RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 C1orf141Q5JVX7 400 aa17.25■□□□□ 0.35
CNN1-205ENST00000586577 RC3H1Q5TC82 1133 aaKnown RBP17.25■□□□□ 0.35
CNN1-205ENST00000586577 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
CNN1-205ENST00000586577 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
CNN1-205ENST00000586577 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
CNN1-205ENST00000586577 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
CNN1-205ENST00000586577 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
CNN1-205ENST00000586577 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
CNN1-205ENST00000586577 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
CNN1-205ENST00000586577 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
CNN1-205ENST00000586577 SBF1O95248 1867 aa17.23■□□□□ 0.35
CNN1-205ENST00000586577 VEGFAP15692 232 aaPredicted RBP17.23■□□□□ 0.35
CNN1-205ENST00000586577 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
CNN1-205ENST00000586577 NFATC2IPQ8NCF5 419 aa17.23■□□□□ 0.35
CNN1-205ENST00000586577 TJP1Q07157 1748 aa17.22■□□□□ 0.35
CNN1-205ENST00000586577 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
CNN1-205ENST00000586577 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
CNN1-205ENST00000586577 CABP4P57796 275 aa17.22■□□□□ 0.35
CNN1-205ENST00000586577 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.35
CNN1-205ENST00000586577 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
CNN1-205ENST00000586577 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
CNN1-205ENST00000586577 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
CNN1-205ENST00000586577 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
CNN1-205ENST00000586577 MYH14Q7Z406 1995 aaKnown RBP17.19■□□□□ 0.34
CNN1-205ENST00000586577 RALBP1Q15311 655 aa17.19■□□□□ 0.34
CNN1-205ENST00000586577 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
CNN1-205ENST00000586577 NUDCQ9Y266 331 aa17.19■□□□□ 0.34
CNN1-205ENST00000586577 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
CNN1-205ENST00000586577 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
CNN1-205ENST00000586577 SLC34A2O95436 690 aa17.18■□□□□ 0.34
CNN1-205ENST00000586577 LMNB1P20700 586 aa17.18■□□□□ 0.34
CNN1-205ENST00000586577 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
CNN1-205ENST00000586577 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
CNN1-205ENST00000586577 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
CNN1-205ENST00000586577 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
CNN1-205ENST00000586577 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
CNN1-205ENST00000586577 CHRNA5P30532 468 aa17.15■□□□□ 0.34
CNN1-205ENST00000586577 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
CNN1-205ENST00000586577 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
CNN1-205ENST00000586577 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
CNN1-205ENST00000586577 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
CNN1-205ENST00000586577 PRKRIP1Q9H875 184 aaPredicted RBP17.14■□□□□ 0.33
CNN1-205ENST00000586577 CREBZFQ9NS37 354 aa17.14■□□□□ 0.33
CNN1-205ENST00000586577 RASSF7Q02833 373 aa17.13■□□□□ 0.33
CNN1-205ENST00000586577 FKBP8Q14318 412 aa17.13■□□□□ 0.33
CNN1-205ENST00000586577 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
CNN1-205ENST00000586577 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
CNN1-205ENST00000586577 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
CNN1-205ENST00000586577 DDR1Q08345 913 aa17.12■□□□□ 0.33
CNN1-205ENST00000586577 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
CNN1-205ENST00000586577 ZPR1O75312 459 aa17.11■□□□□ 0.33
CNN1-205ENST00000586577 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
CNN1-205ENST00000586577 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
CNN1-205ENST00000586577 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
CNN1-205ENST00000586577 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
CNN1-205ENST00000586577 MCM10Q7L590 875 aa17.1■□□□□ 0.33
CNN1-205ENST00000586577 TTLL6Q8N841 843 aa17.1■□□□□ 0.33
CNN1-205ENST00000586577 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
CNN1-205ENST00000586577 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
CNN1-205ENST00000586577 KCNQ3O43525 872 aa17.09■□□□□ 0.33
CNN1-205ENST00000586577 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
CNN1-205ENST00000586577 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.32
CNN1-205ENST00000586577 TM4SF1P30408 202 aa17.08■□□□□ 0.32
CNN1-205ENST00000586577 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.32
CNN1-205ENST00000586577 PCDH10Q9P2E7 1040 aa17.08■□□□□ 0.32
CNN1-205ENST00000586577 FOXN1O15353 648 aa17.07■□□□□ 0.32
CNN1-205ENST00000586577 TEFQ10587 303 aa17.07■□□□□ 0.32
CNN1-205ENST00000586577 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
CNN1-205ENST00000586577 INTS5Q6P9B9 1019 aaKnown RBP17.07■□□□□ 0.32
CNN1-205ENST00000586577 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
CNN1-205ENST00000586577 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
CNN1-205ENST00000586577 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
CNN1-205ENST00000586577 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
CNN1-205ENST00000586577 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
CNN1-205ENST00000586577 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
CNN1-205ENST00000586577 CNTNAP1P78357 1384 aa17.04■□□□□ 0.32
CNN1-205ENST00000586577 POTECB2RU33 542 aa17.04■□□□□ 0.32
CNN1-205ENST00000586577 H0YIN7 160 aa17.04■□□□□ 0.32
CNN1-205ENST00000586577 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
CNN1-205ENST00000586577 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
CNN1-205ENST00000586577 DLEC1Q9Y238 1755 aa17.04■□□□□ 0.32
CNN1-205ENST00000586577 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
CNN1-205ENST00000586577 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
CNN1-205ENST00000586577 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
CNN1-205ENST00000586577 BTBD11A6QL63 1104 aa17.02■□□□□ 0.32
CNN1-205ENST00000586577 HTATSF1O43719 755 aaKnown RBP17.02■□□□□ 0.32
CNN1-205ENST00000586577 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
CNN1-205ENST00000586577 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
CNN1-205ENST00000586577 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
CNN1-205ENST00000586577 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.32
CNN1-205ENST00000586577 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.31
CNN1-205ENST00000586577 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.31
CNN1-205ENST00000586577 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
CNN1-205ENST00000586577 NFKBIEO00221 500 aa17.01■□□□□ 0.31
CNN1-205ENST00000586577 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
CNN1-205ENST00000586577 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
CNN1-205ENST00000586577 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
CNN1-205ENST00000586577 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
CNN1-205ENST00000586577 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
CNN1-205ENST00000586577 MAPK8IP3Q9UPT6 1336 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms