RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 TEFQ10587 303 aa17.72■□□□□ 0.43
SREBF1-223ENST00000584760 PARP3Q9Y6F1 533 aa17.72■□□□□ 0.43
SREBF1-223ENST00000584760 ADRA2BP18089 450 aa17.71■□□□□ 0.43
SREBF1-223ENST00000584760 CRKLP46109 303 aaKnown RBP17.71■□□□□ 0.43
SREBF1-223ENST00000584760 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
SREBF1-223ENST00000584760 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
SREBF1-223ENST00000584760 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
SREBF1-223ENST00000584760 KDM3BQ7LBC6 1761 aa17.71■□□□□ 0.43
SREBF1-223ENST00000584760 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
SREBF1-223ENST00000584760 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
SREBF1-223ENST00000584760 C9orf131Q5VYM1 1079 aa17.7■□□□□ 0.42
SREBF1-223ENST00000584760 N4BP2Q86UW6 1770 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-223ENST00000584760 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-223ENST00000584760 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
SREBF1-223ENST00000584760 KCNA3P22001 575 aa17.68■□□□□ 0.42
SREBF1-223ENST00000584760 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
SREBF1-223ENST00000584760 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
SREBF1-223ENST00000584760 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-223ENST00000584760 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
SREBF1-223ENST00000584760 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
SREBF1-223ENST00000584760 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
SREBF1-223ENST00000584760 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
SREBF1-223ENST00000584760 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-223ENST00000584760 HTRA3P83110 453 aa17.67■□□□□ 0.42
SREBF1-223ENST00000584760 MCM10Q7L590 875 aa17.67■□□□□ 0.42
SREBF1-223ENST00000584760 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
SREBF1-223ENST00000584760 RBM46Q8TBY0 533 aaKnown RBP17.67■□□□□ 0.42
SREBF1-223ENST00000584760 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-223ENST00000584760 PIM2Q9P1W9 311 aa17.67■□□□□ 0.42
SREBF1-223ENST00000584760 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
SREBF1-223ENST00000584760 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
SREBF1-223ENST00000584760 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
SREBF1-223ENST00000584760 SCN7AQ01118 1682 aa17.66■□□□□ 0.42
SREBF1-223ENST00000584760 SOS1Q07889 1333 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-223ENST00000584760 NEFMP07197 916 aa17.65■□□□□ 0.42
SREBF1-223ENST00000584760 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
SREBF1-223ENST00000584760 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
SREBF1-223ENST00000584760 FKBP8Q14318 412 aa17.64■□□□□ 0.41
SREBF1-223ENST00000584760 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
SREBF1-223ENST00000584760 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
SREBF1-223ENST00000584760 RNF181Q9P0P0 153 aa17.64■□□□□ 0.41
SREBF1-223ENST00000584760 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
SREBF1-223ENST00000584760 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
SREBF1-223ENST00000584760 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
SREBF1-223ENST00000584760 KCNQ3O43525 872 aa17.63■□□□□ 0.41
SREBF1-223ENST00000584760 CHRNA5P30532 468 aa17.63■□□□□ 0.41
SREBF1-223ENST00000584760 RRAGCQ9HB90 399 aa17.63■□□□□ 0.41
SREBF1-223ENST00000584760 KDM2BQ8NHM5 1336 aa17.63■□□□□ 0.41
SREBF1-223ENST00000584760 COL15A1P39059 1388 aa17.63■□□□□ 0.41
SREBF1-223ENST00000584760 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
SREBF1-223ENST00000584760 DDR1Q08345 913 aa17.62■□□□□ 0.41
SREBF1-223ENST00000584760 FSTL1Q12841 308 aa17.62■□□□□ 0.41
SREBF1-223ENST00000584760 KLRG1Q96E93 195 aa17.62■□□□□ 0.41
SREBF1-223ENST00000584760 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
SREBF1-223ENST00000584760 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
SREBF1-223ENST00000584760 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
SREBF1-223ENST00000584760 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-223ENST00000584760 STARD3NLO95772 234 aa17.6■□□□□ 0.41
SREBF1-223ENST00000584760 COL13A1Q5TAT6 717 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-223ENST00000584760 NRXN2Q9P2S2 1712 aa17.6■□□□□ 0.41
SREBF1-223ENST00000584760 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
SREBF1-223ENST00000584760 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-223ENST00000584760 TAF7Q15545 349 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-223ENST00000584760 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
SREBF1-223ENST00000584760 WDR90Q96KV7 1748 aa17.58■□□□□ 0.4
SREBF1-223ENST00000584760 POLRMTO00411 1230 aaKnown RBP17.57■□□□□ 0.4
SREBF1-223ENST00000584760 CAPN15O75808 1086 aa17.57■□□□□ 0.4
SREBF1-223ENST00000584760 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
SREBF1-223ENST00000584760 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
SREBF1-223ENST00000584760 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
SREBF1-223ENST00000584760 ZPR1O75312 459 aa17.56■□□□□ 0.4
SREBF1-223ENST00000584760 TM4SF1P30408 202 aa17.56■□□□□ 0.4
SREBF1-223ENST00000584760 TMPOP42166 694 aaKnown RBP17.56■□□□□ 0.4
SREBF1-223ENST00000584760 CCDC146Q8IYE0 955 aa17.56■□□□□ 0.4
SREBF1-223ENST00000584760 NARFQ9UHQ1 456 aa17.56■□□□□ 0.4
SREBF1-223ENST00000584760 PRAMEF22A3QJZ6 481 aa17.55■□□□□ 0.4
SREBF1-223ENST00000584760 RASSF7Q02833 373 aa17.55■□□□□ 0.4
SREBF1-223ENST00000584760 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
SREBF1-223ENST00000584760 SMC1BQ8NDV3 1235 aa17.55■□□□□ 0.4
SREBF1-223ENST00000584760 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
SREBF1-223ENST00000584760 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
SREBF1-223ENST00000584760 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
SREBF1-223ENST00000584760 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-223ENST00000584760 RIPK4P57078 832 aa17.54■□□□□ 0.4
SREBF1-223ENST00000584760 PNISRQ8TF01 805 aaKnown RBP17.54■□□□□ 0.4
SREBF1-223ENST00000584760 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
SREBF1-223ENST00000584760 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
SREBF1-223ENST00000584760 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
SREBF1-223ENST00000584760 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
SREBF1-223ENST00000584760 A1BGP04217 495 aa17.53■□□□□ 0.4
SREBF1-223ENST00000584760 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
SREBF1-223ENST00000584760 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
SREBF1-223ENST00000584760 TNS4Q8IZW8 715 aa17.52■□□□□ 0.4
SREBF1-223ENST00000584760 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.4
SREBF1-223ENST00000584760 A0A087WZG4 1122 aa17.51■□□□□ 0.39
SREBF1-223ENST00000584760 NFIXQ14938 502 aa17.51■□□□□ 0.39
SREBF1-223ENST00000584760 ANKRD31Q8N7Z5 1873 aa17.51■□□□□ 0.39
SREBF1-223ENST00000584760 VEGFAP15692 232 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-223ENST00000584760 LMNB1P20700 586 aa17.5■□□□□ 0.39
SREBF1-223ENST00000584760 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 424.3 ms