RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 USPL1Q5W0Q7 1092 aa35.85■■■■□ 3.33
PTBP1-206ENST00000585856 COL15A1P39059 1388 aa35.85■■■■□ 3.33
PTBP1-206ENST00000585856 NRXN2Q9P2S2 1712 aa35.83■■■■□ 3.33
PTBP1-206ENST00000585856 DALRD3Q5D0E6 543 aaKnown RBP35.83■■■■□ 3.33
PTBP1-206ENST00000585856 NARFQ9UHQ1 456 aa35.83■■■■□ 3.33
PTBP1-206ENST00000585856 ZBTB1Q9Y2K1 713 aa35.81■■■■□ 3.32
PTBP1-206ENST00000585856 SIPA1L3O60292 1781 aaPredicted RBP35.81■■■■□ 3.32
PTBP1-206ENST00000585856 TTC5Q8N0Z6 440 aa35.8■■■■□ 3.32
PTBP1-206ENST00000585856 SBF1O95248 1867 aa35.78■■■■□ 3.32
PTBP1-206ENST00000585856 GAS2L2Q8NHY3 880 aa35.78■■■■□ 3.32
PTBP1-206ENST00000585856 DLEC1Q9Y238 1755 aa35.78■■■■□ 3.32
PTBP1-206ENST00000585856 U2SURPO15042 1029 aaKnown RBP35.77■■■■□ 3.32
PTBP1-206ENST00000585856 TOMM70O94826 608 aa35.76■■■■□ 3.32
PTBP1-206ENST00000585856 STARD3NLO95772 234 aa35.76■■■■□ 3.32
PTBP1-206ENST00000585856 CHRNA5P30532 468 aa35.76■■■■□ 3.32
PTBP1-206ENST00000585856 NFIXQ14938 502 aa35.76■■■■□ 3.32
PTBP1-206ENST00000585856 C9orf131Q5VYM1 1079 aa35.76■■■■□ 3.32
PTBP1-206ENST00000585856 GNAT3A8MTJ3 354 aa35.75■■■■□ 3.31
PTBP1-206ENST00000585856 TEFQ10587 303 aa35.75■■■■□ 3.31
PTBP1-206ENST00000585856 ZNF790Q6PG37 636 aa35.71■■■■□ 3.31
PTBP1-206ENST00000585856 TEX13AQ9BXU3 409 aaPredicted RBP35.71■■■■□ 3.31
PTBP1-206ENST00000585856 CANXP27824 592 aaKnown RBP35.7■■■■□ 3.31
PTBP1-206ENST00000585856 IL17REQ8NFR9 667 aa35.7■■■■□ 3.31
PTBP1-206ENST00000585856 BCL2L12Q9HB09 334 aa35.7■■■■□ 3.31
PTBP1-206ENST00000585856 HEG1Q9ULI3 1381 aa35.69■■■■□ 3.3
PTBP1-206ENST00000585856 A0A087WZG4 1122 aa35.69■■■■□ 3.3
PTBP1-206ENST00000585856 SERPINB2P05120 415 aa35.69■■■■□ 3.3
PTBP1-206ENST00000585856 CNGB1Q14028 1251 aaPredicted RBP35.69■■■■□ 3.3
PTBP1-206ENST00000585856 NMRK2Q9NPI5 230 aa35.69■■■■□ 3.3
PTBP1-206ENST00000585856 SCN7AQ01118 1682 aa35.68■■■■□ 3.3
PTBP1-206ENST00000585856 EIF5P55010 431 aaKnown RBP35.68■■■■□ 3.3
PTBP1-206ENST00000585856 ZNF496Q96IT1 587 aaPredicted RBP35.68■■■■□ 3.3
PTBP1-206ENST00000585856 CFAP53Q96M91 514 aa35.67■■■■□ 3.3
PTBP1-206ENST00000585856 RNF181Q9P0P0 153 aa35.67■■■■□ 3.3
PTBP1-206ENST00000585856 TNRC6CQ9HCJ0 1690 aaKnown RBP35.67■■■■□ 3.3
PTBP1-206ENST00000585856 KDM2BQ8NHM5 1336 aa35.66■■■■□ 3.3
PTBP1-206ENST00000585856 APLP1P51693 650 aa35.66■■■■□ 3.3
PTBP1-206ENST00000585856 CEMIPQ8WUJ3 1361 aa35.65■■■■□ 3.3
PTBP1-206ENST00000585856 FMNL2Q96PY5 1086 aa35.62■■■■□ 3.29
PTBP1-206ENST00000585856 ZC3H4Q9UPT8 1303 aaKnown RBP35.61■■■■□ 3.29
PTBP1-206ENST00000585856 C16orf71Q8IYS4 520 aaPredicted RBP35.61■■■■□ 3.29
PTBP1-206ENST00000585856 RBM46Q8TBY0 533 aaKnown RBP35.61■■■■□ 3.29
PTBP1-206ENST00000585856 TTLL6Q8N841 843 aa35.6■■■■□ 3.29
PTBP1-206ENST00000585856 NUDCQ9Y266 331 aa35.6■■■■□ 3.29
PTBP1-206ENST00000585856 CCDC88AQ3V6T2 1871 aa35.6■■■■□ 3.29
PTBP1-206ENST00000585856 ANKRD31Q8N7Z5 1873 aa35.59■■■■□ 3.29
PTBP1-206ENST00000585856 H0YIN7 160 aa35.59■■■■□ 3.29
PTBP1-206ENST00000585856 PRKAR2BP31323 418 aa35.59■■■■□ 3.29
PTBP1-206ENST00000585856 IL6STP40189 918 aaPredicted RBP35.59■■■■□ 3.29
PTBP1-206ENST00000585856 RSPH6AQ9H0K4 717 aa35.59■■■■□ 3.29
PTBP1-206ENST00000585856 BICDL1Q6ZP65 573 aa35.57■■■■□ 3.28
PTBP1-206ENST00000585856 NPM2Q86SE8 214 aaKnown RBP35.57■■■■□ 3.28
PTBP1-206ENST00000585856 C2CD5Q86YS7 1000 aa35.57■■■■□ 3.28
PTBP1-206ENST00000585856 PHACTR3Q96KR7 559 aa35.57■■■■□ 3.28
PTBP1-206ENST00000585856 PDZRN3Q9UPQ7 1066 aa35.57■■■■□ 3.28
PTBP1-206ENST00000585856 CARMIL3Q8ND23 1372 aa35.56■■■■□ 3.28
PTBP1-206ENST00000585856 WDR90Q96KV7 1748 aa35.56■■■■□ 3.28
PTBP1-206ENST00000585856 BCORQ6W2J9 1755 aa35.56■■■■□ 3.28
PTBP1-206ENST00000585856 BTBD11A6QL63 1104 aa35.55■■■■□ 3.28
PTBP1-206ENST00000585856 TBC1D9BQ66K14 1250 aa35.55■■■■□ 3.28
PTBP1-206ENST00000585856 ZNF330Q9Y3S2 320 aaPredicted RBP35.55■■■■□ 3.28
PTBP1-206ENST00000585856 LMNB1P20700 586 aa35.54■■■■□ 3.28
PTBP1-206ENST00000585856 RASSF7Q02833 373 aa35.53■■■■□ 3.28
PTBP1-206ENST00000585856 FSTL1Q12841 308 aa35.53■■■■□ 3.28
PTBP1-206ENST00000585856 TIAM2Q8IVF5 1701 aa35.53■■■■□ 3.28
PTBP1-206ENST00000585856 TBC1D2BQ9UPU7 963 aa35.53■■■■□ 3.28
PTBP1-206ENST00000585856 PDE6BP35913 854 aa35.52■■■■□ 3.28
PTBP1-206ENST00000585856 IFFO2Q5TF58 517 aa35.52■■■■□ 3.28
PTBP1-206ENST00000585856 BRIP1Q9BX63 1249 aa35.51■■■■□ 3.28
PTBP1-206ENST00000585856 RRAGCQ9HB90 399 aa35.5■■■■□ 3.27
PTBP1-206ENST00000585856 COL11A2P13942 1736 aaPredicted RBP35.49■■■■□ 3.27
PTBP1-206ENST00000585856 A1BGP04217 495 aa35.49■■■■□ 3.27
PTBP1-206ENST00000585856 U2AF1L5P0DN76 240 aaPredicted RBP35.49■■■■□ 3.27
PTBP1-206ENST00000585856 U2AF1Q01081 240 aaKnown RBP eCLIP35.49■■■■□ 3.27
PTBP1-206ENST00000585856 RTF1Q92541 710 aaKnown RBP35.49■■■■□ 3.27
PTBP1-206ENST00000585856 PPP2R1AP30153 589 aa35.48■■■■□ 3.27
PTBP1-206ENST00000585856 PRR5LQ6MZQ0 368 aa35.47■■■■□ 3.27
PTBP1-206ENST00000585856 SETDB2Q96T68 719 aa35.47■■■■□ 3.27
PTBP1-206ENST00000585856 FER1L6Q2WGJ9 1857 aa35.47■■■■□ 3.27
PTBP1-206ENST00000585856 DICER1Q9UPY3 1922 aaKnown RBP35.47■■■■□ 3.27
PTBP1-206ENST00000585856 KCNQ3O43525 872 aa35.46■■■■□ 3.27
PTBP1-206ENST00000585856 CAMTA2O94983 1202 aa35.46■■■■□ 3.27
PTBP1-206ENST00000585856 DNAJC5GQ8N7S2 189 aa35.46■■■■□ 3.27
PTBP1-206ENST00000585856 ZNF622Q969S3 477 aaKnown RBP eCLIP35.44■■■■□ 3.261e-20■□□□□ 8.4
PTBP1-206ENST00000585856 CACNA1SQ13698 1873 aa35.43■■■■□ 3.26
PTBP1-206ENST00000585856 ARFGEF2Q9Y6D5 1785 aa35.43■■■■□ 3.26
PTBP1-206ENST00000585856 GLTPD2A6NH11 291 aa35.43■■■■□ 3.26
PTBP1-206ENST00000585856 DZIP3Q86Y13 1208 aaKnown RBP35.43■■■■□ 3.26
PTBP1-206ENST00000585856 CNBD1Q8NA66 436 aa35.43■■■■□ 3.26
PTBP1-206ENST00000585856 USP16Q9Y5T5 823 aa35.43■■■■□ 3.26
PTBP1-206ENST00000585856 NFKBIEO00221 500 aa35.42■■■■□ 3.26
PTBP1-206ENST00000585856 NPHP1O15259 732 aa35.42■■■■□ 3.26
PTBP1-206ENST00000585856 HTATSF1O43719 755 aaKnown RBP35.42■■■■□ 3.26
PTBP1-206ENST00000585856 SNRPA1P09661 255 aaKnown RBP35.42■■■■□ 3.26
PTBP1-206ENST00000585856 PRELPP51888 382 aa35.42■■■■□ 3.26
PTBP1-206ENST00000585856 MCM10Q7L590 875 aa35.41■■■■□ 3.26
PTBP1-206ENST00000585856 ST5P78524 1137 aa35.4■■■■□ 3.26
PTBP1-206ENST00000585856 SMC1BQ8NDV3 1235 aa35.4■■■■□ 3.26
PTBP1-206ENST00000585856 CLEC4GQ6UXB4 293 aa35.39■■■■□ 3.26
PTBP1-206ENST00000585856 VEGFAP15692 232 aaPredicted RBP35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms