RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 PNISRQ8TF01 805 aaKnown RBP22.67■■□□□ 1.22
RFX1-202ENST00000586913 DLG5Q8TDM6 1919 aa22.67■■□□□ 1.22
RFX1-202ENST00000586913 NLGN2Q8NFZ4 835 aa22.66■■□□□ 1.22
RFX1-202ENST00000586913 COL15A1P39059 1388 aa22.64■■□□□ 1.22
RFX1-202ENST00000586913 ZPR1O75312 459 aa22.64■■□□□ 1.21
RFX1-202ENST00000586913 SNRPA1P09661 255 aaKnown RBP22.64■■□□□ 1.21
RFX1-202ENST00000586913 EIF5P55010 431 aaKnown RBP22.64■■□□□ 1.21
RFX1-202ENST00000586913 SRP68Q9UHB9 627 aaKnown RBP22.64■■□□□ 1.21
RFX1-202ENST00000586913 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
RFX1-202ENST00000586913 A0A087WZG4 1122 aa22.63■■□□□ 1.21
RFX1-202ENST00000586913 CANXP27824 592 aaKnown RBP22.63■■□□□ 1.21
RFX1-202ENST00000586913 TMPOP42166 694 aaKnown RBP22.63■■□□□ 1.21
RFX1-202ENST00000586913 RIPK4P57078 832 aa22.63■■□□□ 1.21
RFX1-202ENST00000586913 LMOD3Q0VAK6 560 aa22.63■■□□□ 1.21
RFX1-202ENST00000586913 RUNDC1Q96C34 613 aa22.63■■□□□ 1.21
RFX1-202ENST00000586913 IL6STP40189 918 aaPredicted RBP22.62■■□□□ 1.21
RFX1-202ENST00000586913 FKBP8Q14318 412 aa22.62■■□□□ 1.21
RFX1-202ENST00000586913 ADAMTS8Q9UP79 889 aa22.62■■□□□ 1.21
RFX1-202ENST00000586913 GPR162Q16538 588 aa22.61■■□□□ 1.21
RFX1-202ENST00000586913 PARP3Q9Y6F1 533 aa22.61■■□□□ 1.21
RFX1-202ENST00000586913 TM4SF1P30408 202 aa22.6■■□□□ 1.21
RFX1-202ENST00000586913 USPL1Q5W0Q7 1092 aa22.6■■□□□ 1.21
RFX1-202ENST00000586913 BABAM1Q9NWV8 329 aa22.6■■□□□ 1.21
RFX1-202ENST00000586913 USP16Q9Y5T5 823 aa22.6■■□□□ 1.21
RFX1-202ENST00000586913 A1BGP04217 495 aa22.59■■□□□ 1.21
RFX1-202ENST00000586913 THUMPD2Q9BTF0 503 aaKnown RBP22.59■■□□□ 1.21
RFX1-202ENST00000586913 CCDC146Q8IYE0 955 aa22.58■■□□□ 1.21
RFX1-202ENST00000586913 MIS18AQ9NYP9 233 aa22.58■■□□□ 1.21
RFX1-202ENST00000586913 C10orf71Q711Q0 1435 aa22.57■■□□□ 1.2
RFX1-202ENST00000586913 TGFB2P61812 414 aa22.57■■□□□ 1.2
RFX1-202ENST00000586913 BCL2L12Q9HB09 334 aa22.57■■□□□ 1.2
RFX1-202ENST00000586913 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
RFX1-202ENST00000586913 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
RFX1-202ENST00000586913 EIF4A1P60842 406 aaKnown RBP22.56■■□□□ 1.2
RFX1-202ENST00000586913 DDR1Q08345 913 aa22.56■■□□□ 1.2
RFX1-202ENST00000586913 KIF13BQ9NQT8 1826 aa22.56■■□□□ 1.2
RFX1-202ENST00000586913 GRIN3BO60391 1043 aa22.55■■□□□ 1.2
RFX1-202ENST00000586913 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
RFX1-202ENST00000586913 POLRMTO00411 1230 aaKnown RBP22.54■■□□□ 1.2
RFX1-202ENST00000586913 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
RFX1-202ENST00000586913 YY1P25490 414 aa22.54■■□□□ 1.2
RFX1-202ENST00000586913 ANP32CO43423 234 aa22.53■■□□□ 1.2
RFX1-202ENST00000586913 YBX3P16989 372 aaKnown RBP eCLIP22.53■■□□□ 1.2
RFX1-202ENST00000586913 NFIXQ14938 502 aa22.53■■□□□ 1.2
RFX1-202ENST00000586913 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
RFX1-202ENST00000586913 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
RFX1-202ENST00000586913 TSPYL4Q9UJ04 414 aa22.52■■□□□ 1.2
RFX1-202ENST00000586913 TRIM35Q9UPQ4 493 aa22.52■■□□□ 1.2
RFX1-202ENST00000586913 RGL2O15211 777 aa22.51■■□□□ 1.19
RFX1-202ENST00000586913 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
RFX1-202ENST00000586913 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
RFX1-202ENST00000586913 ZNF330Q9Y3S2 320 aaPredicted RBP22.51■■□□□ 1.19
RFX1-202ENST00000586913 PXDNLA1KZ92 1463 aa22.51■■□□□ 1.19
RFX1-202ENST00000586913 NBPF26B4DH59 902 aa22.5■■□□□ 1.19
RFX1-202ENST00000586913 CAMTA2O94983 1202 aa22.5■■□□□ 1.19
RFX1-202ENST00000586913 NBPF10Q6P3W6 841 aaKnown RBP22.5■■□□□ 1.19
RFX1-202ENST00000586913 NBPF15Q8N660 670 aa22.5■■□□□ 1.19
RFX1-202ENST00000586913 DZIP3Q86Y13 1208 aaKnown RBP22.49■■□□□ 1.19
RFX1-202ENST00000586913 SCN7AQ01118 1682 aa22.49■■□□□ 1.19
RFX1-202ENST00000586913 LAMB4A4D0S4 1761 aa22.48■■□□□ 1.19
RFX1-202ENST00000586913 CHL1O00533 1208 aa22.48■■□□□ 1.19
RFX1-202ENST00000586913 CCDC184Q52MB2 194 aa22.48■■□□□ 1.19
RFX1-202ENST00000586913 CLEC4GQ6UXB4 293 aa22.48■■□□□ 1.19
RFX1-202ENST00000586913 KIAA1551Q9HCM1 1747 aa22.48■■□□□ 1.19
RFX1-202ENST00000586913 CHD4Q14839 1912 aa22.47■■□□□ 1.19
RFX1-202ENST00000586913 SERPINB2P05120 415 aa22.47■■□□□ 1.19
RFX1-202ENST00000586913 NRXN2Q9P2S2 1712 aa22.47■■□□□ 1.19
RFX1-202ENST00000586913 ERBB4Q15303 1308 aa22.47■■□□□ 1.19
RFX1-202ENST00000586913 APAF1O14727 1248 aa22.46■■□□□ 1.19
RFX1-202ENST00000586913 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
RFX1-202ENST00000586913 TBC1D9BQ66K14 1250 aa22.46■■□□□ 1.19
RFX1-202ENST00000586913 UTRNP46939 3433 aa22.45■■□□□ 1.18
RFX1-202ENST00000586913 A0A0G2JLW4 131 aa22.45■■□□□ 1.18
RFX1-202ENST00000586913 DPEP1P16444 411 aa22.45■■□□□ 1.18
RFX1-202ENST00000586913 ZNF652Q9Y2D9 606 aa22.44■■□□□ 1.18
RFX1-202ENST00000586913 CARMIL3Q8ND23 1372 aa22.43■■□□□ 1.18
RFX1-202ENST00000586913 KCNA3P22001 575 aa22.43■■□□□ 1.18
RFX1-202ENST00000586913 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
RFX1-202ENST00000586913 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
RFX1-202ENST00000586913 MRS2Q9HD23 443 aa22.43■■□□□ 1.18
RFX1-202ENST00000586913 BCORQ6W2J9 1755 aa22.43■■□□□ 1.18
RFX1-202ENST00000586913 CALD1Q05682 793 aaKnown RBP22.42■■□□□ 1.18
RFX1-202ENST00000586913 BICDL1Q6ZP65 573 aa22.42■■□□□ 1.18
RFX1-202ENST00000586913 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
RFX1-202ENST00000586913 N4BP2Q86UW6 1770 aaPredicted RBP22.41■■□□□ 1.18
RFX1-202ENST00000586913 PIM2Q9P1W9 311 aa22.41■■□□□ 1.18
RFX1-202ENST00000586913 ERVV-1B6SEH8 477 aa22.4■■□□□ 1.18
RFX1-202ENST00000586913 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
RFX1-202ENST00000586913 HOXB7P09629 217 aa22.39■■□□□ 1.17
RFX1-202ENST00000586913 ZNF853P0CG23 659 aa22.39■■□□□ 1.17
RFX1-202ENST00000586913 PDZRN3Q9UPQ7 1066 aa22.39■■□□□ 1.17
RFX1-202ENST00000586913 BCS1LQ9Y276 419 aa22.39■■□□□ 1.17
RFX1-202ENST00000586913 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.17
RFX1-202ENST00000586913 BRCA1P38398 1863 aaKnown RBP22.39■■□□□ 1.17
RFX1-202ENST00000586913 PRR5LQ6MZQ0 368 aa22.38■■□□□ 1.17
RFX1-202ENST00000586913 BRIP1Q9BX63 1249 aa22.38■■□□□ 1.17
RFX1-202ENST00000586913 IFT57Q9NWB7 429 aa22.38■■□□□ 1.17
RFX1-202ENST00000586913 WWC3Q9ULE0 1092 aa22.38■■□□□ 1.17
RFX1-202ENST00000586913 CHRNA5P30532 468 aa22.37■■□□□ 1.17
RFX1-202ENST00000586913 GNAI1P63096 354 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms