RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
SMARCA4-208ENST00000585799 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 RABEP1Q15276 862 aa15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 LARP1Q6PKG0 1096 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 ZNF496Q96IT1 587 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 FMNL2Q96PY5 1086 aa15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 ZNF790Q6PG37 636 aa15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 KLHDC4Q8TBB5 520 aa15.14■□□□□ 0.01
SMARCA4-208ENST00000585799 DDX49Q9Y6V7 483 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-208ENST00000585799 A0A087WZG4 1122 aa15.13■□□□□ 0.01
SMARCA4-208ENST00000585799 SHPRHQ149N8 1683 aa15.13■□□□□ 0.01
SMARCA4-208ENST00000585799 KSR2Q6VAB6 950 aa15.13■□□□□ 0.01
SMARCA4-208ENST00000585799 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
SMARCA4-208ENST00000585799 ZCRB1Q8TBF4 217 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-208ENST00000585799 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 PTCH1Q13635 1447 aa15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 SLAIN2Q9P270 581 aa15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 USP16Q9Y5T5 823 aa15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 DIP2AQ14689 1571 aa15.12■□□□□ 0.01
SMARCA4-208ENST00000585799 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-208ENST00000585799 RUFY2Q8WXA3 655 aa15.11■□□□□ 0.01
SMARCA4-208ENST00000585799 ANKARQ7Z5J8 1434 aa15.11■□□□□ 0.01
SMARCA4-208ENST00000585799 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
SMARCA4-208ENST00000585799 TRAK2O60296 914 aa15.11■□□□□ 0.01
SMARCA4-208ENST00000585799 MCM4P33991 863 aa15.11■□□□□ 0.01
SMARCA4-208ENST00000585799 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-208ENST00000585799 BRPF3Q9ULD4 1205 aa15.1■□□□□ 0.01
SMARCA4-208ENST00000585799 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
SMARCA4-208ENST00000585799 GRM8O00222 908 aa15.1■□□□□ 0.01
SMARCA4-208ENST00000585799 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
SMARCA4-208ENST00000585799 ERBB3P21860 1342 aa15.09■□□□□ 0.01
SMARCA4-208ENST00000585799 DDX11L8A8MPP1 907 aa15.09■□□□□ 0.01
SMARCA4-208ENST00000585799 GPTP24298 496 aa15.09■□□□□ 0.01
SMARCA4-208ENST00000585799 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
SMARCA4-208ENST00000585799 DTNBO60941 627 aa15.09■□□□□ 0.01
SMARCA4-208ENST00000585799 PLCB2Q00722 1185 aa15.09■□□□□ 0.01
SMARCA4-208ENST00000585799 RAB11FIP3O75154 756 aa15.08■□□□□ 0.01
SMARCA4-208ENST00000585799 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0.01
SMARCA4-208ENST00000585799 SSFA2P28290 1259 aa15.08■□□□□ 0.01
SMARCA4-208ENST00000585799 DDX21Q9NR30 783 aaKnown RBP eCLIP15.08■□□□□ 0.01
SMARCA4-208ENST00000585799 CRB1P82279 1406 aa15.08■□□□□ 0
SMARCA4-208ENST00000585799 SLC52A2Q9HAB3 445 aa15.08■□□□□ 0
SMARCA4-208ENST00000585799 RIMS1Q86UR5 1692 aaKnown RBP15.08■□□□□ 0
SMARCA4-208ENST00000585799 A1BGP04217 495 aa15.08■□□□□ 0
SMARCA4-208ENST00000585799 ERC1Q8IUD2 1116 aa15.08■□□□□ 0
SMARCA4-208ENST00000585799 LINS1Q8NG48 757 aa15.08■□□□□ 0
SMARCA4-208ENST00000585799 ZKSCAN1P17029 563 aaPredicted RBP15.07■□□□□ 0
SMARCA4-208ENST00000585799 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
SMARCA4-208ENST00000585799 PHKG2P15735 406 aa15.07■□□□□ 0
SMARCA4-208ENST00000585799 TRIM44Q96DX7 344 aaPredicted RBP15.07■□□□□ 0
SMARCA4-208ENST00000585799 DCAF5Q96JK2 942 aa15.07■□□□□ 0
SMARCA4-208ENST00000585799 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
SMARCA4-208ENST00000585799 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
SMARCA4-208ENST00000585799 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
SMARCA4-208ENST00000585799 BTG4Q9NY30 223 aa15.06■□□□□ 0
SMARCA4-208ENST00000585799 GLRX3O76003 335 aaKnown RBP15.06■□□□□ 0
SMARCA4-208ENST00000585799 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
SMARCA4-208ENST00000585799 FOSBP53539 338 aa15.06■□□□□ 0
SMARCA4-208ENST00000585799 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
SMARCA4-208ENST00000585799 L1TD1Q5T7N2 865 aaKnown RBP15.05■□□□□ 0
SMARCA4-208ENST00000585799 SUCLG2Q96I99 432 aa15.05■□□□□ 0
SMARCA4-208ENST00000585799 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ 0
SMARCA4-208ENST00000585799 IL2RBP14784 551 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 BEND3Q5T5X7 828 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 IL27Q8NEV9 243 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 TNPO1Q92973 898 aaKnown RBP15.05■□□□□ -0
SMARCA4-208ENST00000585799 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 ESYT1Q9BSJ8 1104 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 USP26Q9BXU7 913 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 BABAM1Q9NWV8 329 aa15.05■□□□□ -0
SMARCA4-208ENST00000585799 FER1L4A9Z1Z3 1794 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
SMARCA4-208ENST00000585799 PRPF40BQ6NWY9 871 aaKnown RBP15.04■□□□□ -0
SMARCA4-208ENST00000585799 KDRP35968 1356 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 ALDH1L1O75891 902 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 UNC5CLQ8IV45 518 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
SMARCA4-208ENST00000585799 VPS37CA5D8V6 355 aaPredicted RBP15.03■□□□□ -0
SMARCA4-208ENST00000585799 BRINP3Q76B58 766 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 ADGRB2O60241 1585 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 PRPF40AO75400 957 aaKnown RBP15.03■□□□□ -0
SMARCA4-208ENST00000585799 NUCB2P80303 420 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 JAKMIP1Q96N16 626 aaKnown RBP15.03■□□□□ -0
SMARCA4-208ENST00000585799 WASHC4Q2M389 1173 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 ITSN1Q15811 1721 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 ARHGAP23Q9P227 1491 aa15.03■□□□□ -0
SMARCA4-208ENST00000585799 CYP27B1O15528 508 aa15.02■□□□□ -0
SMARCA4-208ENST00000585799 CHMLP26374 656 aa15.02■□□□□ -0
SMARCA4-208ENST00000585799 RBM25P49756 843 aaKnown RBP15.02■□□□□ -0
SMARCA4-208ENST00000585799 FKBP4Q02790 459 aaKnown RBP eCLIP15.02■□□□□ -0
SMARCA4-208ENST00000585799 NRXN3Q9Y4C0 1643 aa15.02■□□□□ -0
SMARCA4-208ENST00000585799 KDM4FA0A1W2PPD8 638 aa15.02□□□□□ -0.01
SMARCA4-208ENST00000585799 HOXB7P09629 217 aa15.02□□□□□ -0.01
SMARCA4-208ENST00000585799 STK3Q13188 491 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms