RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
CDK12-208ENST00000584336 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
CDK12-208ENST00000584336 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
CDK12-208ENST00000584336 CCT4P50991 539 aaKnown RBP13.11□□□□□ -0.31
CDK12-208ENST00000584336 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 BACH2Q9BYV9 841 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 DBF4Q9UBU7 674 aaPredicted RBP13.11□□□□□ -0.31
CDK12-208ENST00000584336 SPATA31A1Q5TZJ5 1347 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 RXRBP28702 533 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
CDK12-208ENST00000584336 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 ATRNO75882 1429 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 C8orf34Q49A92 452 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 BEND3Q5T5X7 828 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 PIGBQ92521 554 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
CDK12-208ENST00000584336 ASAP1Q9ULH1 1129 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
CDK12-208ENST00000584336 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
CDK12-208ENST00000584336 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
CDK12-208ENST00000584336 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
CDK12-208ENST00000584336 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 ANKRD44Q8N8A2 993 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 DNAAF4Q8WXU2 420 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDK12-208ENST00000584336 KCPQ6ZWJ8 1503 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 EXOC5O00471 708 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 ANKRD45Q5TZF3 282 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
CDK12-208ENST00000584336 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.31
CDK12-208ENST00000584336 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.31
CDK12-208ENST00000584336 A1BGP04217 495 aa13.08□□□□□ -0.32
CDK12-208ENST00000584336 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
CDK12-208ENST00000584336 NUCB1Q02818 461 aa13.08□□□□□ -0.32
CDK12-208ENST00000584336 CWF19L2Q2TBE0 894 aaKnown RBP13.08□□□□□ -0.32
CDK12-208ENST00000584336 COPS6Q7L5N1 327 aa13.08□□□□□ -0.32
CDK12-208ENST00000584336 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
CDK12-208ENST00000584336 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
CDK12-208ENST00000584336 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
CDK12-208ENST00000584336 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 APBB1O00213 710 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
CDK12-208ENST00000584336 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 SOCS7O14512 581 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
CDK12-208ENST00000584336 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
CDK12-208ENST00000584336 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 SRCIN1Q9C0H9 1055 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
CDK12-208ENST00000584336 ATG3Q9NT62 314 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
CDK12-208ENST00000584336 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
CDK12-208ENST00000584336 VPS72Q15906 364 aa13.06□□□□□ -0.32
CDK12-208ENST00000584336 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
CDK12-208ENST00000584336 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
CDK12-208ENST00000584336 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
CDK12-208ENST00000584336 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
CDK12-208ENST00000584336 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
CDK12-208ENST00000584336 HYPKQ9NX55 129 aa13.06□□□□□ -0.32
CDK12-208ENST00000584336 SEC24BO95487 1268 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
CDK12-208ENST00000584336 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
CDK12-208ENST00000584336 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
CDK12-208ENST00000584336 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 A0A0G2JS52 829 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 GNAI2P04899 355 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
CDK12-208ENST00000584336 FAM161AQ3B820 660 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
CDK12-208ENST00000584336 PXDNLA1KZ92 1463 aa13.05□□□□□ -0.32
CDK12-208ENST00000584336 ITGB4P16144 1822 aa13.04□□□□□ -0.32
CDK12-208ENST00000584336 TNS2Q63HR2 1409 aa13.04□□□□□ -0.32
CDK12-208ENST00000584336 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
CDK12-208ENST00000584336 DDB1Q16531 1140 aa13.04□□□□□ -0.32
CDK12-208ENST00000584336 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
CDK12-208ENST00000584336 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
CDK12-208ENST00000584336 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
CDK12-208ENST00000584336 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
CDK12-208ENST00000584336 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
CDK12-208ENST00000584336 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
CDK12-208ENST00000584336 RIC3Q7Z5B4 369 aa13.03□□□□□ -0.32
CDK12-208ENST00000584336 MYD88Q99836 296 aa13.03□□□□□ -0.32
CDK12-208ENST00000584336 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
CDK12-208ENST00000584336 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
CDK12-208ENST00000584336 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
CDK12-208ENST00000584336 GNAI3P08754 354 aa13.02□□□□□ -0.32
CDK12-208ENST00000584336 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
CDK12-208ENST00000584336 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
CDK12-208ENST00000584336 THRAP3Q9Y2W1 955 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms