RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 NFE2L2Q16236 605 aa27.68■■■□□ 2.02
PTBP1-207ENST00000585932 GPR162Q16538 588 aa27.68■■■□□ 2.02
PTBP1-207ENST00000585932 FMNL2Q96PY5 1086 aa27.67■■■□□ 2.02
PTBP1-207ENST00000585932 THUMPD2Q9BTF0 503 aaKnown RBP27.67■■■□□ 2.02
PTBP1-207ENST00000585932 COL15A1P39059 1388 aa27.67■■■□□ 2.02
PTBP1-207ENST00000585932 KIF13BQ9NQT8 1826 aa27.67■■■□□ 2.02
PTBP1-207ENST00000585932 CANXP27824 592 aaKnown RBP27.66■■■□□ 2.02
PTBP1-207ENST00000585932 DDR1Q08345 913 aa27.66■■■□□ 2.02
PTBP1-207ENST00000585932 PELP1Q8IZL8 1130 aaKnown RBP27.66■■■□□ 2.02
PTBP1-207ENST00000585932 MIS18AQ9NYP9 233 aa27.66■■■□□ 2.02
PTBP1-207ENST00000585932 USPL1Q5W0Q7 1092 aa27.65■■■□□ 2.02
PTBP1-207ENST00000585932 BCL2L12Q9HB09 334 aa27.65■■■□□ 2.02
PTBP1-207ENST00000585932 C10orf71Q711Q0 1435 aa27.65■■■□□ 2.02
PTBP1-207ENST00000585932 EIF5P55010 431 aaKnown RBP27.64■■■□□ 2.02
PTBP1-207ENST00000585932 STARD3NLO95772 234 aa27.63■■■□□ 2.01
PTBP1-207ENST00000585932 A1BGP04217 495 aa27.62■■■□□ 2.01
PTBP1-207ENST00000585932 NARFQ9UHQ1 456 aa27.62■■■□□ 2.01
PTBP1-207ENST00000585932 WWC3Q9ULE0 1092 aa27.62■■■□□ 2.01
PTBP1-207ENST00000585932 USP16Q9Y5T5 823 aa27.62■■■□□ 2.01
PTBP1-207ENST00000585932 PXDNLA1KZ92 1463 aa27.62■■■□□ 2.01
PTBP1-207ENST00000585932 KDM3BQ7LBC6 1761 aa27.61■■■□□ 2.01
PTBP1-207ENST00000585932 TM4SF1P30408 202 aa27.61■■■□□ 2.01
PTBP1-207ENST00000585932 TAF7Q15545 349 aaPredicted RBP27.61■■■□□ 2.01
PTBP1-207ENST00000585932 MAPK8IP3Q9UPT6 1336 aa27.61■■■□□ 2.01
PTBP1-207ENST00000585932 TEX13AQ9BXU3 409 aaPredicted RBP27.6■■■□□ 2.01
PTBP1-207ENST00000585932 CHD4Q14839 1912 aa27.6■■■□□ 2.01
PTBP1-207ENST00000585932 N4BP2Q86UW6 1770 aaPredicted RBP27.59■■■□□ 2.01
PTBP1-207ENST00000585932 ZPR1O75312 459 aa27.59■■■□□ 2.01
PTBP1-207ENST00000585932 NEFMP07197 916 aa27.59■■■□□ 2.01
PTBP1-207ENST00000585932 PIP4K2AP48426 406 aaPredicted RBP27.59■■■□□ 2.01
PTBP1-207ENST00000585932 CCDC146Q8IYE0 955 aa27.59■■■□□ 2.01
PTBP1-207ENST00000585932 PARP3Q9Y6F1 533 aa27.59■■■□□ 2.01
PTBP1-207ENST00000585932 POLRMTO00411 1230 aaKnown RBP27.58■■■□□ 2.01
PTBP1-207ENST00000585932 PNNQ9H307 717 aaKnown RBP27.58■■■□□ 2.01
PTBP1-207ENST00000585932 NFIXQ14938 502 aa27.57■■■□□ 2
PTBP1-207ENST00000585932 TMPOP42166 694 aaKnown RBP27.56■■■□□ 2
PTBP1-207ENST00000585932 ADAMTS8Q9UP79 889 aa27.56■■■□□ 2
PTBP1-207ENST00000585932 SCN7AQ01118 1682 aa27.56■■■□□ 2
PTBP1-207ENST00000585932 SNRPA1P09661 255 aaKnown RBP27.55■■■□□ 2
PTBP1-207ENST00000585932 RRP7AQ9Y3A4 280 aaKnown RBP27.55■■■□□ 2
PTBP1-207ENST00000585932 A0A0G2JLW4 131 aa27.54■■■□□ 2
PTBP1-207ENST00000585932 IL6STP40189 918 aaPredicted RBP27.54■■■□□ 2
PTBP1-207ENST00000585932 RIPK4P57078 832 aa27.54■■■□□ 2
PTBP1-207ENST00000585932 AFDNP55196 1824 aaKnown RBP27.53■■■□□ 2
PTBP1-207ENST00000585932 NBPF26B4DH59 902 aa27.53■■■□□ 2
PTBP1-207ENST00000585932 NBPF10Q6P3W6 841 aaKnown RBP27.53■■■□□ 2
PTBP1-207ENST00000585932 NBPF15Q8N660 670 aa27.53■■■□□ 2
PTBP1-207ENST00000585932 TBC1D2BQ9UPU7 963 aa27.53■■■□□ 2
PTBP1-207ENST00000585932 ZNF330Q9Y3S2 320 aaPredicted RBP27.53■■■□□ 2
PTBP1-207ENST00000585932 NRXN2Q9P2S2 1712 aa27.53■■■□□ 2
PTBP1-207ENST00000585932 DPEP1P16444 411 aa27.52■■■□□ 2
PTBP1-207ENST00000585932 CCDC184Q52MB2 194 aa27.52■■■□□ 2
PTBP1-207ENST00000585932 ZNF316A6NFI3 1004 aaPredicted RBP27.51■■□□□ 1.99
PTBP1-207ENST00000585932 KCNA3P22001 575 aa27.51■■□□□ 1.99
PTBP1-207ENST00000585932 EIF4A1P60842 406 aaKnown RBP27.51■■□□□ 1.99
PTBP1-207ENST00000585932 TGFB2P61812 414 aa27.51■■□□□ 1.99
PTBP1-207ENST00000585932 BRCA1P38398 1863 aaKnown RBP27.51■■□□□ 1.99
PTBP1-207ENST00000585932 LAMB4A4D0S4 1761 aa27.5■■□□□ 1.99
PTBP1-207ENST00000585932 GRIN3BO60391 1043 aa27.5■■□□□ 1.99
PTBP1-207ENST00000585932 A0A087WZG4 1122 aa27.49■■□□□ 1.99
PTBP1-207ENST00000585932 CAMTA2O94983 1202 aa27.49■■□□□ 1.99
PTBP1-207ENST00000585932 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
PTBP1-207ENST00000585932 BCORQ6W2J9 1755 aa27.48■■□□□ 1.99
PTBP1-207ENST00000585932 GIGYF1O75420 1035 aaPredicted RBP27.48■■□□□ 1.99
PTBP1-207ENST00000585932 TBC1D9BQ66K14 1250 aa27.48■■□□□ 1.99
PTBP1-207ENST00000585932 ZNF784Q8NCA9 323 aaPredicted RBP27.48■■□□□ 1.99
PTBP1-207ENST00000585932 PNISRQ8TF01 805 aaKnown RBP27.48■■□□□ 1.99
PTBP1-207ENST00000585932 RUNDC1Q96C34 613 aa27.48■■□□□ 1.99
PTBP1-207ENST00000585932 TRIM35Q9UPQ4 493 aa27.48■■□□□ 1.99
PTBP1-207ENST00000585932 NEUROD2Q15784 382 aa27.47■■□□□ 1.99
PTBP1-207ENST00000585932 BICDL1Q6ZP65 573 aa27.47■■□□□ 1.99
PTBP1-207ENST00000585932 CARMIL3Q8ND23 1372 aa27.47■■□□□ 1.99
PTBP1-207ENST00000585932 SERPINB2P05120 415 aa27.45■■□□□ 1.98
PTBP1-207ENST00000585932 CHRNA5P30532 468 aa27.44■■□□□ 1.98
PTBP1-207ENST00000585932 DZIP3Q86Y13 1208 aaKnown RBP27.44■■□□□ 1.98
PTBP1-207ENST00000585932 TSPYL4Q9UJ04 414 aa27.42■■□□□ 1.98
PTBP1-207ENST00000585932 BCS1LQ9Y276 419 aa27.41■■□□□ 1.98
PTBP1-207ENST00000585932 LMOD3Q0VAK6 560 aa27.4■■□□□ 1.98
PTBP1-207ENST00000585932 ANKRD31Q8N7Z5 1873 aa27.4■■□□□ 1.98
PTBP1-207ENST00000585932 CCDC24Q8N4L8 307 aa27.38■■□□□ 1.97
PTBP1-207ENST00000585932 CHL1O00533 1208 aa27.36■■□□□ 1.97
PTBP1-207ENST00000585932 APAF1O14727 1248 aa27.36■■□□□ 1.97
PTBP1-207ENST00000585932 KRT24Q2M2I5 525 aa27.36■■□□□ 1.97
PTBP1-207ENST00000585932 PRR5LQ6MZQ0 368 aa27.36■■□□□ 1.97
PTBP1-207ENST00000585932 BABAM1Q9NWV8 329 aa27.36■■□□□ 1.97
PTBP1-207ENST00000585932 ARFGEF1Q9Y6D6 1849 aa27.36■■□□□ 1.97
PTBP1-207ENST00000585932 ADCY9O60503 1353 aa27.35■■□□□ 1.97
PTBP1-207ENST00000585932 DLEC1Q9Y238 1755 aa27.35■■□□□ 1.97
PTBP1-207ENST00000585932 HLFQ16534 295 aa27.35■■□□□ 1.97
PTBP1-207ENST00000585932 PIM2Q9P1W9 311 aa27.35■■□□□ 1.97
PTBP1-207ENST00000585932 NPM2Q86SE8 214 aaKnown RBP27.34■■□□□ 1.97
PTBP1-207ENST00000585932 COL11A2P13942 1736 aaPredicted RBP27.33■■□□□ 1.97
PTBP1-207ENST00000585932 PDIA6Q15084 440 aa27.33■■□□□ 1.97
PTBP1-207ENST00000585932 TTLL7Q6ZT98 887 aa27.33■■□□□ 1.97
PTBP1-207ENST00000585932 LRP10Q7Z4F1 713 aa27.33■■□□□ 1.97
PTBP1-207ENST00000585932 NGEFQ8N5V2 710 aa27.33■■□□□ 1.97
PTBP1-207ENST00000585932 SETDB2Q96T68 719 aa27.33■■□□□ 1.97
PTBP1-207ENST00000585932 DALRD3Q5D0E6 543 aaKnown RBP27.32■■□□□ 1.96
PTBP1-207ENST00000585932 CLEC4GQ6UXB4 293 aa27.32■■□□□ 1.96
PTBP1-207ENST00000585932 MYL6BP14649 208 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms