RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 GYS1P13807 737 aa10.94□□□□□ -0.66
GGA3-218ENST00000584243 PLA2G5P39877 138 aa10.94□□□□□ -0.66
GGA3-218ENST00000584243 TMF1P82094 1093 aa10.94□□□□□ -0.66
GGA3-218ENST00000584243 NLGN1Q8N2Q7 840 aa10.94□□□□□ -0.66
GGA3-218ENST00000584243 CDK19Q9BWU1 502 aa10.94□□□□□ -0.66
GGA3-218ENST00000584243 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
GGA3-218ENST00000584243 GNPATO15228 680 aa10.93□□□□□ -0.66
GGA3-218ENST00000584243 ERFEQ4G0M1 354 aa10.93□□□□□ -0.66
GGA3-218ENST00000584243 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
GGA3-218ENST00000584243 SNX27Q96L92 541 aa10.93□□□□□ -0.66
GGA3-218ENST00000584243 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
GGA3-218ENST00000584243 DDR1Q08345 913 aa10.92□□□□□ -0.66
GGA3-218ENST00000584243 PARP3Q9Y6F1 533 aa10.92□□□□□ -0.66
GGA3-218ENST00000584243 ITPK1Q13572 414 aa10.91□□□□□ -0.66
GGA3-218ENST00000584243 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
GGA3-218ENST00000584243 CENPFP49454 3210 aa10.9□□□□□ -0.66
GGA3-218ENST00000584243 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 TRAF5O00463 557 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 SAPCD2Q86UD0 394 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 SUPT16HQ9Y5B9 1047 aaKnown RBP10.89□□□□□ -0.67
GGA3-218ENST00000584243 SCN11AQ9UI33 1791 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 DLEC1Q9Y238 1755 aa10.89□□□□□ -0.67
GGA3-218ENST00000584243 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
GGA3-218ENST00000584243 EPHX2P34913 555 aa10.88□□□□□ -0.67
GGA3-218ENST00000584243 KCNH5Q8NCM2 988 aa10.88□□□□□ -0.67
GGA3-218ENST00000584243 ANKRD24Q8TF21 1146 aa10.88□□□□□ -0.67
GGA3-218ENST00000584243 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
GGA3-218ENST00000584243 INSRP06213 1382 aa10.88□□□□□ -0.67
GGA3-218ENST00000584243 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
GGA3-218ENST00000584243 FER1L6Q2WGJ9 1857 aa10.87□□□□□ -0.67
GGA3-218ENST00000584243 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
GGA3-218ENST00000584243 FAM208AQ9UK61 1670 aaKnown RBP10.87□□□□□ -0.67
GGA3-218ENST00000584243 H0YGN5 161 aa10.86□□□□□ -0.67
GGA3-218ENST00000584243 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
GGA3-218ENST00000584243 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
GGA3-218ENST00000584243 SAGE1Q9NXZ1 904 aa10.86□□□□□ -0.67
GGA3-218ENST00000584243 TRPM7Q96QT4 1865 aa10.86□□□□□ -0.67
GGA3-218ENST00000584243 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
GGA3-218ENST00000584243 SOX1O00570 391 aaPredicted RBP10.85□□□□□ -0.67
GGA3-218ENST00000584243 MPRIPQ6WCQ1 1025 aa10.85□□□□□ -0.67
GGA3-218ENST00000584243 HACL1Q9UJ83 578 aa10.85□□□□□ -0.67
GGA3-218ENST00000584243 ZNF541Q9H0D2 1346 aa10.84□□□□□ -0.67
GGA3-218ENST00000584243 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
GGA3-218ENST00000584243 SIK1P57059 783 aa10.84□□□□□ -0.67
GGA3-218ENST00000584243 TRAPPC3LQ5T215 181 aa10.84□□□□□ -0.67
GGA3-218ENST00000584243 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
GGA3-218ENST00000584243 HHIPL1Q96JK4 782 aa10.84□□□□□ -0.67
GGA3-218ENST00000584243 PRKRIP1Q9H875 184 aaPredicted RBP10.84□□□□□ -0.67
GGA3-218ENST00000584243 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
GGA3-218ENST00000584243 KIAA0100Q14667 2235 aaKnown RBP10.83□□□□□ -0.68
GGA3-218ENST00000584243 PNMA8AQ86V59 439 aaPredicted RBP10.83□□□□□ -0.68
GGA3-218ENST00000584243 TTLL6Q8N841 843 aa10.83□□□□□ -0.68
GGA3-218ENST00000584243 FAM122AQ96E09 287 aa10.83□□□□□ -0.68
GGA3-218ENST00000584243 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
GGA3-218ENST00000584243 RNF186Q9NXI6 227 aa10.83□□□□□ -0.68
GGA3-218ENST00000584243 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
GGA3-218ENST00000584243 PAPPA2Q9BXP8 1791 aa10.82□□□□□ -0.68
GGA3-218ENST00000584243 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
GGA3-218ENST00000584243 POLRMTO00411 1230 aaKnown RBP10.82□□□□□ -0.68
GGA3-218ENST00000584243 TRPA1O75762 1119 aa10.82□□□□□ -0.68
GGA3-218ENST00000584243 FKBP8Q14318 412 aa10.82□□□□□ -0.68
GGA3-218ENST00000584243 KIF7Q2M1P5 1343 aa10.82□□□□□ -0.68
GGA3-218ENST00000584243 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
GGA3-218ENST00000584243 PKN2Q16513 984 aaKnown RBP10.81□□□□□ -0.68
GGA3-218ENST00000584243 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.81□□□□□ -0.68
GGA3-218ENST00000584243 SMARCC1Q92922 1105 aaPredicted RBP10.81□□□□□ -0.68
GGA3-218ENST00000584243 LRCH3Q96II8 777 aa10.81□□□□□ -0.68
GGA3-218ENST00000584243 ITGB4P16144 1822 aa10.81□□□□□ -0.68
GGA3-218ENST00000584243 NOGQ13253 232 aa10.8□□□□□ -0.68
GGA3-218ENST00000584243 AKAP4Q5JQC9 854 aa10.8□□□□□ -0.68
GGA3-218ENST00000584243 PIGBQ92521 554 aa10.8□□□□□ -0.68
GGA3-218ENST00000584243 EYSQ5T1H1 3165 aa10.8□□□□□ -0.68
GGA3-218ENST00000584243 LTN1O94822 1766 aa10.8□□□□□ -0.68
GGA3-218ENST00000584243 RBBP6Q7Z6E9 1792 aaKnown RBP10.8□□□□□ -0.68
GGA3-218ENST00000584243 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
GGA3-218ENST00000584243 RALBP1Q15311 655 aa10.79□□□□□ -0.68
GGA3-218ENST00000584243 CCDC24Q8N4L8 307 aa10.79□□□□□ -0.68
GGA3-218ENST00000584243 CARD11Q9BXL7 1154 aa10.79□□□□□ -0.68
GGA3-218ENST00000584243 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
GGA3-218ENST00000584243 RTCBQ9Y3I0 505 aaKnown RBP10.79□□□□□ -0.68
GGA3-218ENST00000584243 TTC21BQ7Z4L5 1316 aa10.79□□□□□ -0.68
GGA3-218ENST00000584243 C21orf2O43822 256 aa10.78□□□□□ -0.68
GGA3-218ENST00000584243 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
GGA3-218ENST00000584243 SYNE4Q8N205 404 aa10.78□□□□□ -0.68
GGA3-218ENST00000584243 USP31Q70CQ4 1352 aa10.77□□□□□ -0.68
GGA3-218ENST00000584243 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
GGA3-218ENST00000584243 EN2P19622 333 aaPredicted RBP10.77□□□□□ -0.69
GGA3-218ENST00000584243 TM4SF1P30408 202 aa10.77□□□□□ -0.69
GGA3-218ENST00000584243 HNRNPUQ00839 825 aaKnown RBP eCLIP10.77□□□□□ -0.69
GGA3-218ENST00000584243 FBXO46Q6PJ61 603 aaPredicted RBP10.77□□□□□ -0.69
GGA3-218ENST00000584243 TAOK3Q9H2K8 898 aa10.77□□□□□ -0.69
GGA3-218ENST00000584243 CABP1Q9NZU7 370 aa10.77□□□□□ -0.69
GGA3-218ENST00000584243 STXBP5LQ9Y2K9 1186 aa10.77□□□□□ -0.69
GGA3-218ENST00000584243 NRXN2Q9P2S2 1712 aa10.77□□□□□ -0.69
GGA3-218ENST00000584243 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.69
GGA3-218ENST00000584243 CELF2O95319 508 aaKnown RBP10.76□□□□□ -0.69
GGA3-218ENST00000584243 RFC4P35249 363 aa10.76□□□□□ -0.69
GGA3-218ENST00000584243 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms