RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 PTCD1O75127 700 aaKnown RBP21.78■■□□□ 1.08
HMG20B-215ENST00000585741 TWISTNBQ3B726 338 aaPredicted RBP21.78■■□□□ 1.08
HMG20B-215ENST00000585741 NLGN2Q8NFZ4 835 aa21.78■■□□□ 1.08
HMG20B-215ENST00000585741 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
HMG20B-215ENST00000585741 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
HMG20B-215ENST00000585741 POLD1P28340 1107 aa21.77■■□□□ 1.08
HMG20B-215ENST00000585741 COL23A1Q86Y22 540 aaPredicted RBP21.77■■□□□ 1.08
HMG20B-215ENST00000585741 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
HMG20B-215ENST00000585741 ATG3Q9NT62 314 aa21.76■■□□□ 1.07
HMG20B-215ENST00000585741 SIPA1L3O60292 1781 aaPredicted RBP21.76■■□□□ 1.07
HMG20B-215ENST00000585741 ITGB4P16144 1822 aa21.76■■□□□ 1.07
HMG20B-215ENST00000585741 GPR162Q16538 588 aa21.75■■□□□ 1.07
HMG20B-215ENST00000585741 ZNF496Q96IT1 587 aaPredicted RBP21.75■■□□□ 1.07
HMG20B-215ENST00000585741 SOS1Q07889 1333 aaPredicted RBP21.75■■□□□ 1.07
HMG20B-215ENST00000585741 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
HMG20B-215ENST00000585741 KRT24Q2M2I5 525 aa21.74■■□□□ 1.07
HMG20B-215ENST00000585741 HOXB7P09629 217 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 KLHL34Q8N239 644 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 TSPYL6Q8N831 410 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 ZNF428Q96B54 188 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 RCAN3Q9UKA8 241 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 KDM3BQ7LBC6 1761 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
HMG20B-215ENST00000585741 EIF2S2P20042 333 aaKnown RBP21.72■■□□□ 1.07
HMG20B-215ENST00000585741 HEG1Q9ULI3 1381 aa21.72■■□□□ 1.07
HMG20B-215ENST00000585741 VAMP4O75379 141 aa21.71■■□□□ 1.07
HMG20B-215ENST00000585741 GIGYF1O75420 1035 aaPredicted RBP21.71■■□□□ 1.07
HMG20B-215ENST00000585741 STK31Q9BXU1 1019 aa21.71■■□□□ 1.07
HMG20B-215ENST00000585741 TEX13AQ9BXU3 409 aaPredicted RBP21.71■■□□□ 1.07
HMG20B-215ENST00000585741 C5P01031 1676 aa21.7■■□□□ 1.06
HMG20B-215ENST00000585741 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
HMG20B-215ENST00000585741 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.06
HMG20B-215ENST00000585741 VSIG10Q8N0Z9 540 aa21.7■■□□□ 1.06
HMG20B-215ENST00000585741 YBX3P16989 372 aaKnown RBP eCLIP21.69■■□□□ 1.06
HMG20B-215ENST00000585741 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
HMG20B-215ENST00000585741 AMIGO3Q86WK7 504 aa21.69■■□□□ 1.06
HMG20B-215ENST00000585741 NECTIN2Q92692 538 aa21.69■■□□□ 1.06
HMG20B-215ENST00000585741 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
HMG20B-215ENST00000585741 LOC102724428A0A0B4J2F2 783 aa21.68■■□□□ 1.06
HMG20B-215ENST00000585741 SIK1P57059 783 aa21.68■■□□□ 1.06
HMG20B-215ENST00000585741 C1QTNF8P60827 252 aa21.68■■□□□ 1.06
HMG20B-215ENST00000585741 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
HMG20B-215ENST00000585741 STARD3NLO95772 234 aa21.67■■□□□ 1.06
HMG20B-215ENST00000585741 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
HMG20B-215ENST00000585741 MSL1Q68DK7 614 aa21.67■■□□□ 1.06
HMG20B-215ENST00000585741 MSH5O43196 834 aa21.66■■□□□ 1.06
HMG20B-215ENST00000585741 HMGB2P26583 209 aaKnown RBP21.66■■□□□ 1.06
HMG20B-215ENST00000585741 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
HMG20B-215ENST00000585741 RARSP54136 660 aaKnown RBP21.66■■□□□ 1.06
HMG20B-215ENST00000585741 KCPQ6ZWJ8 1503 aa21.65■■□□□ 1.06
HMG20B-215ENST00000585741 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
HMG20B-215ENST00000585741 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
HMG20B-215ENST00000585741 PRAMEF22A3QJZ6 481 aa21.64■■□□□ 1.05
HMG20B-215ENST00000585741 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
HMG20B-215ENST00000585741 NPM2Q86SE8 214 aaKnown RBP21.64■■□□□ 1.05
HMG20B-215ENST00000585741 DNAJC10Q8IXB1 793 aa21.64■■□□□ 1.05
HMG20B-215ENST00000585741 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
HMG20B-215ENST00000585741 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
HMG20B-215ENST00000585741 SSH1Q8WYL5 1049 aa21.63■■□□□ 1.05
HMG20B-215ENST00000585741 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
HMG20B-215ENST00000585741 UBR2Q8IWV8 1755 aa21.62■■□□□ 1.05
HMG20B-215ENST00000585741 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
HMG20B-215ENST00000585741 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
HMG20B-215ENST00000585741 SLC4A2P04920 1241 aa21.61■■□□□ 1.05
HMG20B-215ENST00000585741 FLAD1Q8NFF5 587 aa21.61■■□□□ 1.05
HMG20B-215ENST00000585741 FRAT1Q92837 279 aaPredicted RBP21.61■■□□□ 1.05
HMG20B-215ENST00000585741 CD2APQ9Y5K6 639 aa21.61■■□□□ 1.05
HMG20B-215ENST00000585741 KIF16BQ96L93 1317 aa21.6■■□□□ 1.05
HMG20B-215ENST00000585741 GRIN3BO60391 1043 aa21.6■■□□□ 1.05
HMG20B-215ENST00000585741 BCAR3O75815 825 aa21.6■■□□□ 1.05
HMG20B-215ENST00000585741 CHPF2Q9P2E5 772 aa21.6■■□□□ 1.05
HMG20B-215ENST00000585741 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
HMG20B-215ENST00000585741 ERBB4Q15303 1308 aa21.59■■□□□ 1.05
HMG20B-215ENST00000585741 IPO8O15397 1037 aaKnown RBP21.59■■□□□ 1.05
HMG20B-215ENST00000585741 SLC4A9Q96Q91 983 aa21.59■■□□□ 1.05
HMG20B-215ENST00000585741 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
HMG20B-215ENST00000585741 MYL6BP14649 208 aa21.58■■□□□ 1.05
HMG20B-215ENST00000585741 MRPL50Q8N5N7 158 aaKnown RBP21.58■■□□□ 1.05
HMG20B-215ENST00000585741 LINC00116Q8NCU8 138 aa21.58■■□□□ 1.05
HMG20B-215ENST00000585741 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
HMG20B-215ENST00000585741 HYPKQ9NX55 129 aa21.58■■□□□ 1.05
HMG20B-215ENST00000585741 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.05
HMG20B-215ENST00000585741 ITPK1Q13572 414 aa21.57■■□□□ 1.04
HMG20B-215ENST00000585741 A1BGP04217 495 aa21.56■■□□□ 1.04
HMG20B-215ENST00000585741 CYP19A1P11511 503 aaPredicted RBP21.56■■□□□ 1.04
HMG20B-215ENST00000585741 AK7Q96M32 723 aa21.56■■□□□ 1.04
HMG20B-215ENST00000585741 CCDC87Q9NVE4 849 aa21.56■■□□□ 1.04
HMG20B-215ENST00000585741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
HMG20B-215ENST00000585741 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
HMG20B-215ENST00000585741 ZKSCAN2Q63HK3 967 aa21.55■■□□□ 1.04
HMG20B-215ENST00000585741 LAMB4A4D0S4 1761 aa21.54■■□□□ 1.04
HMG20B-215ENST00000585741 DDX58O95786 925 aaKnown RBP21.54■■□□□ 1.04
HMG20B-215ENST00000585741 ANXA1P04083 346 aa21.54■■□□□ 1.04
HMG20B-215ENST00000585741 MS4A1P11836 297 aa21.54■■□□□ 1.04
HMG20B-215ENST00000585741 PIP4K2AP48426 406 aaPredicted RBP21.54■■□□□ 1.04
HMG20B-215ENST00000585741 NOB1Q9ULX3 412 aaKnown RBP21.54■■□□□ 1.04
HMG20B-215ENST00000585741 PHF14O94880 888 aa21.53■■□□□ 1.04
HMG20B-215ENST00000585741 NEFLP07196 543 aa21.53■■□□□ 1.04
HMG20B-215ENST00000585741 SSFA2P28290 1259 aa21.53■■□□□ 1.04
HMG20B-215ENST00000585741 BRPF1P55201 1214 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms