RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 GYS1P13807 737 aa13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 DCTN1Q14203 1278 aa13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
SMARCA4-209ENST00000586122 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 LAMB4A4D0S4 1761 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 ANP32CO43423 234 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 ZPR1O75312 459 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 MMP10P09238 476 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 RIPK4P57078 832 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
SMARCA4-209ENST00000586122 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-209ENST00000586122 ADAMTS8Q9UP79 889 aa13.68□□□□□ -0.22
SMARCA4-209ENST00000586122 CHD4Q14839 1912 aa13.67□□□□□ -0.22
SMARCA4-209ENST00000586122 KCNQ3O43525 872 aa13.67□□□□□ -0.22
SMARCA4-209ENST00000586122 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
SMARCA4-209ENST00000586122 CANXP27824 592 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-209ENST00000586122 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
SMARCA4-209ENST00000586122 RGL2O15211 777 aa13.65□□□□□ -0.22
SMARCA4-209ENST00000586122 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
SMARCA4-209ENST00000586122 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 FKBP8Q14318 412 aa13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 GPR162Q16538 588 aa13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 USPL1Q5W0Q7 1092 aa13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 NLGN2Q8NFZ4 835 aa13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-209ENST00000586122 BCORQ6W2J9 1755 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 GRIN3BO60391 1043 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 TM4SF1P30408 202 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 EIF4A1P60842 406 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 TGFB2P61812 414 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
SMARCA4-209ENST00000586122 GIGYF1O75420 1035 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-209ENST00000586122 A1BGP04217 495 aa13.62□□□□□ -0.23
SMARCA4-209ENST00000586122 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-209ENST00000586122 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
SMARCA4-209ENST00000586122 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 DDR1Q08345 913 aa13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 NEUROD2Q15784 382 aa13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 AFDNP55196 1824 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 KIAA1551Q9HCM1 1747 aa13.61□□□□□ -0.23
SMARCA4-209ENST00000586122 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 NFIXQ14938 502 aa13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 BCL2L12Q9HB09 334 aa13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 PXDNLA1KZ92 1463 aa13.6□□□□□ -0.23
SMARCA4-209ENST00000586122 BRCA1P38398 1863 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-209ENST00000586122 PRAMEF22A3QJZ6 481 aa13.59□□□□□ -0.23
SMARCA4-209ENST00000586122 CHL1O00533 1208 aa13.59□□□□□ -0.23
SMARCA4-209ENST00000586122 APAF1O14727 1248 aa13.59□□□□□ -0.23
SMARCA4-209ENST00000586122 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-209ENST00000586122 TBC1D2BQ9UPU7 963 aa13.59□□□□□ -0.23
SMARCA4-209ENST00000586122 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.23
SMARCA4-209ENST00000586122 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.23
SMARCA4-209ENST00000586122 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 CAMTA2O94983 1202 aa13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 YY1P25490 414 aa13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
SMARCA4-209ENST00000586122 SERPINB2P05120 415 aa13.57□□□□□ -0.24
SMARCA4-209ENST00000586122 HOXB7P09629 217 aa13.57□□□□□ -0.24
SMARCA4-209ENST00000586122 ARFGEF1Q9Y6D6 1849 aa13.56□□□□□ -0.24
SMARCA4-209ENST00000586122 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.244e-7■□□□□ 11.1
SMARCA4-209ENST00000586122 GNAI1P63096 354 aa13.56□□□□□ -0.24
SMARCA4-209ENST00000586122 CCDC27Q2M243 656 aa13.56□□□□□ -0.24
SMARCA4-209ENST00000586122 CCDC184Q52MB2 194 aa13.56□□□□□ -0.24
SMARCA4-209ENST00000586122 SETDB2Q96T68 719 aa13.56□□□□□ -0.24
SMARCA4-209ENST00000586122 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
SMARCA4-209ENST00000586122 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
SMARCA4-209ENST00000586122 ERVV-1B6SEH8 477 aa13.55□□□□□ -0.24
SMARCA4-209ENST00000586122 TBC1D9BQ66K14 1250 aa13.55□□□□□ -0.24
SMARCA4-209ENST00000586122 CHMP4AQ9BY43 222 aa13.55□□□□□ -0.24
SMARCA4-209ENST00000586122 NUP98P52948 1817 aa13.55□□□□□ -0.24
SMARCA4-209ENST00000586122 ZNF853P0CG23 659 aa13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 DPEP1P16444 411 aa13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 PIP4K2AP48426 406 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 LAS1LQ9Y4W2 734 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-209ENST00000586122 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms