RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 COL15A1P39059 1388 aa23.7■■□□□ 1.38
SRSF1-209ENST00000585096 A0A087WZG4 1122 aa23.69■■□□□ 1.38
SRSF1-209ENST00000585096 DCTN1Q14203 1278 aa23.69■■□□□ 1.38
SRSF1-209ENST00000585096 ZNF784Q8NCA9 323 aaPredicted RBP23.69■■□□□ 1.38
SRSF1-209ENST00000585096 MAPK8IP3Q9UPT6 1336 aa23.68■■□□□ 1.38
SRSF1-209ENST00000585096 KCNQ3O43525 872 aa23.68■■□□□ 1.38
SRSF1-209ENST00000585096 PLEKHF1Q96S99 279 aa23.68■■□□□ 1.38
SRSF1-209ENST00000585096 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
SRSF1-209ENST00000585096 TM4SF1P30408 202 aa23.67■■□□□ 1.38
SRSF1-209ENST00000585096 EIF5P55010 431 aaKnown RBP23.67■■□□□ 1.38
SRSF1-209ENST00000585096 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
SRSF1-209ENST00000585096 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
SRSF1-209ENST00000585096 UBR2Q8IWV8 1755 aa23.66■■□□□ 1.38
SRSF1-209ENST00000585096 DDR1Q08345 913 aa23.66■■□□□ 1.38
SRSF1-209ENST00000585096 TAF7Q15545 349 aaPredicted RBP23.66■■□□□ 1.38
SRSF1-209ENST00000585096 WWC3Q9ULE0 1092 aa23.66■■□□□ 1.38
SRSF1-209ENST00000585096 C4AP0C0L4 1744 aa23.65■■□□□ 1.38
SRSF1-209ENST00000585096 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
SRSF1-209ENST00000585096 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
SRSF1-209ENST00000585096 NFE2L2Q16236 605 aa23.65■■□□□ 1.38
SRSF1-209ENST00000585096 VIRMAQ69YN4 1812 aaKnown RBP23.64■■□□□ 1.38
SRSF1-209ENST00000585096 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.38
SRSF1-209ENST00000585096 A0A0G2JLW4 131 aa23.64■■□□□ 1.37
SRSF1-209ENST00000585096 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
SRSF1-209ENST00000585096 SNRPA1P09661 255 aaKnown RBP23.64■■□□□ 1.37
SRSF1-209ENST00000585096 PNISRQ8TF01 805 aaKnown RBP23.63■■□□□ 1.37
SRSF1-209ENST00000585096 ZNF330Q9Y3S2 320 aaPredicted RBP23.63■■□□□ 1.37
SRSF1-209ENST00000585096 SIPA1L3O60292 1781 aaPredicted RBP23.63■■□□□ 1.37
SRSF1-209ENST00000585096 A1BGP04217 495 aa23.62■■□□□ 1.37
SRSF1-209ENST00000585096 DPEP1P16444 411 aa23.62■■□□□ 1.37
SRSF1-209ENST00000585096 NFIXQ14938 502 aa23.62■■□□□ 1.37
SRSF1-209ENST00000585096 BCL2L12Q9HB09 334 aa23.62■■□□□ 1.37
SRSF1-209ENST00000585096 GOLGB1Q14789 3259 aaKnown RBP23.62■■□□□ 1.37
SRSF1-209ENST00000585096 USP16Q9Y5T5 823 aa23.61■■□□□ 1.37
SRSF1-209ENST00000585096 BCS1LQ9Y276 419 aa23.6■■□□□ 1.37
SRSF1-209ENST00000585096 TBC1D2BQ9UPU7 963 aa23.59■■□□□ 1.37
SRSF1-209ENST00000585096 MIS18AQ9NYP9 233 aa23.58■■□□□ 1.37
SRSF1-209ENST00000585096 CHD4Q14839 1912 aa23.58■■□□□ 1.37
SRSF1-209ENST00000585096 PRAMEF22A3QJZ6 481 aa23.57■■□□□ 1.36
SRSF1-209ENST00000585096 SERPINB2P05120 415 aa23.57■■□□□ 1.36
SRSF1-209ENST00000585096 PIM2Q9P1W9 311 aa23.57■■□□□ 1.36
SRSF1-209ENST00000585096 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
SRSF1-209ENST00000585096 BICDL1Q6ZP65 573 aa23.56■■□□□ 1.36
SRSF1-209ENST00000585096 KIF13BQ9NQT8 1826 aa23.55■■□□□ 1.36
SRSF1-209ENST00000585096 KCNA3P22001 575 aa23.55■■□□□ 1.36
SRSF1-209ENST00000585096 RIPK4P57078 832 aa23.55■■□□□ 1.36
SRSF1-209ENST00000585096 THUMPD2Q9BTF0 503 aaKnown RBP23.55■■□□□ 1.36
SRSF1-209ENST00000585096 PRKRIP1Q9H875 184 aaPredicted RBP23.55■■□□□ 1.36
SRSF1-209ENST00000585096 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
SRSF1-209ENST00000585096 DZIP3Q86Y13 1208 aaKnown RBP23.54■■□□□ 1.36
SRSF1-209ENST00000585096 CHRNA5P30532 468 aa23.53■■□□□ 1.36
SRSF1-209ENST00000585096 DALRD3Q5D0E6 543 aaKnown RBP23.53■■□□□ 1.36
SRSF1-209ENST00000585096 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
SRSF1-209ENST00000585096 CAMTA2O94983 1202 aa23.52■■□□□ 1.36
SRSF1-209ENST00000585096 PIP4K2AP48426 406 aaPredicted RBP23.52■■□□□ 1.36
SRSF1-209ENST00000585096 TMPOP42166 694 aaKnown RBP23.51■■□□□ 1.35
SRSF1-209ENST00000585096 EIF4A1P60842 406 aaKnown RBP23.51■■□□□ 1.35
SRSF1-209ENST00000585096 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
SRSF1-209ENST00000585096 SETDB2Q96T68 719 aa23.51■■□□□ 1.35
SRSF1-209ENST00000585096 GIGYF1O75420 1035 aaPredicted RBP23.5■■□□□ 1.35
SRSF1-209ENST00000585096 ZNF652Q9Y2D9 606 aa23.5■■□□□ 1.35
SRSF1-209ENST00000585096 CARMIL3Q8ND23 1372 aa23.5■■□□□ 1.35
SRSF1-209ENST00000585096 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
SRSF1-209ENST00000585096 NBPF26B4DH59 902 aa23.49■■□□□ 1.35
SRSF1-209ENST00000585096 NBPF10Q6P3W6 841 aaKnown RBP23.49■■□□□ 1.35
SRSF1-209ENST00000585096 CLEC4GQ6UXB4 293 aa23.49■■□□□ 1.35
SRSF1-209ENST00000585096 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
SRSF1-209ENST00000585096 NBPF15Q8N660 670 aa23.49■■□□□ 1.35
SRSF1-209ENST00000585096 RUNDC1Q96C34 613 aa23.49■■□□□ 1.35
SRSF1-209ENST00000585096 ATP10DQ9P241 1426 aa23.49■■□□□ 1.35
SRSF1-209ENST00000585096 BABAM1Q9NWV8 329 aa23.48■■□□□ 1.35
SRSF1-209ENST00000585096 TSPYL4Q9UJ04 414 aa23.48■■□□□ 1.35
SRSF1-209ENST00000585096 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
SRSF1-209ENST00000585096 H0YIN7 160 aa23.47■■□□□ 1.35
SRSF1-209ENST00000585096 RGL2O15211 777 aa23.47■■□□□ 1.35
SRSF1-209ENST00000585096 ADAMTS8Q9UP79 889 aa23.47■■□□□ 1.35
SRSF1-209ENST00000585096 PDZRN3Q9UPQ7 1066 aa23.47■■□□□ 1.35
SRSF1-209ENST00000585096 NPHP1O15259 732 aa23.46■■□□□ 1.35
SRSF1-209ENST00000585096 ADCY9O60503 1353 aa23.46■■□□□ 1.35
SRSF1-209ENST00000585096 NEUROD2Q15784 382 aa23.46■■□□□ 1.35
SRSF1-209ENST00000585096 C2CD5Q86YS7 1000 aa23.46■■□□□ 1.35
SRSF1-209ENST00000585096 BRIP1Q9BX63 1249 aa23.46■■□□□ 1.35
SRSF1-209ENST00000585096 RRP7AQ9Y3A4 280 aaKnown RBP23.46■■□□□ 1.35
SRSF1-209ENST00000585096 PDE6BP35913 854 aa23.45■■□□□ 1.34
SRSF1-209ENST00000585096 PRR5LQ6MZQ0 368 aa23.45■■□□□ 1.34
SRSF1-209ENST00000585096 GPBP1L1Q9HC44 474 aaPredicted RBP23.45■■□□□ 1.34
SRSF1-209ENST00000585096 CNBD1Q8NA66 436 aa23.44■■□□□ 1.34
SRSF1-209ENST00000585096 SCN7AQ01118 1682 aa23.44■■□□□ 1.34
SRSF1-209ENST00000585096 NRXN2Q9P2S2 1712 aa23.43■■□□□ 1.34
SRSF1-209ENST00000585096 ST5P78524 1137 aa23.43■■□□□ 1.34
SRSF1-209ENST00000585096 TTLL6Q8N841 843 aa23.43■■□□□ 1.34
SRSF1-209ENST00000585096 DLG5Q8TDM6 1919 aa23.41■■□□□ 1.34
SRSF1-209ENST00000585096 C1QTNF8P60827 252 aa23.41■■□□□ 1.34
SRSF1-209ENST00000585096 NBPF5PQ86XG9 351 aaPredicted RBP23.41■■□□□ 1.34
SRSF1-209ENST00000585096 NGEFQ8N5V2 710 aa23.41■■□□□ 1.34
SRSF1-209ENST00000585096 ZNF526Q8TF50 670 aaPredicted RBP23.41■■□□□ 1.34
SRSF1-209ENST00000585096 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
SRSF1-209ENST00000585096 CCDC24Q8N4L8 307 aa23.4■■□□□ 1.34
SRSF1-209ENST00000585096 NIP7Q9Y221 180 aaKnown RBP eCLIP23.4■■□□□ 1.34
SRSF1-209ENST00000585096 KDM3BQ7LBC6 1761 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms