RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
SCN4A-203ENST00000584310 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
SCN4A-203ENST00000584310 KCPQ6ZWJ8 1503 aa19.55■□□□□ 0.72
SCN4A-203ENST00000584310 COL15A1P39059 1388 aa19.55■□□□□ 0.72
SCN4A-203ENST00000584310 COL5A3P25940 1745 aaPredicted RBP19.54■□□□□ 0.72
SCN4A-203ENST00000584310 RIPK4P57078 832 aa19.54■□□□□ 0.72
SCN4A-203ENST00000584310 NLGN2Q8NFZ4 835 aa19.54■□□□□ 0.72
SCN4A-203ENST00000584310 NARFQ9UHQ1 456 aa19.53■□□□□ 0.72
SCN4A-203ENST00000584310 CICQ96RK0 1608 aaPredicted RBP19.53■□□□□ 0.72
SCN4A-203ENST00000584310 COL24A1Q17RW2 1714 aa19.53■□□□□ 0.72
SCN4A-203ENST00000584310 ANP32CO43423 234 aa19.52■□□□□ 0.72
SCN4A-203ENST00000584310 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
SCN4A-203ENST00000584310 TGFB2P61812 414 aa19.52■□□□□ 0.72
SCN4A-203ENST00000584310 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
SCN4A-203ENST00000584310 RUNDC1Q96C34 613 aa19.52■□□□□ 0.72
SCN4A-203ENST00000584310 NPHP1O15259 732 aa19.51■□□□□ 0.71
SCN4A-203ENST00000584310 SRP68Q9UHB9 627 aaKnown RBP19.51■□□□□ 0.71
SCN4A-203ENST00000584310 TJP1Q07157 1748 aa19.5■□□□□ 0.71
SCN4A-203ENST00000584310 FKBP8Q14318 412 aa19.49■□□□□ 0.71
SCN4A-203ENST00000584310 ZNF652Q9Y2D9 606 aa19.49■□□□□ 0.71
SCN4A-203ENST00000584310 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
SCN4A-203ENST00000584310 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
SCN4A-203ENST00000584310 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
SCN4A-203ENST00000584310 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
SCN4A-203ENST00000584310 BABAM1Q9NWV8 329 aa19.48■□□□□ 0.71
SCN4A-203ENST00000584310 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
SCN4A-203ENST00000584310 KCNQ3O43525 872 aa19.47■□□□□ 0.71
SCN4A-203ENST00000584310 CCDC146Q8IYE0 955 aa19.47■□□□□ 0.71
SCN4A-203ENST00000584310 A1BGP04217 495 aa19.46■□□□□ 0.71
SCN4A-203ENST00000584310 CALD1Q05682 793 aaKnown RBP19.46■□□□□ 0.71
SCN4A-203ENST00000584310 UBR2Q8IWV8 1755 aa19.46■□□□□ 0.71
SCN4A-203ENST00000584310 DZIP3Q86Y13 1208 aaKnown RBP19.45■□□□□ 0.7
SCN4A-203ENST00000584310 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
SCN4A-203ENST00000584310 ADAMTS8Q9UP79 889 aa19.45■□□□□ 0.7
SCN4A-203ENST00000584310 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
SCN4A-203ENST00000584310 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
SCN4A-203ENST00000584310 TBC1D2BQ9UPU7 963 aa19.44■□□□□ 0.7
SCN4A-203ENST00000584310 MYH14Q7Z406 1995 aaKnown RBP19.44■□□□□ 0.7
SCN4A-203ENST00000584310 SIPA1L3O60292 1781 aaPredicted RBP19.43■□□□□ 0.7
SCN4A-203ENST00000584310 TM4SF1P30408 202 aa19.43■□□□□ 0.7
SCN4A-203ENST00000584310 NFIXQ14938 502 aa19.43■□□□□ 0.7
SCN4A-203ENST00000584310 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
SCN4A-203ENST00000584310 SETDB2Q96T68 719 aa19.43■□□□□ 0.7
SCN4A-203ENST00000584310 C10orf71Q711Q0 1435 aa19.42■□□□□ 0.7
SCN4A-203ENST00000584310 POLRMTO00411 1230 aaKnown RBP19.42■□□□□ 0.7
SCN4A-203ENST00000584310 SERPINB2P05120 415 aa19.42■□□□□ 0.7
SCN4A-203ENST00000584310 BCS1LQ9Y276 419 aa19.42■□□□□ 0.7
SCN4A-203ENST00000584310 RRP7AQ9Y3A4 280 aaKnown RBP19.42■□□□□ 0.7
SCN4A-203ENST00000584310 LAS1LQ9Y4W2 734 aaKnown RBP19.42■□□□□ 0.7
SCN4A-203ENST00000584310 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
SCN4A-203ENST00000584310 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
SCN4A-203ENST00000584310 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
SCN4A-203ENST00000584310 KIF6Q6ZMV9 814 aa19.41■□□□□ 0.7
SCN4A-203ENST00000584310 PIM2Q9P1W9 311 aa19.41■□□□□ 0.7
SCN4A-203ENST00000584310 PDZRN3Q9UPQ7 1066 aa19.41■□□□□ 0.7
SCN4A-203ENST00000584310 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
SCN4A-203ENST00000584310 GIGYF1O75420 1035 aaPredicted RBP19.4■□□□□ 0.7
SCN4A-203ENST00000584310 YBX3P16989 372 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCN4A-203ENST00000584310 ST5P78524 1137 aa19.4■□□□□ 0.7
SCN4A-203ENST00000584310 DDR1Q08345 913 aa19.4■□□□□ 0.7
SCN4A-203ENST00000584310 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
SCN4A-203ENST00000584310 CARMIL3Q8ND23 1372 aa19.4■□□□□ 0.7
SCN4A-203ENST00000584310 RGL2O15211 777 aa19.39■□□□□ 0.69
SCN4A-203ENST00000584310 DPEP1P16444 411 aa19.39■□□□□ 0.69
SCN4A-203ENST00000584310 ERBB4Q15303 1308 aa19.39■□□□□ 0.69
SCN4A-203ENST00000584310 DALRD3Q5D0E6 543 aaKnown RBP19.38■□□□□ 0.69
SCN4A-203ENST00000584310 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
SCN4A-203ENST00000584310 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
SCN4A-203ENST00000584310 PRAMEF22A3QJZ6 481 aa19.37■□□□□ 0.69
SCN4A-203ENST00000584310 H0YIN7 160 aa19.37■□□□□ 0.69
SCN4A-203ENST00000584310 PDE6BP35913 854 aa19.37■□□□□ 0.69
SCN4A-203ENST00000584310 CNBD1Q8NA66 436 aa19.37■□□□□ 0.69
SCN4A-203ENST00000584310 PXDNLA1KZ92 1463 aa19.36■□□□□ 0.69
SCN4A-203ENST00000584310 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
SCN4A-203ENST00000584310 GTF2E1P29083 439 aaPredicted RBP19.36■□□□□ 0.69
SCN4A-203ENST00000584310 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
SCN4A-203ENST00000584310 TBC1D9BQ66K14 1250 aa19.36■□□□□ 0.69
SCN4A-203ENST00000584310 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
SCN4A-203ENST00000584310 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
SCN4A-203ENST00000584310 APAF1O14727 1248 aa19.35■□□□□ 0.69
SCN4A-203ENST00000584310 EIF2S2P20042 333 aaKnown RBP19.35■□□□□ 0.69
SCN4A-203ENST00000584310 NBPF5PQ86XG9 351 aaPredicted RBP19.35■□□□□ 0.69
SCN4A-203ENST00000584310 MYL6BP14649 208 aa19.34■□□□□ 0.69
SCN4A-203ENST00000584310 TPTE2Q6XPS3 522 aa19.34■□□□□ 0.69
SCN4A-203ENST00000584310 ARHGAP27Q6ZUM4 889 aa19.34■□□□□ 0.69
SCN4A-203ENST00000584310 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
SCN4A-203ENST00000584310 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.69
SCN4A-203ENST00000584310 C2CD5Q86YS7 1000 aa19.33■□□□□ 0.68
SCN4A-203ENST00000584310 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
SCN4A-203ENST00000584310 NIP7Q9Y221 180 aaKnown RBP eCLIP19.33■□□□□ 0.68
SCN4A-203ENST00000584310 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
SCN4A-203ENST00000584310 ERVV-1B6SEH8 477 aa19.32■□□□□ 0.68
SCN4A-203ENST00000584310 CHL1O00533 1208 aa19.32■□□□□ 0.68
SCN4A-203ENST00000584310 GNAI1P63096 354 aa19.32■□□□□ 0.68
SCN4A-203ENST00000584310 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
SCN4A-203ENST00000584310 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
SCN4A-203ENST00000584310 ZNF784Q8NCA9 323 aaPredicted RBP19.32■□□□□ 0.68
SCN4A-203ENST00000584310 NYXQ9GZU5 481 aa19.32■□□□□ 0.68
SCN4A-203ENST00000584310 HOXB7P09629 217 aa19.31■□□□□ 0.68
SCN4A-203ENST00000584310 TTLL6Q8N841 843 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms