aa15□□□□□ -0.01
DNMT1-211ENST00000586988 PHAXQ9H814 394 aaKnown RBP15□□□□□ -0.01
DNMT1-211ENST00000586988 MYH14Q7Z406 1995 aaKnown RBP15□□□□□ -0.01
DNMT1-211ENST00000586988 COL15A1P39059 1388 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 ABCC4O15439 1325 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 ARFGEF2Q9Y6D5 1785 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 PLIN1O60240 522 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 PIP4K2AP48426 406 aaPredicted RBP14.99□□□□□ -0.01
DNMT1-211ENST00000586988 INTS5Q6P9B9 1019 aaKnown RBP14.99□□□□□ -0.01
DNMT1-211ENST00000586988 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 G2E3Q7L622 706 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 DZIP1LQ8IYY4 767 aaKnown RBP14.99□□□□□ -0.01
DNMT1-211ENST00000586988 XAGE3Q8WTP9 111 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 LRRC4BQ9NT99 713 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 NUP188Q5SRE5 1749 aa14.99□□□□□ -0.01
DNMT1-211ENST00000586988 SCN7AQ01118 1682 aa14.98□□□□□ -0.01
DNMT1-211ENST00000586988 A0A087WZG4 1122 aa14.98□□□□□ -0.01
DNMT1-211ENST00000586988 GNPATO15228 680 aa14.98□□□□□ -0.01
DNMT1-211ENST00000586988 KCNQ4P56696 695 aa14.98□□□□□ -0.01
DNMT1-211ENST00000586988 COPS6Q7L5N1 327 aa14.98□□□□□ -0.01
DNMT1-211ENST00000586988 ZNF330Q9Y3S2 320 aaPredicted RBP14.98□□□□□ -0.01
DNMT1-211ENST00000586988 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
DNMT1-211ENST00000586988 UBR3Q6ZT12 1888 aa14.97□□□□□ -0.01
DNMT1-211ENST00000586988 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
DNMT1-211ENST00000586988 AIMP1Q12904 312 aaKnown RBP14.97□□□□□ -0.01
DNMT1-211ENST00000586988 KSR2Q6VAB6 950 aa14.97□□□□□ -0.01
DNMT1-211ENST00000586988 CAMKK2Q96RR4 588 aa14.97□□□□□ -0.01
DNMT1-211ENST00000586988 RTCBQ9Y3I0 505 aaKnown RBP14.97□□□□□ -0.01
DNMT1-211ENST00000586988 ATP10DQ9P241 1426 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms