RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 LAMB4A4D0S4 1761 aa18.85■□□□□ 0.61
SCAMP4-209ENST00000585335 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
SCAMP4-209ENST00000585335 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-209ENST00000585335 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-209ENST00000585335 GNPATO15228 680 aa18.83■□□□□ 0.6
SCAMP4-209ENST00000585335 SLC15A2Q16348 729 aa18.83■□□□□ 0.6
SCAMP4-209ENST00000585335 AKT1S1Q96B36 256 aa18.83■□□□□ 0.6
SCAMP4-209ENST00000585335 YTHDC1Q96MU7 727 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-209ENST00000585335 ERBB4Q15303 1308 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 HDGFL1Q5TGJ6 251 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 RTCBQ9Y3I0 505 aaKnown RBP18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
SCAMP4-209ENST00000585335 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-209ENST00000585335 EIF2S2P20042 333 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-209ENST00000585335 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-209ENST00000585335 ZNF827Q17R98 1081 aa18.81■□□□□ 0.6
SCAMP4-209ENST00000585335 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-209ENST00000585335 C8orf58Q8NAV2 365 aa18.81■□□□□ 0.6
SCAMP4-209ENST00000585335 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
SCAMP4-209ENST00000585335 ADRA2BP18089 450 aa18.8■□□□□ 0.6
SCAMP4-209ENST00000585335 SSFA2P28290 1259 aa18.8■□□□□ 0.6
SCAMP4-209ENST00000585335 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
SCAMP4-209ENST00000585335 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-209ENST00000585335 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
SCAMP4-209ENST00000585335 ZBTB1Q9Y2K1 713 aa18.79■□□□□ 0.6
SCAMP4-209ENST00000585335 PHF14O94880 888 aa18.78■□□□□ 0.6
SCAMP4-209ENST00000585335 A1BGP04217 495 aa18.78■□□□□ 0.6
SCAMP4-209ENST00000585335 IL6STP40189 918 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-209ENST00000585335 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-209ENST00000585335 A0A087WZG4 1122 aa18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 MSH5O43196 834 aa18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 R3HDM1Q15032 1099 aaKnown RBP18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 NECTIN2Q92692 538 aa18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 STK31Q9BXU1 1019 aa18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 DBF4Q9UBU7 674 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 ZNF330Q9Y3S2 320 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-209ENST00000585335 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.59
SCAMP4-209ENST00000585335 UBR3Q6ZT12 1888 aa18.76■□□□□ 0.59
SCAMP4-209ENST00000585335 MYH14Q7Z406 1995 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-209ENST00000585335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-209ENST00000585335 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-209ENST00000585335 RFC4P35249 363 aa18.75■□□□□ 0.59
SCAMP4-209ENST00000585335 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
SCAMP4-209ENST00000585335 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCAMP4-209ENST00000585335 COL15A1P39059 1388 aa18.75■□□□□ 0.59
SCAMP4-209ENST00000585335 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
SCAMP4-209ENST00000585335 MYL6BP14649 208 aa18.74■□□□□ 0.59
SCAMP4-209ENST00000585335 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
SCAMP4-209ENST00000585335 HYPKQ9NX55 129 aa18.74■□□□□ 0.59
SCAMP4-209ENST00000585335 CHPF2Q9P2E5 772 aa18.74■□□□□ 0.59
SCAMP4-209ENST00000585335 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
SCAMP4-209ENST00000585335 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-209ENST00000585335 VAMP4O75379 141 aa18.73■□□□□ 0.59
SCAMP4-209ENST00000585335 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-209ENST00000585335 ARXQ96QS3 562 aa18.73■□□□□ 0.59
SCAMP4-209ENST00000585335 NBPF26B4DH59 902 aa18.72■□□□□ 0.59
SCAMP4-209ENST00000585335 ZPR1O75312 459 aa18.72■□□□□ 0.59
SCAMP4-209ENST00000585335 NBPF10Q6P3W6 841 aaKnown RBP18.72■□□□□ 0.59
SCAMP4-209ENST00000585335 NBPF15Q8N660 670 aa18.72■□□□□ 0.59
SCAMP4-209ENST00000585335 ARHGEF1Q92888 912 aaKnown RBP18.72■□□□□ 0.59
SCAMP4-209ENST00000585335 KIF6Q6ZMV9 814 aa18.71■□□□□ 0.59
SCAMP4-209ENST00000585335 COL23A1Q86Y22 540 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-209ENST00000585335 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
SCAMP4-209ENST00000585335 DZIP3Q86Y13 1208 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-209ENST00000585335 PDIA6Q15084 440 aa18.69■□□□□ 0.58
SCAMP4-209ENST00000585335 AMIGO3Q86WK7 504 aa18.69■□□□□ 0.58
SCAMP4-209ENST00000585335 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
SCAMP4-209ENST00000585335 ANXA1P04083 346 aa18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 PROSER3Q2NL68 480 aa18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 ALDH1L2Q3SY69 923 aa18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 SMIM5Q71RC9 77 aa18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 ZNF652Q9Y2D9 606 aa18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 C4AP0C0L4 1744 aa18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-209ENST00000585335 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-209ENST00000585335 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-209ENST00000585335 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
SCAMP4-209ENST00000585335 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-209ENST00000585335 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
SCAMP4-209ENST00000585335 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
SCAMP4-209ENST00000585335 CASZ1Q86V15 1759 aa18.66■□□□□ 0.58
SCAMP4-209ENST00000585335 RGL2O15211 777 aa18.66■□□□□ 0.58
SCAMP4-209ENST00000585335 COPS6Q7L5N1 327 aa18.66■□□□□ 0.58
SCAMP4-209ENST00000585335 CACNA1FO60840 1977 aa18.66■□□□□ 0.58
SCAMP4-209ENST00000585335 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 MTFR1LQ9H019 292 aa18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 SRP68Q9UHB9 627 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
SCAMP4-209ENST00000585335 SCN7AQ01118 1682 aa18.64■□□□□ 0.57
SCAMP4-209ENST00000585335 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms