RNA–Protein interactions for RNA: ENST00000586728.5

CDIP1-210, Transcript of cell death inducing p53 target 1, human

TSL 5

Gene CDIP1, Length 756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDIP1-210	ENST00000586728	ITGBL1	O95965	494 aa	Predicted RBP	13.96	□□□□□ -0.17
CDIP1-210	ENST00000586728	SCN4A	P35499	1836 aa		13.96	□□□□□ -0.17
CDIP1-210	ENST00000586728	THSD7B	Q9C0I4	1608 aa		13.96	□□□□□ -0.17
CDIP1-210	ENST00000586728	ERVV-2	B6SEH9	535 aa		13.95	□□□□□ -0.18
CDIP1-210	ENST00000586728	DPY19L2	Q6NUT2	758 aa		13.95	□□□□□ -0.18
CDIP1-210	ENST00000586728	TESK2	Q96S53	571 aa		13.95	□□□□□ -0.18
CDIP1-210	ENST00000586728	ADAMTSL1	Q8N6G6	1762 aa		13.95	□□□□□ -0.18
CDIP1-210	ENST00000586728	TTLL6	Q8N841	843 aa		13.94	□□□□□ -0.18
CDIP1-210	ENST00000586728	EYA1	Q99502	592 aa		13.94	□□□□□ -0.18
CDIP1-210	ENST00000586728	RBM42	Q9BTD8	480 aa	Known RBP	13.94	□□□□□ -0.18
CDIP1-210	ENST00000586728	ANKRD31	Q8N7Z5	1873 aa		13.93	□□□□□ -0.18
CDIP1-210	ENST00000586728	RASSF10	A6NK89	507 aa		13.93	□□□□□ -0.18
CDIP1-210	ENST00000586728	CRKL	P46109	303 aa	Known RBP	13.93	□□□□□ -0.18
CDIP1-210	ENST00000586728	SIN3A	Q96ST3	1273 aa		13.93	□□□□□ -0.18
CDIP1-210	ENST00000586728	CARD11	Q9BXL7	1154 aa		13.93	□□□□□ -0.18
CDIP1-210	ENST00000586728	TMEM88B	A6NKF7	163 aa		13.92	□□□□□ -0.18
CDIP1-210	ENST00000586728	INTS5	Q6P9B9	1019 aa	Known RBP	13.92	□□□□□ -0.18
CDIP1-210	ENST00000586728	EMILIN1	Q9Y6C2	1016 aa		13.92	□□□□□ -0.18
CDIP1-210	ENST00000586728	LDHD	Q86WU2	507 aa		13.91	□□□□□ -0.18
CDIP1-210	ENST00000586728	WASHC2A	Q641Q2	1341 aa		13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	LTBP3	Q9NS15	1303 aa		13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	CCDC85C	A6NKD9	419 aa		13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	DDN	O94850	711 aa	Predicted RBP	13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	NFIX	Q14938	502 aa		13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	CARMIL3	Q8ND23	1372 aa		13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	COL11A2	P13942	1736 aa	Predicted RBP	13.9	□□□□□ -0.18
CDIP1-210	ENST00000586728	MAP2K1	Q02750	393 aa	Predicted RBP	13.89	□□□□□ -0.19
CDIP1-210	ENST00000586728	ERFE	Q4G0M1	354 aa		13.89	□□□□□ -0.19
CDIP1-210	ENST00000586728	USPL1	Q5W0Q7	1092 aa		13.88	□□□□□ -0.19
CDIP1-210	ENST00000586728	C2CD5	Q86YS7	1000 aa		13.88	□□□□□ -0.19
CDIP1-210	ENST00000586728	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.88	□□□□□ -0.19
CDIP1-210	ENST00000586728	BCL2L12	Q9HB09	334 aa		13.88	□□□□□ -0.19
CDIP1-210	ENST00000586728	SOS1	Q07889	1333 aa	Predicted RBP	13.88	□□□□□ -0.19
CDIP1-210	ENST00000586728	WDR33	Q9C0J8	1336 aa	Known RBP	13.88	□□□□□ -0.19
CDIP1-210	ENST00000586728	DEFB115	Q30KQ5	88 aa		13.87	□□□□□ -0.19
CDIP1-210	ENST00000586728	LTBP1	Q14766	1721 aa		13.87	□□□□□ -0.19
CDIP1-210	ENST00000586728	ARFGEF2	Q9Y6D5	1785 aa		13.86	□□□□□ -0.19
CDIP1-210	ENST00000586728	SLX4	Q8IY92	1834 aa		13.86	□□□□□ -0.19
CDIP1-210	ENST00000586728		H0YIN7	160 aa		13.86	□□□□□ -0.19
CDIP1-210	ENST00000586728	SERPINB2	P05120	415 aa		13.86	□□□□□ -0.19
CDIP1-210	ENST00000586728	NARF	Q9UHQ1	456 aa		13.86	□□□□□ -0.19
CDIP1-210	ENST00000586728	CASP8AP2	Q9UKL3	1982 aa		13.85	□□□□□ -0.19
CDIP1-210	ENST00000586728	IQCA1L	A6NCM1	817 aa		13.85	□□□□□ -0.19
CDIP1-210	ENST00000586728	PTCD1	O75127	700 aa	Known RBP	13.85	□□□□□ -0.19
CDIP1-210	ENST00000586728	C21orf2	O43822	256 aa		13.84	□□□□□ -0.19
CDIP1-210	ENST00000586728	ZPR1	O75312	459 aa		13.84	□□□□□ -0.19
CDIP1-210	ENST00000586728	HSP90AB1	P08238	724 aa	Known RBP	13.84	□□□□□ -0.19
CDIP1-210	ENST00000586728	SCN11A	Q9UI33	1791 aa		13.83	□□□□□ -0.19
CDIP1-210	ENST00000586728	CACNA1S	Q13698	1873 aa		13.83	□□□□□ -0.2
CDIP1-210	ENST00000586728	ST20-MTHFS	A0A0A6YYL1	179 aa		13.83	□□□□□ -0.2
CDIP1-210	ENST00000586728	CABP4	P57796	275 aa		13.82	□□□□□ -0.2
CDIP1-210	ENST00000586728	CARD14	Q9BXL6	1004 aa		13.82	□□□□□ -0.2
CDIP1-210	ENST00000586728	TAOK3	Q9H2K8	898 aa		13.82	□□□□□ -0.2
CDIP1-210	ENST00000586728	SLC24A1	O60721	1099 aa		13.81	□□□□□ -0.2
CDIP1-210	ENST00000586728	EIF4A2	Q14240	407 aa	Known RBP	13.81	□□□□□ -0.2
CDIP1-210	ENST00000586728	NFATC2IP	Q8NCF5	419 aa		13.81	□□□□□ -0.2
CDIP1-210	ENST00000586728	MCOLN1	Q9GZU1	580 aa		13.81	□□□□□ -0.2
CDIP1-210	ENST00000586728	PDZRN3	Q9UPQ7	1066 aa		13.81	□□□□□ -0.2
CDIP1-210	ENST00000586728	COL15A1	P39059	1388 aa		13.81	□□□□□ -0.2
CDIP1-210	ENST00000586728	TRPM7	Q96QT4	1865 aa		13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	CYP19A1	P11511	503 aa	Predicted RBP	13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	NEUROD1	Q13562	356 aa		13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	DNAJC10	Q8IXB1	793 aa		13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	CNTROB	Q8N137	903 aa		13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	BRIP1	Q9BX63	1249 aa		13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	POLK	Q9UBT6	870 aa		13.8	□□□□□ -0.2
CDIP1-210	ENST00000586728	PPM1G	O15355	546 aa	Predicted RBP	13.79	□□□□□ -0.2
CDIP1-210	ENST00000586728	C7orf43	Q8WVR3	580 aa		13.79	□□□□□ -0.2
CDIP1-210	ENST00000586728	EPHX2	P34913	555 aa		13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	MAP1S	Q66K74	1059 aa	Predicted RBP	13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	CAPNS2	Q96L46	248 aa		13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	HACL1	Q9UJ83	578 aa		13.78	□□□□□ -0.2
CDIP1-210	ENST00000586728	PDE6B	P35913	854 aa		13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	MTHFS	P49914	203 aa		13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	SCN7A	Q01118	1682 aa		13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	EAPP	Q56P03	285 aa	Predicted RBP	13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	PNMA8A	Q86V59	439 aa	Predicted RBP	13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	GPR101	Q96P66	508 aa	Predicted RBP	13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	ZNF541	Q9H0D2	1346 aa		13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	ZBTB1	Q9Y2K1	713 aa		13.77	□□□□□ -0.21
CDIP1-210	ENST00000586728	AMOT	Q4VCS5	1084 aa		13.76	□□□□□ -0.21
CDIP1-210	ENST00000586728	PRR5L	Q6MZQ0	368 aa		13.76	□□□□□ -0.21
CDIP1-210	ENST00000586728	ABT1	Q9ULW3	272 aa	Known RBP	13.76	□□□□□ -0.21
CDIP1-210	ENST00000586728	UBR2	Q8IWV8	1755 aa		13.76	□□□□□ -0.21
CDIP1-210	ENST00000586728	MRC1	P22897	1456 aa		13.75	□□□□□ -0.21
CDIP1-210	ENST00000586728	MAP2K2	P36507	400 aa		13.75	□□□□□ -0.21
CDIP1-210	ENST00000586728	STYK1	Q6J9G0	422 aa		13.75	□□□□□ -0.21
CDIP1-210	ENST00000586728	CYP4F22	Q6NT55	531 aa		13.75	□□□□□ -0.21
CDIP1-210	ENST00000586728	PRPF40B	Q6NWY9	871 aa	Known RBP	13.75	□□□□□ -0.21
CDIP1-210	ENST00000586728	TSKS	Q9UJT2	592 aa		13.75	□□□□□ -0.21
CDIP1-210	ENST00000586728	SRGN	P10124	158 aa		13.74	□□□□□ -0.21
CDIP1-210	ENST00000586728	ECE1	P42892	770 aa		13.74	□□□□□ -0.21
CDIP1-210	ENST00000586728	SOGA3	Q5TF21	947 aa		13.74	□□□□□ -0.21
CDIP1-210	ENST00000586728	PRPF38B	Q5VTL8	546 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms