RNA–Protein interactions for RNA: ENST00000585951.1

CTDP1-203, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 3

Gene CTDP1, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-203ENST00000585951 KDM3BQ7LBC6 1761 aa26■■□□□ 1.75
CTDP1-203ENST00000585951 NLGN1Q8N2Q7 840 aa25.99■■□□□ 1.75
CTDP1-203ENST00000585951 ANP32CO43423 234 aa25.98■■□□□ 1.75
CTDP1-203ENST00000585951 GYS1P13807 737 aa25.98■■□□□ 1.75
CTDP1-203ENST00000585951 KLHL34Q8N239 644 aa25.98■■□□□ 1.75
CTDP1-203ENST00000585951 PNISRQ8TF01 805 aaKnown RBP25.98■■□□□ 1.75
CTDP1-203ENST00000585951 USP42Q9H9J4 1324 aaKnown RBP25.97■■□□□ 1.75
CTDP1-203ENST00000585951 LMOD3Q0VAK6 560 aa25.96■■□□□ 1.75
CTDP1-203ENST00000585951 CCDC184Q52MB2 194 aa25.96■■□□□ 1.75
CTDP1-203ENST00000585951 MIS18AQ9NYP9 233 aa25.96■■□□□ 1.75
CTDP1-203ENST00000585951 COL15A1P39059 1388 aa25.95■■□□□ 1.75
CTDP1-203ENST00000585951 SNRPA1P09661 255 aaKnown RBP25.95■■□□□ 1.74
CTDP1-203ENST00000585951 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.74
CTDP1-203ENST00000585951 RRP7AQ9Y3A4 280 aaKnown RBP25.95■■□□□ 1.74
CTDP1-203ENST00000585951 MMP10P09238 476 aa25.94■■□□□ 1.74
CTDP1-203ENST00000585951 CANXP27824 592 aaKnown RBP25.94■■□□□ 1.74
CTDP1-203ENST00000585951 EIF5P55010 431 aaKnown RBP25.93■■□□□ 1.74
CTDP1-203ENST00000585951 CD2APQ9Y5K6 639 aa25.93■■□□□ 1.74
CTDP1-203ENST00000585951 USP16Q9Y5T5 823 aa25.93■■□□□ 1.74
CTDP1-203ENST00000585951 PRAMEF22A3QJZ6 481 aa25.92■■□□□ 1.74
CTDP1-203ENST00000585951 NLGN2Q8NFZ4 835 aa25.92■■□□□ 1.74
CTDP1-203ENST00000585951 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
CTDP1-203ENST00000585951 ZPR1O75312 459 aa25.91■■□□□ 1.74
CTDP1-203ENST00000585951 NEUROD2Q15784 382 aa25.91■■□□□ 1.74
CTDP1-203ENST00000585951 NARFQ9UHQ1 456 aa25.91■■□□□ 1.74
CTDP1-203ENST00000585951 LAMB4A4D0S4 1761 aa25.9■■□□□ 1.74
CTDP1-203ENST00000585951 A1BGP04217 495 aa25.9■■□□□ 1.74
CTDP1-203ENST00000585951 IL6STP40189 918 aaPredicted RBP25.9■■□□□ 1.74
CTDP1-203ENST00000585951 FKBP8Q14318 412 aa25.9■■□□□ 1.74
CTDP1-203ENST00000585951 TRIM35Q9UPQ4 493 aa25.9■■□□□ 1.74
CTDP1-203ENST00000585951 UTRNP46939 3433 aa25.89■■□□□ 1.74
CTDP1-203ENST00000585951 USPL1Q5W0Q7 1092 aa25.89■■□□□ 1.74
CTDP1-203ENST00000585951 KIF13BQ9NQT8 1826 aa25.88■■□□□ 1.73
CTDP1-203ENST00000585951 EIF4A1P60842 406 aaKnown RBP25.88■■□□□ 1.73
CTDP1-203ENST00000585951 BABAM1Q9NWV8 329 aa25.88■■□□□ 1.73
CTDP1-203ENST00000585951 A0A087WZG4 1122 aa25.87■■□□□ 1.73
CTDP1-203ENST00000585951 TSPYL4Q9UJ04 414 aa25.87■■□□□ 1.73
CTDP1-203ENST00000585951 GIGYF1O75420 1035 aaPredicted RBP25.86■■□□□ 1.73
CTDP1-203ENST00000585951 MRS2Q9HD23 443 aa25.86■■□□□ 1.73
CTDP1-203ENST00000585951 PARP3Q9Y6F1 533 aa25.86■■□□□ 1.73
CTDP1-203ENST00000585951 APAF1O14727 1248 aa25.85■■□□□ 1.73
CTDP1-203ENST00000585951 BCL2L12Q9HB09 334 aa25.85■■□□□ 1.73
CTDP1-203ENST00000585951 GOLGB1Q14789 3259 aaKnown RBP25.84■■□□□ 1.73
CTDP1-203ENST00000585951 SCN7AQ01118 1682 aa25.84■■□□□ 1.73
CTDP1-203ENST00000585951 TM4SF1P30408 202 aa25.84■■□□□ 1.73
CTDP1-203ENST00000585951 ZNF330Q9Y3S2 320 aaPredicted RBP25.84■■□□□ 1.73
CTDP1-203ENST00000585951 DDR1Q08345 913 aa25.83■■□□□ 1.73
CTDP1-203ENST00000585951 C10orf71Q711Q0 1435 aa25.82■■□□□ 1.72
CTDP1-203ENST00000585951 PIP4K2AP48426 406 aaPredicted RBP25.82■■□□□ 1.72
CTDP1-203ENST00000585951 NBPF26B4DH59 902 aa25.81■■□□□ 1.72
CTDP1-203ENST00000585951 POLRMTO00411 1230 aaKnown RBP25.81■■□□□ 1.72
CTDP1-203ENST00000585951 NBPF10Q6P3W6 841 aaKnown RBP25.81■■□□□ 1.72
CTDP1-203ENST00000585951 NPM2Q86SE8 214 aaKnown RBP25.81■■□□□ 1.72
CTDP1-203ENST00000585951 NBPF15Q8N660 670 aa25.81■■□□□ 1.72
CTDP1-203ENST00000585951 TBC1D2BQ9UPU7 963 aa25.81■■□□□ 1.72
CTDP1-203ENST00000585951 BCORQ6W2J9 1755 aa25.8■■□□□ 1.72
CTDP1-203ENST00000585951 AFDNP55196 1824 aaKnown RBP25.8■■□□□ 1.72
CTDP1-203ENST00000585951 CHL1O00533 1208 aa25.8■■□□□ 1.72
CTDP1-203ENST00000585951 NFIXQ14938 502 aa25.8■■□□□ 1.72
CTDP1-203ENST00000585951 KIAA1551Q9HCM1 1747 aa25.8■■□□□ 1.72
CTDP1-203ENST00000585951 GPR162Q16538 588 aa25.79■■□□□ 1.72
CTDP1-203ENST00000585951 NRXN2Q9P2S2 1712 aa25.78■■□□□ 1.72
CTDP1-203ENST00000585951 DZIP3Q86Y13 1208 aaKnown RBP25.78■■□□□ 1.72
CTDP1-203ENST00000585951 CHD4Q14839 1912 aa25.77■■□□□ 1.72
CTDP1-203ENST00000585951 CAMTA2O94983 1202 aa25.77■■□□□ 1.72
CTDP1-203ENST00000585951 N4BP2Q86UW6 1770 aaPredicted RBP25.77■■□□□ 1.72
CTDP1-203ENST00000585951 TGFB2P61812 414 aa25.76■■□□□ 1.71
CTDP1-203ENST00000585951 PXDNLA1KZ92 1463 aa25.76■■□□□ 1.71
CTDP1-203ENST00000585951 YBX3P16989 372 aaKnown RBP eCLIP25.75■■□□□ 1.71
CTDP1-203ENST00000585951 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
CTDP1-203ENST00000585951 CFAP44Q96MT7 982 aa25.75■■□□□ 1.71
CTDP1-203ENST00000585951 LAS1LQ9Y4W2 734 aaKnown RBP25.75■■□□□ 1.71
CTDP1-203ENST00000585951 TBC1D9BQ66K14 1250 aa25.74■■□□□ 1.71
CTDP1-203ENST00000585951 ERBB4Q15303 1308 aa25.73■■□□□ 1.71
CTDP1-203ENST00000585951 SERPINB2P05120 415 aa25.72■■□□□ 1.71
CTDP1-203ENST00000585951 ZNF853P0CG23 659 aa25.72■■□□□ 1.71
CTDP1-203ENST00000585951 CALD1Q05682 793 aaKnown RBP25.72■■□□□ 1.71
CTDP1-203ENST00000585951 BICDL1Q6ZP65 573 aa25.72■■□□□ 1.71
CTDP1-203ENST00000585951 BRCA1P38398 1863 aaKnown RBP25.72■■□□□ 1.71
CTDP1-203ENST00000585951 RGL2O15211 777 aa25.71■■□□□ 1.71
CTDP1-203ENST00000585951 CLEC4GQ6UXB4 293 aa25.71■■□□□ 1.71
CTDP1-203ENST00000585951 GRIN3BO60391 1043 aa25.7■■□□□ 1.7
CTDP1-203ENST00000585951 IFT57Q9NWB7 429 aa25.7■■□□□ 1.7
CTDP1-203ENST00000585951 A0A0G2JLW4 131 aa25.69■■□□□ 1.7
CTDP1-203ENST00000585951 EIF2S2P20042 333 aaKnown RBP25.69■■□□□ 1.7
CTDP1-203ENST00000585951 CCDC27Q2M243 656 aa25.69■■□□□ 1.7
CTDP1-203ENST00000585951 KRT24Q2M2I5 525 aa25.69■■□□□ 1.7
CTDP1-203ENST00000585951 MBIPQ9NS73 344 aa25.69■■□□□ 1.7
CTDP1-203ENST00000585951 ZNF652Q9Y2D9 606 aa25.69■■□□□ 1.7
CTDP1-203ENST00000585951 CARMIL3Q8ND23 1372 aa25.69■■□□□ 1.7
CTDP1-203ENST00000585951 DPEP1P16444 411 aa25.68■■□□□ 1.7
CTDP1-203ENST00000585951 NCBP3Q53F19 620 aaKnown RBP25.68■■□□□ 1.7
CTDP1-203ENST00000585951 MYL6BP14649 208 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 YY1P25490 414 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 GNAI1P63096 354 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 PDIA6Q15084 440 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 NGEFQ8N5V2 710 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 WWC3Q9ULE0 1092 aa25.67■■□□□ 1.7
CTDP1-203ENST00000585951 NUP98P52948 1817 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms